{"id":"https://openalex.org/W4386702974","doi":"https://doi.org/10.1109/tkde.2023.3314502","title":"GIaNt: Protein-Ligand Binding Affinity Prediction via Geometry-Aware Interactive Graph Neural Network","display_name":"GIaNt: Protein-Ligand Binding Affinity Prediction via Geometry-Aware Interactive Graph Neural Network","publication_year":2023,"publication_date":"2023-09-13","ids":{"openalex":"https://openalex.org/W4386702974","doi":"https://doi.org/10.1109/tkde.2023.3314502"},"language":"en","primary_location":{"id":"doi:10.1109/tkde.2023.3314502","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tkde.2023.3314502","pdf_url":null,"source":{"id":"https://openalex.org/S30698027","display_name":"IEEE Transactions on Knowledge and Data Engineering","issn_l":"1041-4347","issn":["1041-4347","1558-2191","2326-3865"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320439","host_organization_name":"IEEE Computer Society","host_organization_lineage":["https://openalex.org/P4310320439","https://openalex.org/P4310319808"],"host_organization_lineage_names":["IEEE Computer Society","Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Knowledge and Data Engineering","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101613121","display_name":"Shuangli Li","orcid":"https://orcid.org/0000-0001-9520-2462"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]},{"id":"https://openalex.org/I98301712","display_name":"Baidu (China)","ror":"https://ror.org/03vs3wt56","country_code":"CN","type":"company","lineage":["https://openalex.org/I98301712"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Shuangli Li","raw_affiliation_strings":["Anhui Province Key Lab of Big Data Analysis and Application, School of Computer Science and Technology, University of Science and Technology of China, Hefei, Anhui, China","Business Intelligence Lab, Baidu Research, Beijing, China"],"raw_orcid":"https://orcid.org/0000-0001-9520-2462","affiliations":[{"raw_affiliation_string":"Anhui Province Key Lab of Big Data Analysis and Application, School of Computer Science and Technology, University of Science and Technology of China, Hefei, Anhui, China","institution_ids":["https://openalex.org/I126520041"]},{"raw_affiliation_string":"Business Intelligence Lab, Baidu Research, Beijing, China","institution_ids":["https://openalex.org/I98301712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101481194","display_name":"Jingbo Zhou","orcid":"https://orcid.org/0000-0003-2677-7021"},"institutions":[{"id":"https://openalex.org/I98301712","display_name":"Baidu (China)","ror":"https://ror.org/03vs3wt56","country_code":"CN","type":"company","lineage":["https://openalex.org/I98301712"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingbo Zhou","raw_affiliation_strings":["Business Intelligence Lab, Baidu Research, Beijing, China"],"raw_orcid":"https://orcid.org/0000-0003-2677-7021","affiliations":[{"raw_affiliation_string":"Business Intelligence Lab, Baidu Research, Beijing, China","institution_ids":["https://openalex.org/I98301712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025292786","display_name":"Tong Xu","orcid":"https://orcid.org/0000-0003-4246-5386"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tong Xu","raw_affiliation_strings":["Anhui Province Key Lab of Big Data Analysis and Application, School of Computer Science, University of Science and Technology of China, Hefei, Anhui, China"],"raw_orcid":"https://orcid.org/0000-0003-4246-5386","affiliations":[{"raw_affiliation_string":"Anhui Province Key Lab of Big Data Analysis and Application, School of Computer Science, University of Science and Technology of China, Hefei, Anhui, China","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006404928","display_name":"Liang Huang","orcid":"https://orcid.org/0000-0001-6444-7045"},"institutions":[{"id":"https://openalex.org/I131249849","display_name":"Oregon State University","ror":"https://ror.org/00ysfqy60","country_code":"US","type":"education","lineage":["https://openalex.org/I131249849"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Liang Huang","raw_affiliation_strings":["Oregon State University, Corvallis, OR, USA"],"raw_orcid":"https://orcid.org/0000-0001-6444-7045","affiliations":[{"raw_affiliation_string":"Oregon State University, Corvallis, OR, USA","institution_ids":["https://openalex.org/I131249849"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100380524","display_name":"Fan Wang","orcid":"https://orcid.org/0000-0002-5373-4302"},"institutions":[{"id":"https://openalex.org/I98301712","display_name":"Baidu (China)","ror":"https://ror.org/03vs3wt56","country_code":"CN","type":"company","lineage":["https://openalex.org/I98301712"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fan Wang","raw_affiliation_strings":["Baidu Inc., Beijing, China"],"raw_orcid":"https://orcid.org/0000-0002-5373-4302","affiliations":[{"raw_affiliation_string":"Baidu Inc., Beijing, China","institution_ids":["https://openalex.org/I98301712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081254155","display_name":"Haoyi Xiong","orcid":"https://orcid.org/0000-0002-5451-3253"},"institutions":[{"id":"https://openalex.org/I200769079","display_name":"Hong Kong University of Science and Technology","ror":"https://ror.org/00q4vv597","country_code":"HK","type":"education","lineage":["https://openalex.org/I200769079"]},{"id":"https://openalex.org/I98301712","display_name":"Baidu (China)","ror":"https://ror.org/03vs3wt56","country_code":"CN","type":"company","lineage":["https://openalex.org/I98301712"]}],"countries":["CN","HK"],"is_corresponding":false,"raw_author_name":"Haoyi Xiong","raw_affiliation_strings":["Artificial Intelligence Thrust, Hong Kong University of Science and Technology (Guangzhou), Guangzhou, China","Baidu Inc., Beijing, China"],"raw_orcid":"https://orcid.org/0000-0002-5451-3253","affiliations":[{"raw_affiliation_string":"Artificial Intelligence Thrust, Hong Kong University of Science and Technology (Guangzhou), Guangzhou, China","institution_ids":["https://openalex.org/I200769079"]},{"raw_affiliation_string":"Baidu Inc., Beijing, China","institution_ids":["https://openalex.org/I98301712"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101877382","display_name":"Weili Huang","orcid":"https://orcid.org/0009-0003-8293-7891"},"institutions":[{"id":"https://openalex.org/I147554453","display_name":"University of Bedfordshire","ror":"https://ror.org/0400avk24","country_code":"GB","type":"education","lineage":["https://openalex.org/I147554453"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Weili Huang","raw_affiliation_strings":["HWL Consulting LLC, Bedfordshire, U.K"],"raw_orcid":"https://orcid.org/0009-0003-8293-7891","affiliations":[{"raw_affiliation_string":"HWL Consulting LLC, Bedfordshire, U.K","institution_ids":["https://openalex.org/I147554453"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021332177","display_name":"Dejing Dou","orcid":"https://orcid.org/0000-0003-2949-6874"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Dejing Dou","raw_affiliation_strings":["BCG X, Boston, MA, USA"],"raw_orcid":"https://orcid.org/0000-0003-2949-6874","affiliations":[{"raw_affiliation_string":"BCG X, Boston, MA, USA","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101862104","display_name":"Hui Xiong","orcid":"https://orcid.org/0000-0001-6016-6465"},"institutions":[{"id":"https://openalex.org/I200769079","display_name":"Hong Kong University of Science and Technology","ror":"https://ror.org/00q4vv597","country_code":"HK","type":"education","lineage":["https://openalex.org/I200769079"]},{"id":"https://openalex.org/I98301712","display_name":"Baidu (China)","ror":"https://ror.org/03vs3wt56","country_code":"CN","type":"company","lineage":["https://openalex.org/I98301712"]}],"countries":["CN","HK"],"is_corresponding":false,"raw_author_name":"Hui Xiong","raw_affiliation_strings":["Artificial Intelligence Thrust, Hong Kong University of Science and Technology (Guangzhou), Guangzhou, China","Baidu Inc., Beijing, China"],"raw_orcid":"https://orcid.org/0000-0001-6016-6465","affiliations":[{"raw_affiliation_string":"Artificial Intelligence Thrust, Hong Kong University of Science and Technology (Guangzhou), Guangzhou, China","institution_ids":["https://openalex.org/I200769079"]},{"raw_affiliation_string":"Baidu Inc., Beijing, China","institution_ids":["https://openalex.org/I98301712"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5101613121"],"corresponding_institution_ids":["https://openalex.org/I126520041","https://openalex.org/I98301712"],"apc_list":null,"apc_paid":null,"fwci":3.8795,"has_fulltext":false,"cited_by_count":20,"citation_normalized_percentile":{"value":0.94669411,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"36","issue":"5","first_page":"1991","last_page":"2008"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6435014605522156},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5228319764137268},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5200105309486389},{"id":"https://openalex.org/keywords/dihedral-angle","display_name":"Dihedral