{"id":"https://openalex.org/W3196558805","doi":"https://doi.org/10.1109/tkde.2021.3108819","title":"Kernelized Multitask Learning Method for Personalized Signaling Adverse Drug Reactions","display_name":"Kernelized Multitask Learning Method for Personalized Signaling Adverse Drug Reactions","publication_year":2021,"publication_date":"2021-01-01","ids":{"openalex":"https://openalex.org/W3196558805","doi":"https://doi.org/10.1109/tkde.2021.3108819","mag":"3196558805"},"language":"en","primary_location":{"id":"doi:10.1109/tkde.2021.3108819","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tkde.2021.3108819","pdf_url":null,"source":{"id":"https://openalex.org/S30698027","display_name":"IEEE Transactions on Knowledge and Data Engineering","issn_l":"1041-4347","issn":["1041-4347","1558-2191","2326-3865"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320439","host_organization_name":"IEEE Computer Society","host_organization_lineage":["https://openalex.org/P4310320439","https://openalex.org/P4310319808"],"host_organization_lineage_names":["IEEE Computer Society","Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Knowledge and Data Engineering","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100637346","display_name":"Fan Yang","orcid":"https://orcid.org/0000-0003-0717-5420"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fan Yang","raw_affiliation_strings":["School of Public Health, Shandong University, 12589 Jinan, Shandong, China, (e-mail: fanyang@sdu.edu.cn)","[School of Public Health, Shandong University, 12589 Jinan, Shandong, China, (e-mail: fanyang@sdu.edu.cn)]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health, Shandong University, 12589 Jinan, Shandong, China, (e-mail: fanyang@sdu.edu.cn)","institution_ids":["https://openalex.org/I154099455"]},{"raw_affiliation_string":"[School of Public Health, Shandong University, 12589 Jinan, Shandong, China, (e-mail: fanyang@sdu.edu.cn)]","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052596350","display_name":"Fuzhong Xue","orcid":"https://orcid.org/0000-0003-0378-7956"},"institutions":[{"id":"https://openalex.org/I154099455","display_name":"Shandong University","ror":"https://ror.org/0207yh398","country_code":"CN","type":"education","lineage":["https://openalex.org/I154099455"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fuzhong Xue","raw_affiliation_strings":["School of Public Health, Shandong University, 12589 Jinan, Shandong, China, (e-mail: xuefzh@sdu.edu.cn)","[School of Public Health, Shandong University, 12589 Jinan, Shandong, China, (e-mail: xuefzh@sdu.edu.cn)]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Public Health, Shandong University, 12589 Jinan, Shandong, China, (e-mail: xuefzh@sdu.edu.cn)","institution_ids":["https://openalex.org/I154099455"]},{"raw_affiliation_string":"[School of Public Health, Shandong University, 12589 Jinan, Shandong, China, (e-mail: xuefzh@sdu.edu.cn)]","institution_ids":["https://openalex.org/I154099455"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049750015","display_name":"Yanchun Zhang","orcid":"https://orcid.org/0000-0002-5094-5980"},"institutions":[{"id":"https://openalex.org/I71270174","display_name":"Victoria University","ror":"https://ror.org/04j757h98","country_code":"AU","type":"education","lineage":["https://openalex.org/I71270174"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Yanchun Zhang","raw_affiliation_strings":["School of Computer Science and Mathematics, Victoria University, Melbourne, Victoria, Australia, (e-mail: yanchun.zhang@vu.edu.au)","[School of Computer Science and Mathematics, Victoria University, Melbourne, Victoria, Australia, (e-mail: yanchun.zhang@vu.edu.au)]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Mathematics, Victoria University, Melbourne, Victoria, Australia, (e-mail: yanchun.zhang@vu.edu.au)","institution_ids":["https://openalex.org/I71270174"]},{"raw_affiliation_string":"[School of Computer Science and Mathematics, Victoria University, Melbourne, Victoria, Australia, (e-mail: yanchun.zhang@vu.edu.au)]","institution_ids":["https://openalex.org/I71270174"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082384108","display_name":"George Karypis","orcid":"https://orcid.org/0000-0003-2753-1437"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]},{"id":"https://openalex.org/I2800403580","display_name":"University of Minnesota System","ror":"https://ror.org/03grvy078","country_code":"US","type":"education","lineage":["https://openalex.org/I2800403580"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"George Karypis","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Minnesota, Twin Cities Campus, Minneapolis, Minnesota, United States, (e-mail: karypis@umn.edu)","[Department of Computer Science and Engineering, University of Minnesota, Twin Cities Campus, Minneapolis, Minnesota, United States, (e-mail: karypis@umn.edu)]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Minnesota, Twin