{"id":"https://openalex.org/W2897767703","doi":"https://doi.org/10.1109/tmi.2018.2876796","title":"Automatic Needle Segmentation and Localization in MRI With 3-D Convolutional Neural Networks: Application to MRI-Targeted Prostate Biopsy","display_name":"Automatic Needle Segmentation and Localization in MRI With 3-D Convolutional Neural Networks: Application to MRI-Targeted Prostate Biopsy","publication_year":2018,"publication_date":"2018-10-18","ids":{"openalex":"https://openalex.org/W2897767703","doi":"https://doi.org/10.1109/tmi.2018.2876796","mag":"2897767703","pmid":"https://pubmed.ncbi.nlm.nih.gov/30334789"},"language":"en","primary_location":{"id":"doi:10.1109/tmi.2018.2876796","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2018.2876796","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042730944","display_name":"Alireza Mehrtash","orcid":"https://orcid.org/0000-0003-3703-5330"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Alireza Mehrtash","raw_affiliation_strings":["Department of Electrical and Computer Engineering, The University of British Columbia, Vancouver, BC, Canada"],"raw_orcid":"https://orcid.org/0000-0003-3703-5330","affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, The University of British Columbia, Vancouver, BC, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083441393","display_name":"Mohsen Ghafoorian","orcid":null},"institutions":[{"id":"https://openalex.org/I2905213637","display_name":"TomTom (Netherlands)","ror":"https://ror.org/04as6y835","country_code":"NL","type":"company","lineage":["https://openalex.org/I2905213637"]}],"countries":["NL"],"is_corresponding":false,"raw_author_name":"Mohsen Ghafoorian","raw_affiliation_strings":["TomTom, Amsterdam, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"TomTom, Amsterdam, The Netherlands","institution_ids":["https://openalex.org/I2905213637"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044575178","display_name":"Guillaume Pernelle","orcid":"https://orcid.org/0000-0003-1658-578X"},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Guillaume Pernelle","raw_affiliation_strings":["Department of Bioengineering, Imperial College London, London, U.K"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, Imperial College London, London, U.K","institution_ids":["https://openalex.org/I47508984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091177654","display_name":"Alireza Ziaei","orcid":null},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alireza Ziaei","raw_affiliation_strings":["Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075373177","display_name":"Friso G. Heslinga","orcid":"https://orcid.org/0000-0002-8383-307X"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Friso G. Heslinga","raw_affiliation_strings":["Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA"],"raw_orcid":"https://orcid.org/0000-0002-8383-307X","affiliations":[{"raw_affiliation_string":"Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030427075","display_name":"Kemal Tuncali","orcid":"https://orcid.org/0000-0003-2466-4787"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kemal Tuncali","raw_affiliation_strings":["Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031919834","display_name":"Andriy Fedorov","orcid":"https://orcid.org/0000-0003-4806-9413"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Andriy Fedorov","raw_affiliation_strings":["Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012263767","display_name":"Ron Kikinis","orcid":"https://orcid.org/0000-0001-7227-7058"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ron Kikinis","raw_affiliation_strings":["Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074518172","display_name":"Clare M. Tempany","orcid":"https://orcid.org/0000-0002-1642-9720"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Clare M. Tempany","raw_affiliation_strings":["Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102839531","display_name":"William M. Wells","orcid":"https://orcid.org/0000-0002-4279-8634"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William M. Wells","raw_affiliation_strings":["Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023095072","display_name":"Purang Abolmaesumi","orcid":"https://orcid.org/0000-0002-7259-8609"},"institutions":[{"id":"https://openalex.org/I141945490","display_name":"University of British Columbia","ror":"https://ror.org/03rmrcq20","country_code":"CA","type":"education","lineage":["https://openalex.org/I141945490"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Purang Abolmaesumi","raw_affiliation_strings":["Department of Electrical and Computer Engineering, The University of British Columbia Vancouver, BC, Canada"],"raw_orcid":"https://orcid.org/0000-0002-7259-8609","affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, The University of British Columbia Vancouver, BC, Canada","institution_ids":["https://openalex.org/I141945490"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091681491","display_name":"Tina Kapur","orcid":"https://orcid.org/0000-0003-3646-9508"},"institutions":[{"id":"https://openalex.org/I1283280774","display_name":"Brigham and Women's Hospital","ror":"https://ror.org/04b6nzv94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1283280774","https://openalex.org/I48633490"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tina Kapur","raw_affiliation_strings":["Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA"],"raw_orcid":"https://orcid.org/0000-0003-3646-9508","affiliations":[{"raw_affiliation_string":"Department of Radiology, Brigham and Women\u2019s Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Department of