angle","score":0.48198431730270386},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.46459150314331055},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.44712620973587036},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3955461382865906},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3875911831855774},{"id":"https://openalex.org/keywords/topology","display_name":"Topology (electrical circuits)","score":0.3302435576915741},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.196316659450531},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.18751248717308044},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.13137921690940857}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6435014605522156},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5228319764137268},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5200105309486389},{"id":"https://openalex.org/C89025888","wikidata":"https://www.wikidata.org/wiki/Q911907","display_name":"Dihedral angle","level":4,"score":0.48198431730270386},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.46459150314331055},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.44712620973587036},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3955461382865906},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3875911831855774},{"id":"https://openalex.org/C184720557","wikidata":"https://www.wikidata.org/wiki/Q7825049","display_name":"Topology (electrical circuits)","level":2,"score":0.3302435576915741},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.196316659450531},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.18751248717308044},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.13137921690940857},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.0},{"id":"https://openalex.org/C112887158","wikidata":"https://www.wikidata.org/wiki/Q169324","display_name":"Hydrogen bond","level":3,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/tkde.2023.3314502","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tkde.2023.3314502","pdf_url":null,"source":{"id":"https://openalex.org/S30698027","display_name":"IEEE Transactions on Knowledge and Data Engineering","issn_l":"1041-4347","issn":["1041-4347","1558-2191","2326-3865"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320439","host_organization_name":"IEEE Computer Society","host_organization_lineage":["https://openalex.org/P4310320439","https://openalex.org/P4310319808"],"host_organization_lineage_names":["IEEE Computer Society","Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Knowledge and Data Engineering","raw_type":"journal-article"},{"id":"pmh:oai:repository.hkust.edu.hk:1783.1-130093","is_oa":false,"landing_page_url":"http://repository.hkust.edu.hk/ir/Record/1783.1-130093","pdf_url":null,"source":{"id":"https://openalex.org/S4306401796","display_name":"Rare & Special e-Zone (The Hong Kong University of Science and Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I200769079","host_organization_name":"Hong Kong University of Science and Technology","host_organization_lineage":["https://openalex.org/I200769079"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G425168253","display_name":null,"funder_award_id":"61960206008","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":72,"referenced_works":["https://openalex.org/W1527782499","https://openalex.org/W1974809008","https://openalex.org/W1986240377","https://openalex.org/W1993046136","https://openalex.org/W2003356525","https://openalex.org/W2012084558","https://openalex.org/W2042572511","https://openalex.org/W2068495101","https://openalex.org/W2076779488","https://openalex.org/W2092723276","https://openalex.org/W2100672820","https://openalex.org/W2128332459","https://openalex.org/W2134967712","https://openalex.org/W2135817448","https://openalex.org/W2140048706","https://openalex.org/W2148512505","https://openalex.org/W2152630148","https://openalex.org/W2152964937","https://openalex.org/W2214665483","https://openalex.org/W2583907533","https://openalex.org/W2584378849","https://openalex.org/W2781821160","https://openalex.org/W2785947426","https://openalex.org/W2792196009","https://openalex.org/W2902812092","https://openalex.org/W2923693308","https://openalex.org/W2948035163","https://openalex.org/W2948831670","https://openalex.org/W2949504121","https://openalex.org/W2963396480","https://openalex.org/W2964051675","https://openalex.org/W2965857891","https://openalex.org/W2966357564","https://openalex.org/W2969996838","https://openalex.org/W2974531988","https://openalex.org