{"id":"https://openalex.org/W2046758959","doi":"https://doi.org/10.1109/tmi.2011.2165294","title":"Estimation of Mouse Organ Locations Through Registration of a Statistical Mouse Atlas With Micro-CT Images","display_name":"Estimation of Mouse Organ Locations Through Registration of a Statistical Mouse Atlas With Micro-CT Images","publication_year":2011,"publication_date":"2011-08-25","ids":{"openalex":"https://openalex.org/W2046758959","doi":"https://doi.org/10.1109/tmi.2011.2165294","mag":"2046758959","pmid":"https://pubmed.ncbi.nlm.nih.gov/21859613"},"language":"en","primary_location":{"id":"doi:10.1109/tmi.2011.2165294","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2011.2165294","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3267384","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010996024","display_name":"Hongkai Wang","orcid":"https://orcid.org/0000-0002-1813-2162"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hongkai Wang","raw_affiliation_strings":["Crump Institute of Molecular Imaging, David Geffen School of Medicine, University of California, Los Angeles, CA 90066, USA. wang.hongkai@gmail.com","David Geffen School of Medicine, University of California/Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Crump Institute of Molecular Imaging, David Geffen School of Medicine, University of California, Los Angeles, CA 90066, USA. wang.hongkai@gmail.com","institution_ids":["https://openalex.org/I161318765"]},{"raw_affiliation_string":"David Geffen School of Medicine, University of California/Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106084235","display_name":"David B. Stout","orcid":null},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David B. Stout","raw_affiliation_strings":["Crump Institute of Molecular Imaging, David Geffen School of Medicine, University of California, Los Angeles, CA, USA","David Geffen School of Medicine, University of California/Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Crump Institute of Molecular Imaging, David Geffen School of Medicine, University of California, Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]},{"raw_affiliation_string":"David Geffen School of Medicine, University of California/Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054681352","display_name":"Arion F. Chatziioannou","orcid":null},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arion F. Chatziioannou","raw_affiliation_strings":["Crump Institute of Molecular Imaging, David Geffen School of Medicine, University of California, Los Angeles, CA, USA","David Geffen School of Medicine, University of California/Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Crump Institute of Molecular Imaging, David Geffen School of Medicine, University of California, Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]},{"raw_affiliation_string":"David Geffen School of Medicine, University of California/Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I161318765"],"apc_list":null,"apc_paid":null,"fwci":3.7598,"has_fulltext":false,"cited_by_count":56,"citation_normalized_percentile":{"value":0.92556034,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"31","issue":"1","first_page":"88","last_page":"102"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9937999844551086,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9919000267982483,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6325756907463074},{"id":"https://openalex.org/keywords/contrast","display_name":"Contrast (vision)","score":0.6150205731391907},{"id":"https://openalex.org/keywords/s\u00f8rensen\u2013dice-coefficient","display_name":"S\u00f8rensen\u2013Dice coefficient","score":0.586391031742096},{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.575684666633606},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5172606110572815},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4982869625091553},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4232056736946106},{"id":"https://openalex.org/keywords/gaussian","display_name":"Gaussian","score":0.41278302669525146},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.3593881130218506},{"id":"https://openalex.org/keywords/nuclear-medicine","display_name":"Nuclear medicine","score":0.351850688457489},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.34236860275268555},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.3196543753147125},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1961565911769867},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.19007322192192078},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.15057522058486938},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.094930499792099}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6325756907463074},{"id":"https://openalex.org/C2776502983","wikidata":"https://www.wikidata.org/wiki/Q690182","display_name":"Contrast (vision)","level":2,"score":0.6150205731391907},{"id":"https://openalex.org/C163892561","wikidata":"https://www.wikidata.org/wiki/Q2613728","display_name":"S\u00f8rensen\u2013Dice coefficient","level":4,"score":0.586391031742096},{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.575684666633606},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5172606110572815},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4982869625091553},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4232056736946106},{"id":"https://openalex.org/C163716315","wikidata":"https://www.wikidata.org/wiki/Q901177","display_name":"Gaussian","level":2,"score":0.41278302669525146},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.3593881130218506},{"id":"https://openalex.org/C2989005","wikidata":"https://www.wikidata.org/wiki/Q214963","display_name":"Nuclear