{"id":"https://openalex.org/W3210767789","doi":"https://doi.org/10.1109/tit.2021.3122798","title":"Coding for Sequence Reconstruction for Single Edits","display_name":"Coding for Sequence Reconstruction for Single Edits","publication_year":2021,"publication_date":"2021-10-26","ids":{"openalex":"https://openalex.org/W3210767789","doi":"https://doi.org/10.1109/tit.2021.3122798","mag":"3210767789"},"language":"en","primary_location":{"id":"doi:10.1109/tit.2021.3122798","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tit.2021.3122798","pdf_url":null,"source":{"id":"https://openalex.org/S4502562","display_name":"IEEE Transactions on Information Theory","issn_l":"0018-9448","issn":["0018-9448","1557-9654"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Information Theory","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5042415594","display_name":"Kui Cai","orcid":"https://orcid.org/0000-0003-2059-0071"},"institutions":[{"id":"https://openalex.org/I152815399","display_name":"Singapore University of Technology and Design","ror":"https://ror.org/05j6fvn87","country_code":"SG","type":"education","lineage":["https://openalex.org/I152815399"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Kui Cai","raw_affiliation_strings":["Singapore University of Technology and Design, Singapore"],"affiliations":[{"raw_affiliation_string":"Singapore University of Technology and Design, Singapore","institution_ids":["https://openalex.org/I152815399"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083157397","display_name":"Han Mao Kiah","orcid":"https://orcid.org/0000-0001-5611-0848"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Han Mao Kiah","raw_affiliation_strings":["School of Physical and Mathematical Sciences, Nanyang Technological University, Singapore"],"affiliations":[{"raw_affiliation_string":"School of Physical and Mathematical Sciences, Nanyang Technological University, Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081533260","display_name":"Tuan Thanh Nguyen","orcid":"https://orcid.org/0000-0002-3179-9471"},"institutions":[{"id":"https://openalex.org/I152815399","display_name":"Singapore University of Technology and Design","ror":"https://ror.org/05j6fvn87","country_code":"SG","type":"education","lineage":["https://openalex.org/I152815399"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Tuan Thanh Nguyen","raw_affiliation_strings":["Singapore University of Technology and Design, Singapore"],"affiliations":[{"raw_affiliation_string":"Singapore University of Technology and Design, Singapore","institution_ids":["https://openalex.org/I152815399"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021586372","display_name":"Eitan Yaakobi","orcid":"https://orcid.org/0000-0002-9851-5234"},"institutions":[{"id":"https://openalex.org/I174306211","display_name":"Technion \u2013 Israel Institute of Technology","ror":"https://ror.org/03qryx823","country_code":"IL","type":"education","lineage":["https://openalex.org/I174306211"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Eitan Yaakobi","raw_affiliation_strings":["Department of Computer Science, Technion\u2014Israel Institute of Technology, Haifa, Israel"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Technion\u2014Israel Institute of Technology, Haifa, Israel","institution_ids":["https://openalex.org/I174306211"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5042415594"],"corresponding_institution_ids":["https://openalex.org/I152815399"],"apc_list":null,"apc_paid":null,"fwci":1.7894,"has_fulltext":false,"cited_by_count":32,"citation_normalized_percentile":{"value":0.85828146,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"68","issue":"1","first_page":"66","last_page":"79"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11181","display_name":"Advanced Data Storage Technologies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12162","display_name":"Cellular Automata and Applications","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/code-word","display_name":"Code word","score":0.7465235590934753},{"id":"https://openalex.org/keywords/codebook","display_name":"Codebook","score":0.6501345634460449},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5206412672996521},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5189568400382996},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.5083779692649841},{"id":"https://openalex.org/keywords/notation","display_name":"Notation","score":0.5030998587608337},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4253644347190857},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.397651731967926},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.3889368772506714},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3590092062950134},{"id":"https://openalex.org/keywords/decoding-methods","display_name":"Decoding methods","score":0.22100898623466492},{"id":"https://openalex.org/keywords/arithmetic","display_name":"Arithmetic","score":0.15975865721702576},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.09328597784042358}],"concepts":[{"id":"https://openalex.org/C153207627","wikidata":"https://www.wikidata.org/wiki/Q863873","display_name":"Code word","level":3,"score":0.7465235590934753},{"id":"https://openalex.org/C127759330","wikidata":"https://www.wikidata.org/wiki/Q637416","display_name":"Codebook","level":2,"score":0.6501345634460449},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5206412672996521},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5189568400382996},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.5083779692649841},{"id":"https://openalex.org/C45357846","wikidata":"https://www.wikidata.org/wiki/Q2001982","display_name":"Notation","level":2,"score":0.5030998587608337},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4253644347190857},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.397651731967926},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.3889368772506714},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3590092062950134},{"id":"https://openalex.org/C57273362","wikidata":"https://www.wikidata.org/wiki/Q576722","display_name":"Decoding