{"id":"https://openalex.org/W3041516361","doi":"https://doi.org/10.1109/tit.2022.3156276","title":"Mechanisms for Hiding Sensitive Genotypes With Information-Theoretic Privacy","display_name":"Mechanisms for Hiding Sensitive Genotypes With Information-Theoretic Privacy","publication_year":2022,"publication_date":"2022-03-03","ids":{"openalex":"https://openalex.org/W3041516361","doi":"https://doi.org/10.1109/tit.2022.3156276","mag":"3041516361","pmid":"https://pubmed.ncbi.nlm.nih.gov/37283781"},"language":"en","primary_location":{"id":"doi:10.1109/tit.2022.3156276","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tit.2022.3156276","pdf_url":null,"source":{"id":"https://openalex.org/S4502562","display_name":"IEEE Transactions on Information Theory","issn_l":"0018-9448","issn":["0018-9448","1557-9654"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Information Theory","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10243750/pdf/nihms-1850165.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103183422","display_name":"Fangwei Ye","orcid":"https://orcid.org/0000-0003-4675-2622"},"institutions":[{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]},{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Fangwei Ye","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, USA","Broad Institute of MIT and Harvard, Cambridge, MA, USA"],"raw_orcid":"https://orcid.org/0000-0003-4675-2622","affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, USA","institution_ids":["https://openalex.org/I102322142"]},{"raw_affiliation_string":"Broad Institute of MIT and Harvard, Cambridge, MA, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026909168","display_name":"Hyunghoon Cho","orcid":"https://orcid.org/0000-0002-2713-0150"},"institutions":[{"id":"https://openalex.org/I107606265","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I107606265"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hyunghoon Cho","raw_affiliation_strings":["Broad Institute of MIT and Harvard, Cambridge, MA, USA"],"raw_orcid":"https://orcid.org/0000-0002-2713-0150","affiliations":[{"raw_affiliation_string":"Broad Institute of MIT and Harvard, Cambridge, MA, USA","institution_ids":["https://openalex.org/I107606265"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110217226","display_name":"Salim El Rouayheb","orcid":"https://orcid.org/0009-0005-4515-2213"},"institutions":[{"id":"https://openalex.org/I102322142","display_name":"Rutgers, The State University of New Jersey","ror":"https://ror.org/05vt9qd57","country_code":"US","type":"education","lineage":["https://openalex.org/I102322142"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Salim El Rouayheb","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Rutgers, The State University of New Jersey, Piscataway, NJ, USA","institution_ids":["https://openalex.org/I102322142"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5103183422"],"corresponding_institution_ids":["https://openalex.org/I102322142","https://openalex.org/I107606265"],"apc_list":null,"apc_paid":null,"fwci":0.8324,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.76515331,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"68","issue":"6","first_page":"4090","last_page":"4105"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10764","display_name":"Privacy-Preserving Technologies in Data","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10764","display_name":"Privacy-Preserving Technologies in Data","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10964","display_name":"Wireless Communication Security Techniques","score":0.9818999767303467,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11045","display_name":"Privacy, Security, and Data Protection","score":0.9746000170707703,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6270898580551147},{"id":"https://openalex.org/keywords/bounding-overwatch","display_name":"Bounding overwatch","score":0.6018339991569519},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5344952940940857},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.5029541850090027},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4569573402404785},{"id":"https://openalex.org/keywords/upper-and-lower-bounds","display_name":"Upper and lower bounds","score":0.44328221678733826},{"id":"https://openalex.org/keywords/erasure","display_name":"Erasure","score":0.4333036541938782},{"id":"https://openalex.org/keywords/information-theory","display_name":"Information theory","score":0.43178820610046387},{"id":"https://openalex.org/keywords/markov-chain","display_name":"Markov chain","score":0.4261021316051483},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3755809962749481},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.26880234479904175},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.17462530732154846},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.1410146951675415},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11659112572669983},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.09750357270240784}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6270898580551147},{"id":"https://openalex.org/C63584917","wikidata":"https://www.wikidata.org/wiki/Q333286","display_name":"Bounding overwatch","level":2,"score":0.6018339991569519},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5344952940940857},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.5029541850090027},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4569573402404785},{"id":"https://openalex.org/C77553402","wikidata":"https://www.wikidata.org/wiki/Q13222579","display_name":"Upper and lower bounds","level":2,"score":0.44328221678733826},{"id":"https://openalex.org/C2778790127","wikidata":"https://www.wikidata.org/wiki/Q484885","display_name":"Erasure","level":2,"score":0.4333036541938782},{"id":"https://openalex.org/C52622258","wikidata":"https://www.wikidata.org/wiki/Q131222","display_name":"Information theory","level":2,"score":0.43178820610046387},{"id":"https://openalex.org/C98763669","wikidata":"https://www.wikidata.org/wiki/Q176645","display_name":"Markov chain","level":2,"score":0.4261021316051483},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3755809962749481},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.26880234479904175},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.17462530732154846},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.1410146951675415},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11659112572669983},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.09750357270240784},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/tit.2022.3156276","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tit.2022.3156276","pdf_url":null,"source":{"id":"https://openalex.org/S4502562","display_name":"IEEE Transactions on Information Theory","issn_l":"0018-9448","issn":["0018-9448","1557-9654"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Information Theory","raw_type":"journal-article"},{"id":"pmid:37283781","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37283781","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on information theory","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10243750","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10243750","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10243750/pdf/nihms-1850165.