Cities Campus, Minneapolis, Minnesota, United States, (e-mail: karypis@umn.edu)","institution_ids":["https://openalex.org/I130238516","https://openalex.org/I2800403580"]},{"raw_affiliation_string":"[Department of Computer Science and Engineering, University of Minnesota, Twin Cities Campus, Minneapolis, Minnesota, United States, (e-mail: karypis@umn.edu)]","institution_ids":["https://openalex.org/I130238516"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.7221,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.63824214,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11943","display_name":"Pharmacovigilance and Adverse Drug Reactions","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/3005","display_name":"Toxicology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11943","display_name":"Pharmacovigilance and Adverse Drug Reactions","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/3005","display_name":"Toxicology"},"field":{"id":"https://openalex.org/fields/30","display_name":"Pharmacology, Toxicology and Pharmaceutics"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12255","display_name":"Biosimilars and Bioanalytical Methods","score":0.9646999835968018,"subfield":{"id":"https://openalex.org/subfields/2403","display_name":"Immunology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/adverse-event-reporting-system","display_name":"Adverse Event Reporting System","score":0.8315614461898804},{"id":"https://openalex.org/keywords/pharmacovigilance","display_name":"Pharmacovigilance","score":0.8207542896270752},{"id":"https://openalex.org/keywords/adverse-effect","display_name":"Adverse effect","score":0.605320930480957},{"id":"https://openalex.org/keywords/drug-reaction","display_name":"Drug reaction","score":0.5826976895332336},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5194441676139832},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.47554489970207214},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.47182923555374146},{"id":"https://openalex.org/keywords/personalized-medicine","display_name":"Personalized medicine","score":0.45276960730552673},{"id":"https://openalex.org/keywords/adverse-drug-reaction","display_name":"Adverse drug reaction","score":0.4249926507472992},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4179183840751648},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.417687326669693},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.3793236017227173},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.34774237871170044},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07206591963768005}],"concepts":[{"id":"https://openalex.org/C2777105317","wikidata":"https://www.wikidata.org/wiki/Q4686710","display_name":"Adverse Event Reporting System","level":3,"score":0.8315614461898804},{"id":"https://openalex.org/C57658597","wikidata":"https://www.wikidata.org/wiki/Q1550789","display_name":"Pharmacovigilance","level":3,"score":0.8207542896270752},{"id":"https://openalex.org/C197934379","wikidata":"https://www.wikidata.org/wiki/Q2047938","display_name":"Adverse effect","level":2,"score":0.605320930480957},{"id":"https://openalex.org/C2993432071","wikidata":"https://www.wikidata.org/wiki/Q45959","display_name":"Drug reaction","level":3,"score":0.5826976895332336},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5194441676139832},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.47554489970207214},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.47182923555374146},{"id":"https://openalex.org/C32220436","wikidata":"https://www.wikidata.org/wiki/Q2072214","display_name":"Personalized medicine","level":2,"score":0.45276960730552673},{"id":"https://openalex.org/C2780542314","wikidata":"https://www.wikidata.org/wiki/Q45959","display_name":"Adverse drug reaction","level":3,"score":0.4249926507472992},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4179183840751648},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.417687326669693},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.3793236017227173},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.34774237871170044},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07206591963768005},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/tkde.2021.3108819","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tkde.2021.3108819","pdf_url":null,"source":{"id":"https://openalex.org/S30698027","display_name":"IEEE Transactions on Knowledge and Data Engineering","issn_l":"1041-4347","issn":["1041-4347","1558-2191","2326-3865"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320439","host_organization_name":"IEEE Computer Society","host_organization_lineage":["https://openalex.org/P4310320439","https://openalex.org/P4310319808"],"host_organization_lineage_names":["IEEE Computer Society","Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Knowledge and Data