{"id":"https://openalex.org/W2107804262","doi":"https://doi.org/10.1109/tmi.2008.2011522","title":"A Unified Framework for Automated 3-D Segmentation of Surface-Stained Living Cells and a Comprehensive Segmentation Evaluation","display_name":"A Unified Framework for Automated 3-D Segmentation of Surface-Stained Living Cells and a Comprehensive Segmentation Evaluation","publication_year":2009,"publication_date":"2009-01-16","ids":{"openalex":"https://openalex.org/W2107804262","doi":"https://doi.org/10.1109/tmi.2008.2011522","mag":"2107804262","pmid":"https://pubmed.ncbi.nlm.nih.gov/19131295"},"language":"en","primary_location":{"id":"doi:10.1109/tmi.2008.2011522","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2008.2011522","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://dr.ntu.edu.sg/bitstream/10356/91402/1/erlend1.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5064305231","display_name":"Erlend Hodneland","orcid":"https://orcid.org/0000-0003-2828-1521"},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"E. Hodneland","raw_affiliation_strings":["Department of Biomedicine, University of Bergen, 5009 Bergen, Norway. erlend.hodneland@biomed.uib.no","Dept. of Biomedicine, Univ. of Bergen, Bergen"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedicine, University of Bergen, 5009 Bergen, Norway. erlend.hodneland@biomed.uib.no","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Dept. of Biomedicine, Univ. of Bergen, Bergen","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042328893","display_name":"Nickolay V. Bukoreshtliev","orcid":null},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"N.V. Bukoreshtliev","raw_affiliation_strings":["Department of Biomedicine, University of Bergen, Bergen, Norway","Dept. of Biomedicine, Univ. of Bergen, Bergen"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedicine, University of Bergen, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Dept. of Biomedicine, Univ. of Bergen, Bergen","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041758149","display_name":"Tilo Wolf Eichler","orcid":null},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"T.W. Eichler","raw_affiliation_strings":["Department of Biomedicine, University of Bergen, Bergen, Norway","Dept. of Biomedicine, Univ. of Bergen, Bergen"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedicine, University of Bergen, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Dept. of Biomedicine, Univ. of Bergen, Bergen","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101951979","display_name":"Xue\u2010Cheng Tai","orcid":"https://orcid.org/0000-0003-3359-9104"},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Xue-Cheng Tai","raw_affiliation_strings":["Department of Mathematics, University of Bergen, Bergen, Norway","Dept. of Math., Univ. of Bergen, Bergen"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Bergen, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Dept. of Math., Univ. of Bergen, Bergen","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089918735","display_name":"Steffen Gurke","orcid":null},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"S. Gurke","raw_affiliation_strings":["Department of Biomedicine, University of Bergen, Bergen, Norway","Dept. of Biomedicine, Univ. of Bergen, Bergen"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedicine, University of Bergen, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Dept. of Biomedicine, Univ. of Bergen, Bergen","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060325633","display_name":"Arvid Lundervold","orcid":"https://orcid.org/0000-0002-0032-4182"},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"A. Lundervold","raw_affiliation_strings":["Department of Biomedicine, University of Bergen, Bergen, Norway","Dept. of Biomedicine, Univ. of Bergen, Bergen"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedicine, University of Bergen, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Dept. of Biomedicine, Univ. of Bergen, Bergen","institution_ids":["https://openalex.org/I4432739"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110168057","display_name":"H. Gerdes","orcid":null},"institutions":[{"id":"https://openalex.org/I4432739","display_name":"University of Bergen","ror":"https://ror.org/03zga2b32","country_code":"NO","type":"education","lineage":["https://openalex.org/I4432739"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"H.