methods","level":2,"score":0.22100898623466492},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.15975865721702576},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.09328597784042358},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/tit.2021.3122798","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tit.2021.3122798","pdf_url":null,"source":{"id":"https://openalex.org/S4502562","display_name":"IEEE Transactions on Information Theory","issn_l":"0018-9448","issn":["0018-9448","1557-9654"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Information Theory","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G667155577","display_name":null,"funder_award_id":"MOE2019-T2-2-123","funder_id":"https://openalex.org/F4320320751","funder_display_name":"Ministry of Education - Singapore"}],"funders":[{"id":"https://openalex.org/F4320320751","display_name":"Ministry of Education - Singapore","ror":"https://ror.org/01kcva023"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":33,"referenced_works":["https://openalex.org/W1606480398","https://openalex.org/W1647671624","https://openalex.org/W1980073965","https://openalex.org/W1981443800","https://openalex.org/W1991592043","https://openalex.org/W2025383314","https://openalex.org/W2086720637","https://openalex.org/W2162980030","https://openalex.org/W2170484108","https://openalex.org/W2261086168","https://openalex.org/W2592122940","https://openalex.org/W2742656286","https://openalex.org/W2788257106","https://openalex.org/W2793140590","https://openalex.org/W2793548940","https://openalex.org/W2899464095","https://openalex.org/W2921902583","https://openalex.org/W2936307398","https://openalex.org/W2951269465","https://openalex.org/W2963183421","https://openalex.org/W2963561675","https://openalex.org/W2963712885","https://openalex.org/W2964340211","https://openalex.org/W2976050422","https://openalex.org/W2999773690","https://openalex.org/W3005617074","https://openalex.org/W3010932251","https://openalex.org/W3048629723","https://openalex.org/W3081460576","https://openalex.org/W3118614175","https://openalex.org/W6636915900","https://openalex.org/W6772905702","https://openalex.org/W6775647111"],"related_works":["https://openalex.org/W2369939250","https://openalex.org/W2044909681","https://openalex.org/W2061475625","https://openalex.org/W2531507359","https://openalex.org/W4226086965","https://openalex.org/W2139713618","https://openalex.org/W2050457724","https://openalex.org/W2115542497","https://openalex.org/W2252720939","https://openalex.org/W2362722248"],"abstract_inverted_index":{"The":[0,32],"sequence":[1],"reconstruction":[2,132,223,238],"problem,":[3],"introduced":[4],"by":[5,64],"Levenshtein":[6],"in":[7,235],"2001,":[8],"considers":[9],"a":[10,17,70,98,116,121,151,216],"communication":[11],"scenario":[12],"where":[13,75,205],"the":[14,23,30,36,40,44,49,60,73,76,148,158,164,213],"sender":[15],"transmits":[16],"codeword":[18,99],"from":[19,100,174],"some":[20],"codebook":[21,37],"and":[22,43,127,130,195],"receiver":[24],"obtains":[25],"multiple":[26],"noisy":[27,79,108,161],"reads":[28,54,80,162],"of":[29,52,72,78,137,150,160,166,215],"codeword.":[31,62,217],"common":[33],"setup":[34],"assumes":[35],"to":[38,47,58,183,197],"be":[39,171],"entire":[41],"space":[42],"problem":[45,74],"is":[46,56,87],"determine":[48],"minimum":[50],"number":[51,77,159,165],"distinct":[53,107],"that":[55,96,114,156,221,234],"required":[57,169],"reconstruct":[59,97],"transmitted":[61],"Motivated":[63],"modern":[65],"storage":[66],"devices,":[67],"we":[68,90,154,232],"study":[69],"variant":[71],"<inline-formula":[81,101,138,175,184,198,206],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[82,93,102,139,176,185,199,207],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">":[83,103,140,177,186,200,208],"<tex-math":[84,104,141,178,187,201,209],"notation=\"LaTeX\">$N$":[85,105,142],"</tex-math></inline-formula>":[86,106,143,182,193,203,211],"fixed.":[88],"Specifically,":[89],"design":[91,131],"<italic":[92],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">reconstruction":[94],"codes</i>":[95],"reads.":[109],"We":[110,218],"focus":[111],"on":[112],"channels":[113],"introduce":[115],"single":[117,122,152],"edit":[118],"error":[119],"(i.e.":[120],"substitution,":[123],"insertion,":[124],"or":[125],"deletion)":[126],"their":[128],"variants,":[129],"codes":[133,224,239,247],"for":[134,147],"all":[135],"values":[136],".":[144],"In":[145],"particular,":[146],"case":[149],"edit,":[153],"show":[155,220],"as":[157,244],"increases,":[163],"redundant":[167,250],"symbols":[168],"can":[170,240],"gracefully":[172],"reduced":[173],"notation=\"LaTeX\">$\\log":[179,188],"_{q}":[180,189,191],"n+O(1)$":[181,192],"\\log":[190],",":[194,204],"then":[196],"notation=\"LaTeX\">$O(1)$":[202],"notation=\"LaTeX\">$n$":[210],"denotes":[212],"length":[214],"also":[219],"these":[222],"are":[225],"asymptotically":[226],"optimal.":[227],"Finally,":[228],"via":[229],"computer":[230],"simulations,":[231],"demonstrate":[233],"certain":[236],"cases,":[237],"achieve":[241],"similar":[242],"performance":[243],"classical":[245],"error-correcting":[246],"with":[248],"less":[249],"symbols.":[251]},"counts_by_year":[{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":8}],"updated_date":"2026-04-02T15:55:50.835912","created_date":"2025-10-10T00:00:00"}