medicine","level":1,"score":0.351850688457489},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.34236860275268555},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.3196543753147125},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1961565911769867},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.19007322192192078},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.15057522058486938},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.094930499792099},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001842","descriptor_name":"Bone and Bones","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001842","descriptor_name":"Bone and Bones","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001842","descriptor_name":"Bone and Bones","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001842","descriptor_name":"Bone and Bones","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006321","descriptor_name":"Heart","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006321","descriptor_name":"Heart","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006321","descriptor_name":"Heart","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006321","descriptor_name":"Heart","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007668","descriptor_name":"Kidney","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D007668","descriptor_name":"Kidney","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D007668","descriptor_name":"Kidney","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D007668","descriptor_name":"Kidney","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008099","descriptor_name":"Liver","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008168","descriptor_name":"Lung","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008810","descriptor_name":"Mice, Inbred C57BL","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008810","descriptor_name":"Mice, Inbred C57BL","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008810","descriptor_name":"Mice, Inbred C57BL","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008810","descriptor_name":"Mice, Inbred C57BL","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008819","descriptor_name":"Mice, Nude","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008819","descriptor_name":"Mice, Nude","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008819","descriptor_name":"Mice, Nude","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008819","descriptor_name":"Mice, Nude","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013154","descriptor_name":"Spleen","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D013154","descriptor_name":"Spleen","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D013154","descriptor_name":"Spleen","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D013154","descriptor_name":"Spleen","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D016513","descriptor_name":"Mice, SCID","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016513","descriptor_name":"Mice, SCID","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016513","descriptor_name":"Mice, SCID","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016513","descriptor_name":"Mice, SCID","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025341","descriptor_name":"Principal Component Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D051598","descriptor_name":"Whole Body Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D051598","descriptor_name":"Whole Body Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D051598","descriptor_name":"Whole Body Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D051598","descriptor_name":"Whole Body Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055114","descriptor_name":"X-Ray Microtomography","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055114","descriptor_name":"X-Ray Microtomography","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055114","descriptor_name":"X-Ray Microtomography","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055114","descriptor_name":"X-Ray Microtomography","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1109/tmi.2011.2165294","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2011.2165294","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},{"id":"pmid:21859613","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21859613","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on medical imaging","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3267384","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3267384","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Med Imaging","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:3267384","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3267384","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Med Imaging","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4391804368","display_name":null,"funder_award_id":"U24 CA092865","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G4940296118","display_name":null,"funder_award_id":"2U24 