-H. Gerdes","raw_affiliation_strings":["Department of Biomedicine, University of Bergen, Bergen, Norway","Dept. of Biomedicine, Univ. of Bergen, Bergen"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedicine, University of Bergen, Bergen, Norway","institution_ids":["https://openalex.org/I4432739"]},{"raw_affiliation_string":"Dept. of Biomedicine, Univ. of Bergen, Bergen","institution_ids":["https://openalex.org/I4432739"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I4432739"],"apc_list":null,"apc_paid":null,"fwci":2.5761,"has_fulltext":true,"cited_by_count":37,"citation_normalized_percentile":{"value":0.89675711,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"28","issue":"5","first_page":"720","last_page":"738"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.8729761242866516},{"id":"https://openalex.org/keywords/scale-space-segmentation","display_name":"Scale-space segmentation","score":0.7272869348526001},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.7108905911445618},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6831004023551941},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6660510301589966},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.6484771966934204},{"id":"https://openalex.org/keywords/segmentation-based-object-categorization","display_name":"Segmentation-based object categorization","score":0.5972496271133423},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4933079779148102},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4783841371536255},{"id":"https://openalex.org/keywords/ridge","display_name":"Ridge","score":0.45181918144226074},{"id":"https://openalex.org/keywords/region-growing","display_name":"Region growing","score":0.4501703083515167},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.08603784441947937},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.06428709626197815}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.8729761242866516},{"id":"https://openalex.org/C65885262","wikidata":"https://www.wikidata.org/wiki/Q7429708","display_name":"Scale-space segmentation","level":4,"score":0.7272869348526001},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.7108905911445618},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6831004023551941},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6660510301589966},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.6484771966934204},{"id":"https://openalex.org/C25694479","wikidata":"https://www.wikidata.org/wiki/Q7446278","display_name":"Segmentation-based object categorization","level":5,"score":0.5972496271133423},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4933079779148102},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4783841371536255},{"id":"https://openalex.org/C32277403","wikidata":"https://www.wikidata.org/wiki/Q740445","display_name":"Ridge","level":2,"score":0.45181918144226074},{"id":"https://openalex.org/C206824153","wikidata":"https://www.wikidata.org/wiki/Q1169834","display_name":"Region growing","level":5,"score":0.4501703083515167},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.08603784441947937},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.06428709626197815},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002462","descriptor_name":"Cell Membrane","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D002462","descriptor_name":"Cell Membrane","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D002462","descriptor_name":"Cell Membrane","qualifier_ui":"Q000648","qualifier_name":"ultrastructure","is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005456","descriptor_name":"Fluorescent Dyes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005456","descriptor_name":"Fluorescent Dyes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005456","descriptor_name":"Fluorescent Dyes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013382","descriptor_name":"Subtraction Technique","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013382","descriptor_name":"Subtraction Technique","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013382","descriptor_name":"Subtraction Technique","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016011","descriptor_name":"Normal Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016011","descriptor_name":"Normal Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016011","descriptor_name":"Normal Distribution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016716","descriptor_name":"PC12 Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016716","descriptor_name":"PC12 Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016716","descriptor_name":"PC12 Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1109/tmi.2008.2011522","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tmi.2008.2011522","pdf_url":null,"source":{"id":"https://openalex.org/S58069681","display_name":"IEEE Transactions on Medical Imaging","issn_l":"0278-0062","issn":["0278-0062","1558-254X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Medical Imaging","raw_type":"journal-article"},{"id":"pmid:19131295","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19131295","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on medical imaging","raw_type":null},{"id":"pmh:oai:dr.ntu.edu.sg:10356/91402","is_oa":true,"landing_page_url":"http://hdl.handle.net/10220/6055","pdf_url":"https://dr.ntu.edu.sg/bitstream/10356/91402/1/erlend1.pdf","source":{"id":"https://openalex.org/S4306402609","display_name":"DR-NTU (Nanyang Technological University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I172675005","host_organization_name":"Nanyang Technological