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Inf Theory","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:10243750","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10243750","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10243750/pdf/nihms-1850165.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Inf Theory","raw_type":"Text"},"sustainable_development_goals":[{"display_name":"Peace, Justice and strong institutions","id":"https://metadata.un.org/sdg/16","score":0.41999998688697815}],"awards":[{"id":"https://openalex.org/G3854211458","display_name":null,"funder_award_id":"CCF 1817635","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G564946284","display_name":null,"funder_award_id":"DP5 OD029574-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6174182005","display_name":null,"funder_award_id":"DP5 OD029574","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G695614583","display_name":"CAREER:Information Theoretic Methods for Private Information Retrieval and Search in Distributed Storage Systems","funder_award_id":"1817635","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320314070","display_name":"Broad Institute","ror":"https://ror.org/05a0ya142"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W3041516361.pdf"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W1962960380","https://openalex.org/W1992735538","https://openalex.org/W2009441527","https://openalex.org/W2082704080","https://openalex.org/W2086746796","https://openalex.org/W2088310213","https://openalex.org/W2099111195","https://openalex.org/W2108375133","https://openalex.org/W2109426455","https://openalex.org/W2125838338","https://openalex.org/W2147435839","https://openalex.org/W2169537477","https://openalex.org/W2260085643","https://openalex.org/W2336019055","https://openalex.org/W2339455727","https://openalex.org/W2460297212","https://openalex.org/W2510973425","https://openalex.org/W2511515754","https://openalex.org/W2515489235","https://openalex.org/W2529241974","https://openalex.org/W2537752244","https://openalex.org/W2598573398","https://openalex.org/W2599749253","https://openalex.org/W2762760742","https://openalex.org/W2766802942","https://openalex.org/W2800679800","https://openalex.org/W2908956768","https://openalex.org/W2911978475","https://openalex.org/W2913820485","https://openalex.org/W2954676804","https://openalex.org/W2960361450","https://openalex.org/W2962692592","https://openalex.org/W2963413537","https://openalex.org/W2973410938","https://openalex.org/W2975317292","https://openalex.org/W2975780631","https://openalex.org/W2976207836","https://openalex.org/W2982008584","https://openalex.org/W3023564491","https://openalex.org/W3101813394","https://openalex.org/W3102229796","https://openalex.org/W3105025471","https://openalex.org/W3105958450","https://openalex.org/W3119801758","https://openalex.org/W3145128584","https://openalex.org/W3210625802","https://openalex.org/W4246219036","https://openalex.org/W6681909838","https://openalex.org/W6768209446"],"related_works":["https://openalex.org/W2132137594","https://openalex.org/W2069783012","https://openalex.org/W2085967955","https://openalex.org/W1543605838","https://openalex.org/W4256335355","https://openalex.org/W3098612666","https://openalex.org/W1499116563","https://openalex.org/W2138867060","https://openalex.org/W2023859141","https://openalex.org/W2182290077"],"abstract_inverted_index":{"Motivated":[0],"by":[1,113,176],"the":[2,33,52,60,67,81,88,114,138,171,174,178],"growing":[3],"availability":[4],"of":[5,49,87,106,116,159,173,194],"personal":[6],"genomics":[7],"services,":[8],"we":[9,153,169],"study":[10],"an":[11,72,125,134,155],"information-theoretic":[12,78],"privacy":[13,74,179,195],"problem":[14],"that":[15,123],"arises":[16],"when":[17],"sharing":[18],"genomic":[19,197],"data:":[20],"a":[21,97,102,147,188],"user":[22],"wants":[23],"to":[24],"share":[25],"his":[26],"or":[27],"her":[28],"genome":[29],"sequence":[30,83,107,166],"while":[31],"keeping":[32],"genotypes":[34,54],"at":[35],"certain":[36],"positions":[37,64,117],"hidden,":[38],"which":[39],"could":[40],"otherwise":[41],"reveal":[42],"critical":[43],"health-related":[44],"information.":[45],"A":[46],"straightforward":[47],"solution":[48],"erasing":[50],"(masking)":[51],"chosen":[53],"does":[55],"not":[56],"ensure":[57],"privacy,":[58,79],"because":[59],"correlation":[61],"between":[62],"nearby":[63],"can":[65,93],"leak":[66],"masked":[68],"genotypes.":[69,90],"We":[70,121],"introduce":[71],"erasure-based":[73],"mechanism":[75,92,161,175],"with":[76,162],"perfect":[77],"whereby":[80],"released":[82,118],"is":[84,111,128,187],"statistically":[85],"independent":[86],"sensitive":[89],"Our":[91,185],"be":[94],"interpreted":[95],"as":[96],"locally-optimal":[98],"greedy":[99],"algorithm":[100],"for":[101],"given":[103],"processing":[104],"order":[105,127],"positions,":[108],"where":[109],"utility":[110],"measured":[112],"number":[115],"without":[119],"erasure.":[120],"show":[122],"finding":[124],"optimal":[126,139],"NP-hard":[129],"in":[130,151,165,196],"general":[131],"and":[132],"provide":[133],"upper":[135],"bound":[136],"on":[137],"utility.":[140],"For":[141],"sequences":[142],"from":[143,181],"hidden":[144],"Markov":[145],"models,":[146],"standard":[148],"modeling":[149],"approach":[150],"genetics,":[152],"propose":[154],"efficient":[156],"algorithmic":[157],"implementation":[158],"our":[160],"complexity":[163],"polynomial":[164],"length.":[167],"Moreover,":[168],"illustrate":[170],"robustness":[172],"bounding":[177],"leakage":[180],"erroneous":[182],"prior":[183],"distributions.":[184],"work":[186],"step":[189],"towards":[190],"more":[191],"rigorous":[192],"control":[193],"data":[198],"sharing.":[199]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