/W3007488165","https://openalex.org/W3034516664","https://openalex.org/W3036527662","https://openalex.org/W3041085747","https://openalex.org/W3042283064","https://openalex.org/W3080637781","https://openalex.org/W3096561213","https://openalex.org/W3098189759","https://openalex.org/W3098465726","https://openalex.org/W3099414221","https://openalex.org/W3103859462","https://openalex.org/W3109493217","https://openalex.org/W3109949289","https://openalex.org/W3112527819","https://openalex.org/W3122057397","https://openalex.org/W3127701890","https://openalex.org/W3128917876","https://openalex.org/W3160381762","https://openalex.org/W3161072801","https://openalex.org/W3167575787","https://openalex.org/W3177500196","https://openalex.org/W3177828909","https://openalex.org/W3178328486","https://openalex.org/W3204651332","https://openalex.org/W3207312583","https://openalex.org/W4206425576","https://openalex.org/W4206609219","https://openalex.org/W4230000480","https://openalex.org/W4286373989","https://openalex.org/W6688357764","https://openalex.org/W6726873649","https://openalex.org/W6754929296","https://openalex.org/W6774009640","https://openalex.org/W6787484091","https://openalex.org/W6790192711","https://openalex.org/W6811246986","https://openalex.org/W6841143912"],"related_works":["https://openalex.org/W2128884622","https://openalex.org/W2112380088","https://openalex.org/W1715467939","https://openalex.org/W4318816969","https://openalex.org/W2161756346","https://openalex.org/W1977613337","https://openalex.org/W2075921262","https://openalex.org/W2300182960","https://openalex.org/W2338444630","https://openalex.org/W1990619265"],"abstract_inverted_index":{"Drug":[0],"discovery":[1],"often":[2],"relies":[3],"on":[4,214],"the":[5,30,47,123,140,184,198,218],"successful":[6],"prediction":[7,27],"of":[8,32,94,130,220],"protein-ligand":[9,33,40],"binding":[10],"affinity.":[11],"Recent":[12],"advances":[13],"have":[14],"shown":[15],"great":[16],"promise":[17],"in":[18,73,134,155],"applying":[19],"graph":[20,44,84,99],"neural":[21,85],"networks":[22],"(GNNs)":[23],"for":[24,202],"better":[25],"affinity":[26],"by":[28],"learning":[29,100,110,205],"representations":[31],"complexes.":[34],"However,":[35],"existing":[36],"solutions":[37],"usually":[38],"treat":[39],"complexes":[41],"as":[42],"topological":[43],"data,":[45],"thus":[46],"3D":[48,97,141,156],"geometry-based":[49],"biomolecular":[50],"structural":[51],"information":[52,154],"is":[53,162,194],"not":[54],"fully":[55],"utilized.":[56],"The":[57],"essential":[58],"intermolecular":[59],"interactions":[60,66],"with":[61,177],"long-range":[62],"dependencies,":[63],"including":[64,146],"type-wise":[65],"and":[67,107,132,151,169],"molecule-wise":[68],"interactions,":[69],"are":[70,175],"also":[71],"neglected":[72],"GNN":[74],"models.":[75],"To":[76],"this":[77],"end,":[78],"we":[79],"propose":[80],"a":[81,135,178,189,207],"geometry-aware":[82],"interactive":[83,109,173,200],"network":[86,101,111],"(":[87,102,112],"<sc":[88,103,113,118,159,221],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[89,104,114,119,160,222],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">GIaNt</small>":[90,223],")":[91,106],"which":[92],"consists":[93],"two":[95,215],"components:":[96],"geometric":[98,142],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">3DG-Net</small>":[105,120],"pairwise":[108,190],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">Pi-Net</small>":[115,161],").":[116],"Specifically,":[117],"iteratively":[121],"performs":[122],"node-edge":[124],"interaction":[125],"process":[126],"to":[127,164,182,196],"update":[128],"embeddings":[129],"nodes":[131],"edges":[133,174],"unified":[136],"framework":[137],"while":[138],"preserving":[139],"factors":[143],"among":[144],"atoms,":[145],"spatial":[147],"distance,":[148],"polar":[149],"angle":[150,153],"dihedral":[152],"space.":[157],"Moreover,":[158],"adopted":[163],"incorporate":[165],"both":[166],"element":[167],"type-level":[168,186],"molecule-level":[170],"interactions.":[171,187],"Specially,":[172],"gathered":[176],"subsequent":[179],"reconstruction":[180],"loss":[181],"reflect":[183],"global":[185],"Meanwhile,":[188],"attentive":[191],"pooling":[192],"scheme":[193],"designed":[195],"identify":[197],"critical":[199],"atoms":[201],"complex":[203],"representation":[204],"from":[206],"semantic":[208],"view.":[209],"An":[210],"exhaustive":[211],"experimental":[212],"study":[213],"benchmarks":[216],"verifies":[217],"superiority":[219],".":[224]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