CA092865","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"}],"funders":[{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":71,"referenced_works":["https://openalex.org/W1501724268","https://openalex.org/W1507992710","https://openalex.org/W1547035658","https://openalex.org/W1549986979","https://openalex.org/W1562856279","https://openalex.org/W1565722771","https://openalex.org/W1964791943","https://openalex.org/W1965070352","https://openalex.org/W1974650920","https://openalex.org/W1975015052","https://openalex.org/W1977315624","https://openalex.org/W1982675592","https://openalex.org/W1994835334","https://openalex.org/W1997536570","https://openalex.org/W1997545322","https://openalex.org/W2004762562","https://openalex.org/W2008290507","https://openalex.org/W2015628184","https://openalex.org/W2016991777","https://openalex.org/W2017645750","https://openalex.org/W2019720796","https://openalex.org/W2022679298","https://openalex.org/W2032470602","https://openalex.org/W2034522254","https://openalex.org/W2037695669","https://openalex.org/W2045784023","https://openalex.org/W2048728943","https://openalex.org/W2049503784","https://openalex.org/W2050542229","https://openalex.org/W2055894011","https://openalex.org/W2061225455","https://openalex.org/W2062334174","https://openalex.org/W2066663694","https://openalex.org/W2071128523","https://openalex.org/W2083003391","https://openalex.org/W2084063088","https://openalex.org/W2085873825","https://openalex.org/W2087328731","https://openalex.org/W2096063278","https://openalex.org/W2104276184","https://openalex.org/W2109759912","https://openalex.org/W2109906982","https://openalex.org/W2110623191","https://openalex.org/W2113137767","https://openalex.org/W2114726612","https://openalex.org/W2120804060","https://openalex.org/W2125201914","https://openalex.org/W2132074652","https://openalex.org/W2139958836","https://openalex.org/W2140041425","https://openalex.org/W2143781397","https://openalex.org/W2148522252","https://openalex.org/W2155174544","https://openalex.org/W2162140684","https://openalex.org/W2165706102","https://openalex.org/W2165844313","https://openalex.org/W2166796054","https://openalex.org/W2167557725","https://openalex.org/W2170974882","https://openalex.org/W2171490473","https://openalex.org/W2229412420","https://openalex.org/W2235901111","https://openalex.org/W2246912507","https://openalex.org/W2750196609","https://openalex.org/W3142121078","https://openalex.org/W4233857083","https://openalex.org/W4238805501","https://openalex.org/W4256221580","https://openalex.org/W6632499662","https://openalex.org/W6684676927","https://openalex.org/W6690995790"],"related_works":["https://openalex.org/W2011187995","https://openalex.org/W2314146950","https://openalex.org/W2373521488","https://openalex.org/W2803101231","https://openalex.org/W4284509","https://openalex.org/W606911313","https://openalex.org/W4229506690","https://openalex.org/W638747717","https://openalex.org/W4243557525","https://openalex.org/W2157102420"],"abstract_inverted_index":{"Micro-CT":[0],"is":[1,29,240],"widely":[2],"used":[3,68,148,262,282,302],"in":[4,16,44,93,303],"preclinical":[5],"studies":[6],"of":[7,20,51,211,251,258,273,317,321],"small":[8],"animals.":[9],"Due":[10],"to":[11,69,162,181,200],"the":[12,41,90,100,105,112,116,160,167,169,179,186,188,198,206,212,225,229,233,237,244,249,252,274,284,295,311,315,319],"low":[13],"soft-tissue":[14],"contrast":[15],"typical":[17],"studies,":[18],"segmentation":[19],"soft":[21],"tissue":[22],"organs":[23,43,54,79,92,107,114],"from":[24,111,155,174,192],"noncontrast":[25],"enhanced":[26],"micro-CT":[27,46,94,132],"images":[28,95],"a":[30,83],"challenging":[31],"problem.":[32],"Here,":[33],"we":[34],"propose":[35],"an":[36,271],"atlas-based":[37,289],"approach":[38],"for":[39,149,159,166,178,185,197,205,263,283],"estimating":[40],"major":[42,52],"mouse":[45,222,304],"images.":[47,133],"A":[48],"statistical":[49,63,101,213,238,288,312],"atlas":[50,214,239,264,285,305,313],"trunk":[53],"was":[55,67,123,215,291],"constructed":[56],"based":[57,125,298],"on":[58,126],"45":[59,130],"training":[60,253,259,279],"subjects.":[61],"The":[62,74,120,151,208,268,287,307],"shape":[64,75,102],"model":[65],"technique":[66],"include":[70],"inter-subject":[71],"anatomical":[72],"variations.":[73],"correlations":[76],"between":[77],"different":[78,135,256],"were":[80,96,108,147,261,281],"described":[81],"using":[82,115],"conditional":[84,117],"Gaussian":[85,118],"model.":[86,119],"For":[87],"registration,":[88,300],"first":[89],"high-contrast":[91,113],"registered":[97],"by":[98],"fitting":[99],"model,":[103],"while":[104],"low-contrast":[106,322],"subsequently":[109],"estimated":[110],"registration":[121,209,275,290],"accuracy":[122,136,210,276],"validated":[124],"23":[127],"noncontrast-enhanced":[128],"and":[129,144,228,232,266],"contrast-enhanced":[131],"Three":[134],"metrics":[137],"(Dice":[138],"coefficient,":[139,143],"organ":[140],"volume":[141,170],"recovery":[142,171],"surface":[145,189],"distance)":[146],"evaluation.":[150],"Dice":[152],"coefficients":[153,172],"vary":[154,173,191],"0.45":[156],"\u00b1":[157,164,176,183,194,202],"0.18":[158,193],"spleen":[161],"0.90":[163],"0.02":[165],"lungs,":[168],"0.96":[175],"0.10":[177],"liver":[180],"1.30":[182],"0.75":[184],"spleen,":[187],"distances":[190],"0.01":[195],"mm":[196,204],"lungs":[199],"0.72":[201],"0.42":[203],"spleen.":[207],"compared":[216,293],"with":[217,294],"two":[218],"publicly":[219],"available":[220],"single-subject":[221],"atlases,":[223],"i.e.,":[224],"MOBY":[226],"phantom":[227],"DIGIMOUSE":[230],"atlas,":[231],"results":[234,269,308],"proved":[235],"that":[236,310],"more":[241,278],"accurate":[242],"than":[243],"single":[245],"atlases.":[246],"To":[247],"evaluate":[248],"influence":[250],"subject":[254],"size,":[255],"numbers":[257],"subjects":[260,280],"construction":[265],"registration.":[267,306],"showed":[270],"improvement":[272],"when":[277],"construction.":[286],"also":[292],"thin-plate":[296],"spline":[297],"deformable":[299],"commonly":[301],"revealed":[309],"has":[314],"advantage":[316],"improving":[318],"estimation":[320],"organs.":[323]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":5},{"year":2022,"cited_by_count":4},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":10},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":6}],"updated_date":"2026-06-26T08:34:08.712188","created_date":"2025-10-10T00:00:00"}