University","host_organization_lineage":["https://openalex.org/I172675005"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"}],"best_oa_location":{"id":"pmh:oai:dr.ntu.edu.sg:10356/91402","is_oa":true,"landing_page_url":"http://hdl.handle.net/10220/6055","pdf_url":"https://dr.ntu.edu.sg/bitstream/10356/91402/1/erlend1.pdf","source":{"id":"https://openalex.org/S4306402609","display_name":"DR-NTU (Nanyang Technological University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I172675005","host_organization_name":"Nanyang Technological University","host_organization_lineage":["https://openalex.org/I172675005"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320310758","display_name":"Kreftforeningen","ror":"https://ror.org/01925vb10"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320323078","display_name":"Universitetet i Bergen","ror":"https://ror.org/03zga2b32"},{"id":"https://openalex.org/F4320323299","display_name":"Norges Forskningsr\u00e5d","ror":"https://ror.org/00epmv149"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2107804262.pdf","grobid_xml":"https://content.openalex.org/works/W2107804262.grobid-xml"},"referenced_works_count":66,"referenced_works":["https://openalex.org/W108051244","https://openalex.org/W654264093","https://openalex.org/W1492395945","https://openalex.org/W1495971627","https://openalex.org/W1522196789","https://openalex.org/W1536200267","https://openalex.org/W1543214292","https://openalex.org/W1545467875","https://openalex.org/W1567775606","https://openalex.org/W1571699948","https://openalex.org/W1579559187","https://openalex.org/W1601528224","https://openalex.org/W1607778685","https://openalex.org/W1652775531","https://openalex.org/W1733025682","https://openalex.org/W1964662473","https://openalex.org/W1964806616","https://openalex.org/W1968056609","https://openalex.org/W1979432452","https://openalex.org/W1987549649","https://openalex.org/W2004369799","https://openalex.org/W2010308130","https://openalex.org/W2021744742","https://openalex.org/W2054821087","https://openalex.org/W2069571516","https://openalex.org/W2069709257","https://openalex.org/W2076927398","https://openalex.org/W2087449196","https://openalex.org/W2091585872","https://openalex.org/W2093354131","https://openalex.org/W2101211008","https://openalex.org/W2103870502","https://openalex.org/W2108944658","https://openalex.org/W2109200236","https://openalex.org/W2110218375","https://openalex.org/W2111358200","https://openalex.org/W2111983243","https://openalex.org/W2115149094","https://openalex.org/W2116018917","https://openalex.org/W2122661899","https://openalex.org/W2124260943","https://openalex.org/W2125173890","https://openalex.org/W2127083748","https://openalex.org/W2127895796","https://openalex.org/W2129534965","https://openalex.org/W2130785652","https://openalex.org/W2131006320","https://openalex.org/W2131194303","https://openalex.org/W2136664902","https://openalex.org/W2136962287","https://openalex.org/W2137113506","https://openalex.org/W2139418149","https://openalex.org/W2139802966","https://openalex.org/W2151257174","https://openalex.org/W2159834125","https://openalex.org/W2162245111","https://openalex.org/W2163612361","https://openalex.org/W2169122219","https://openalex.org/W2403959849","https://openalex.org/W4236844765","https://openalex.org/W4237148067","https://openalex.org/W4285719527","https://openalex.org/W6629226808","https://openalex.org/W6632688205","https://openalex.org/W6636262459","https://openalex.org/W6713437145"],"related_works":["https://openalex.org/W3144569342","https://openalex.org/W2394279717","https://openalex.org/W2551987074","https://openalex.org/W2364730859","https://openalex.org/W2386644571","https://openalex.org/W2185902295","https://openalex.org/W2055202857","https://openalex.org/W2103507220","https://openalex.org/W2372421320","https://openalex.org/W4313052709"],"abstract_inverted_index":{"This":[0,64],"work":[1],"presents":[2],"a":[3,37,60,94],"unified":[4],"framework":[5],"for":[6,48],"whole":[7],"cell":[8,34,71],"segmentation":[9,38,41,49,54],"of":[10,19,24,55,68,97],"surface":[11],"stained":[12],"living":[13,101],"cells":[14],"from":[15,43,100],"3-D":[16],"data":[17,58],"sets":[18],"fluorescent":[20],"images.":[21],"Every":[22],"step":[23],"the":[25,56,69,74],"process":[26],"is":[27],"described,":[28],"image":[29],"acquisition,":[30],"prefiltering,":[31],"ridge":[32],"enhancement,":[33],"segmentation,":[35],"and":[36],"evaluation.":[39],"The":[40,87],"results":[42],"two":[44],"different":[45],"automated":[46],"approaches":[47],"are":[50],"compared":[51],"to":[52,85,91],"manual":[53],"same":[57],"using":[59],"rigorous":[61],"evaluation":[62],"scheme.":[63],"revealed":[65],"that":[66],"combination":[67],"respective":[70],"types":[72],"with":[73],"most":[75],"suitable":[76],"microscopy":[77],"method":[78],"resulted":[79],"in":[80],"high":[81],"success":[82],"rates":[83],"up":[84],"97%.":[86],"described":[88],"approach":[89],"permits":[90],"automatically":[92],"perform":[93],"statistical":[95],"analysis":[96],"various":[98],"parameters":[99],"cells.":[102]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":2}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