Radiology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA","institution_ids":["https://openalex.org/I1283280774","https://openalex.org/I136199984"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":2645,"currency":"USD","value_usd":2645},"apc_paid":null,"fwci":3.0689,"has_fulltext":false,"cited_by_count":69,"citation_normalized_percentile":{"value":0.9245058,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"38","issue":"4","first_page":"1026","last_page":"1036"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12549","display_name":"Image and Object Detection Techniques","score":0.9901000261306763,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.7235004901885986},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6111021041870117},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.602141797542572},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6018017530441284},{"id":"https://openalex.org/keywords/prostate-biopsy","display_name":"Prostate biopsy","score":0.5448288321495056},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.488309383392334},{"id":"https://openalex.org/keywords/trajectory","display_name":"Trajectory","score":0.4606359899044037},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.45747989416122437},{"id":"https://openalex.org/keywords/biopsy","display_name":"Biopsy","score":0.4570794403553009},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.4388725757598877},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.43512430787086487},{"id":"https://openalex.org/keywords/prostate","display_name":"Prostate","score":0.38663703203201294},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.37181442975997925},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.36185261607170105}],"concepts":[{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.7235004901885986},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6111021041870117},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.602141797542572},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6018017530441284},{"id":"https://openalex.org/C2781217009","wikidata":"https://www.wikidata.org/wiki/Q4086927","display_name":"Prostate biopsy","level":4,"score":0.5448288321495056},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.488309383392334},{"id":"https://openalex.org/C13662910","wikidata":"https://www.wikidata.org/wiki/Q193139","display_name":"Trajectory","level":2,"score":0.4606359899044037},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.45747989416122437},{"id":"https://openalex.org/C2775934546","wikidata":"https://www.wikidata.org/wiki/Q179991","display_name":"Biopsy","level":2,"score":0.4570794403553009},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.4388725757598877},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.43512430787086487},{"id":"https://openalex.org/C2776235491","wikidata":"https://www.wikidata.org/wiki/Q9625","display_name":"Prostate","level":3,"score":0.38663703203201294},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.37181442975997925},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.36185261607170105},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C1276947","wikidata":"https://www.wikidata.org/wiki/Q333","display_name":"Astronomy","level":1,"score":0.0},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011467","descriptor_name":"Prostate","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D011467","descriptor_name":"Prostate","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D011467","descriptor_name":"Prostate","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D011467","descriptor_name":"Prostate","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D011467","descriptor_name":"Prostate","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D011467","descriptor_name":"Prostate","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D061705","descriptor_name":"Image-Guided Biopsy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D061705","descriptor_name":"Image-Guided Biopsy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D061705","descriptor_name":"Image-Guided Biopsy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1109/tmi.2018.2876796","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2018.2876796","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},{"id":"pmid:30334789","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30334789","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on medical imaging","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:5435661","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6450731","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1734113094","display_name":"Multidisciplinary Training in Image Guided Therapy","funder_award_id":"5r25ca089017-15","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3502978177","display_name":null,"funder_award_id":"R25 CA089017","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G552706917","display_name":null,"funder_award_id":"P41-EB-015898","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G7989802094","display_name":"Image Guided Therapy Center - Ultrasound-based sensor system for the monitoring of COVID-19 patients","funder_award_id":"3p41eb015898-15s1","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320334506","display_name":"Canadian Institutes of Health