Engineering","raw_type":"journal-article"},{"id":"pmh:oai:eprints.vu.edu.au:47114","is_oa":false,"landing_page_url":"https://vuir.vu.edu.au/47114/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400215","display_name":"Victoria University Research Repository (Victoria University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I41156924","host_organization_name":"Victoria University of Wellington","host_organization_lineage":["https://openalex.org/I41156924"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5517333426","display_name":null,"funder_award_id":"2019M662373","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320321543","display_name":"China Postdoctoral Science Foundation","ror":"https://ror.org/0426zh255"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":46,"referenced_works":["https://openalex.org/W265320276","https://openalex.org/W1507626491","https://openalex.org/W1524926404","https://openalex.org/W1547142901","https://openalex.org/W1881168306","https://openalex.org/W1892813713","https://openalex.org/W1955857676","https://openalex.org/W1967464880","https://openalex.org/W1969879564","https://openalex.org/W1981809734","https://openalex.org/W1988100739","https://openalex.org/W1989631426","https://openalex.org/W2006459281","https://openalex.org/W2012384228","https://openalex.org/W2015487160","https://openalex.org/W2034618876","https://openalex.org/W2035977761","https://openalex.org/W2040135138","https://openalex.org/W2040786813","https://openalex.org/W2049946556","https://openalex.org/W2073834783","https://openalex.org/W2074192927","https://openalex.org/W2074231493","https://openalex.org/W2080894787","https://openalex.org/W2086049425","https://openalex.org/W2087064593","https://openalex.org/W2096944620","https://openalex.org/W2099111195","https://openalex.org/W2109743529","https://openalex.org/W2118415328","https://openalex.org/W2123089829","https://openalex.org/W2123402141","https://openalex.org/W2136127280","https://openalex.org/W2145394798","https://openalex.org/W2147598330","https://openalex.org/W2153972688","https://openalex.org/W2156023253","https://openalex.org/W2544883878","https://openalex.org/W2614252098","https://openalex.org/W2900032756","https://openalex.org/W2907654894","https://openalex.org/W3034268901","https://openalex.org/W4230604660","https://openalex.org/W4255788608","https://openalex.org/W6674727221","https://openalex.org/W6680830989"],"related_works":["https://openalex.org/W2995438986","https://openalex.org/W2377282230","https://openalex.org/W2403681070","https://openalex.org/W1606297102","https://openalex.org/W2520672216","https://openalex.org/W2026160434","https://openalex.org/W2521950182","https://openalex.org/W2043382072","https://openalex.org/W4311473783","https://openalex.org/W2765846794"],"abstract_inverted_index":{"The":[0,107,150],"signaling":[1,35,101],"of":[2,72,82,92,156],"the":[3,40,69,90,118,154,172],"associations":[4],"between":[5],"drugs":[6,44],"and":[7,66,103,145,159],"adverse":[8,112,129],"drug":[9,113,130],"reactions":[10],"(ADRs)":[11],"is":[12,22,64,109],"a":[13,55],"challenging":[14],"task":[15],"in":[16,61],"pharmacovigilance,":[17],"especially":[18],"when":[19],"an":[20],"association":[21],"infrequent":[23,176],"or":[24],"has":[25,171],"never":[26],"previously":[27],"been":[28],"reported.":[29],"Most":[30],"existing":[31,184],"methods":[32],"for":[33,84],"ADR":[34,100],"are":[36],"based":[37],"on":[38,111],"analyzing":[39],"frequency":[41],"with":[42,48],"which":[43,62,125],"tend":[45],"to":[46,78,174],"co-occur":[47],"ADRs.":[49],"In":[50],"this":[51],"article,":[52],"we":[53],"propose":[54],"kernelized":[56],"multitask":[57],"learning":[58],"model,":[59],"KEMULA,":[60],"information":[63,77],"learned":[65],"transferred":[67],"from":[68,117],"clinical":[70],"data":[71],"other":[73],"patients":[74],"as":[75],"collaborative":[76],"rank":[79],"distinct":[80],"lists":[81],"ADRs":[83,168,177],"different":[85],"patients.":[86],"We":[87],"comprehensively":[88],"compare":[89],"performance":[91],"KEMULA":[93,105],"against":[94],"three":[95],"baseline":[96],"methods,":[97,102],"two":[98,104],"state-of-the-art":[99],"variants.":[106],"method":[108,158],"tested":[110],"event":[114,131],"reports":[115],"retrieved":[116],"FDA":[119],"Adverse":[120],"Event":[121],"Reporting":[122],"System":[123],"(FAERS),":[124],"includes":[126],"4,106,633":[127],"unique":[128,134,137,141,147],"reports,":[132],"7,824":[133],"ADRs,":[135],"114":[136],"biotech":[138],"drugs,":[139,144],"1,151":[140],"small":[142],"molecule":[143],"3,363":[146],"medical":[148],"conditions.":[149],"experimental":[151],"results":[152],"demonstrate":[153],"advantages":[155],"our":[157],"show":[160],"that":[161,178],"it":[162],"not":[163],"only":[164],"can":[165],"signal":[166,175],"frequent":[167],"but":[169],"also":[170],"power":[173],"cannot":[179],"be":[180],"signaled":[181],"by":[182],"most":[183],"methods.":[185]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