Research","ror":"https://ror.org/01gavpb45"},{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":75,"referenced_works":["https://openalex.org/W128538854","https://openalex.org/W1522301498","https://openalex.org/W1568793698","https://openalex.org/W1572063013","https://openalex.org/W1677182931","https://openalex.org/W1836465849","https://openalex.org/W1901129140","https://openalex.org/W1903029394","https://openalex.org/W1937255649","https://openalex.org/W1978761040","https://openalex.org/W1980245127","https://openalex.org/W1982333157","https://openalex.org/W1989403098","https://openalex.org/W2009499002","https://openalex.org/W2017756316","https://openalex.org/W2028911404","https://openalex.org/W2040378385","https://openalex.org/W2041352300","https://openalex.org/W2064130501","https://openalex.org/W2064716784","https://openalex.org/W2080725537","https://openalex.org/W2087795629","https://openalex.org/W2098237035","https://openalex.org/W2114856020","https://openalex.org/W2121042837","https://openalex.org/W2130787037","https://openalex.org/W2141941142","https://openalex.org/W2143506132","https://openalex.org/W2153392724","https://openalex.org/W2170864001","https://openalex.org/W2171740948","https://openalex.org/W2271840356","https://openalex.org/W2284436357","https://openalex.org/W2327793514","https://openalex.org/W2395611524","https://openalex.org/W2440331874","https://openalex.org/W2464708700","https://openalex.org/W2513810319","https://openalex.org/W2521068627","https://openalex.org/W2532750509","https://openalex.org/W2542911914","https://openalex.org/W2570618306","https://openalex.org/W2575657035","https://openalex.org/W2577453388","https://openalex.org/W2583371131","https://openalex.org/W2590651460","https://openalex.org/W2592069135","https://openalex.org/W2592929672","https://openalex.org/W2594179300","https://openalex.org/W2594499462","https://openalex.org/W2605159090","https://openalex.org/W2607418021","https://openalex.org/W2621505005","https://openalex.org/W2736940825","https://openalex.org/W2742840393","https://openalex.org/W2765659259","https://openalex.org/W2791142503","https://openalex.org/W2800850596","https://openalex.org/W2915478882","https://openalex.org/W2946728743","https://openalex.org/W2948436157","https://openalex.org/W2949117887","https://openalex.org/W2951234442","https://openalex.org/W2954191198","https://openalex.org/W2962914239","https://openalex.org/W2963881378","https://openalex.org/W2969478681","https://openalex.org/W2983154041","https://openalex.org/W3100715778","https://openalex.org/W3102109558","https://openalex.org/W3104085283","https://openalex.org/W6639824700","https://openalex.org/W6685261749","https://openalex.org/W6733991528","https://openalex.org/W6742084806"],"related_works":["https://openalex.org/W2566665866","https://openalex.org/W2358184952","https://openalex.org/W3115500073","https://openalex.org/W3096156950","https://openalex.org/W1606407388","https://openalex.org/W3197418554","https://openalex.org/W2353816345","https://openalex.org/W1725314107","https://openalex.org/W2974806603","https://openalex.org/W2032235093"],"abstract_inverted_index":{"Image":[0],"guidance":[1],"improves":[2],"tissue":[3],"sampling":[4],"during":[5],"biopsy":[6,19,129],"by":[7,199],"allowing":[8],"the":[9,13,18,23,57,69,76,86,146,168,205,211,214,223,228,232,239],"physician":[10],"to":[11,22,204,222],"visualize":[12],"tip":[14,42,107,182],"and":[15,43,46,54,84,97,108,142,160,184],"trajectory":[16,44,109,188],"of":[17,59,71,99,167,213,231],"needle":[20,41,120,181,187],"relative":[21],"target":[24],"in":[25,48,56,65,101,180,186,195,243],"MRI,":[26],"CT,":[27],"ultrasound,":[28],"or":[29],"other":[30],"relevant":[31],"imagery.":[32],"This":[33],"paper":[34],"reports":[35],"a":[36,200],"system":[37,79,89,237],"for":[38,80,95,122,241],"fast":[39],"automatic":[40],"localization":[45,98],"visualization":[47],"MRI":[49,102,116],"that":[50,90],"has":[51,238],"been":[52],"developed":[53],"tested":[55,172],"context":[58],"an":[60],"active":[61],"clinical":[62,82,229,244],"research":[63],"program":[64],"prostate":[66],"biopsy.":[67],"To":[68],"best":[70],"our":[72,132],"knowledge,":[73],"this":[74,81],"is":[75],"first":[77,87],"reported":[78,88],"application":[83],"also":[85],"leverages":[91],"deep":[92,150],"neural":[93,154],"networks":[94],"segmentation":[96],"needles":[100],"across":[103],"biomedical":[104],"applications.":[105],"Needle":[106],"were":[110,136,208],"annotated":[111],"on":[112,162,173],"583":[113],"T2-weighted":[114],"intra-procedural":[115],"scans":[117],"acquired":[118],"after":[119],"insertion":[121],"71":[123],"patients":[124],"who":[125],"underwent":[126],"transperineal":[127],"MRI-targeted":[128],"procedure":[130],"at":[131,145],"institution.":[133],"The":[134,165,217,235],"images":[135],"divided":[137],"into":[138],"two":[139],"independent":[140,197],"training-validation":[141],"test":[143],"sets":[144],"patient":[147],"level.":[148],"A":[149],"3-D":[151],"fully":[152],"convolutional":[153],"network":[155],"model":[156],"was":[157,177,193,220],"developed,":[158],"trained,":[159],"deployed":[161],"these":[163],"samples.":[164],"accuracy":[166],"proposed":[169,215,233,236],"method,":[170],"as":[171],"previously":[174],"unseen":[175],"data,":[176],"2.80-mm":[178],"average":[179],"detection":[183],"0.98\u00b0":[185],"angle.":[189],"An":[190],"observer":[191],"study":[192],"designed":[194],"which":[196],"annotations":[198],"second":[201],"observer,":[202,207],"blinded":[203],"original":[206],"compared":[209],"with":[210],"output":[212],"method.":[216,234],"resultant":[218],"error":[219],"comparable":[221],"measured":[224],"inter-observer":[225],"concordance,":[226],"reinforcing":[227],"acceptability":[230],"potential":[240],"deployment":[242],"routine.":[245]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":15},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":10},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":6}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
