{"id":"https://openalex.org/W3092943735","doi":"https://doi.org/10.1109/tit.2020.3030569","title":"Trace Reconstruction Problems in Computational Biology","display_name":"Trace Reconstruction Problems in Computational Biology","publication_year":2020,"publication_date":"2020-10-13","ids":{"openalex":"https://openalex.org/W3092943735","doi":"https://doi.org/10.1109/tit.2020.3030569","mag":"3092943735","pmid":"https://pubmed.ncbi.nlm.nih.gov/34176957"},"language":"en","primary_location":{"id":"doi:10.1109/tit.2020.3030569","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tit.2020.3030569","pdf_url":null,"source":{"id":"https://openalex.org/S4502562","display_name":"IEEE Transactions on Information Theory","issn_l":"0018-9448","issn":["0018-9448","1557-9654"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Information Theory","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2010.06083","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5024290991","display_name":"Vinnu Bhardwaj","orcid":"https://orcid.org/0000-0002-6913-2533"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vinnu Bhardwaj","raw_affiliation_strings":["Electrical and Computer Engineering Department, University of California San Diego, La Jolla, USA"],"raw_orcid":"https://orcid.org/0000-0002-6913-2533","affiliations":[{"raw_affiliation_string":"Electrical and Computer Engineering Department, University of California San Diego, La Jolla, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027480961","display_name":"Pavel A. Pevzner","orcid":"https://orcid.org/0000-0002-0418-165X"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Pavel A. Pevzner","raw_affiliation_strings":["Computer Science and Engineering Department, University of California San Diego, La Jolla, USA","University of California\u2014San Diego"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science and Engineering Department, University of California San Diego, La Jolla, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"University of California\u2014San Diego","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066091408","display_name":"Cyrus Rashtchian","orcid":"https://orcid.org/0000-0001-9422-2779"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I4210087596","display_name":"Qualcomm (United States)","ror":"https://ror.org/002zrf773","country_code":"US","type":"company","lineage":["https://openalex.org/I4210087596"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cyrus Rashtchian","raw_affiliation_strings":["Computer Science and Engineering Department, University of California San Diego, La Jolla, USA","Qualcomm Institute, University of California San Diego, La Jolla, USA"],"raw_orcid":"https://orcid.org/0000-0001-9422-2779","affiliations":[{"raw_affiliation_string":"Computer Science and Engineering Department, University of California San Diego, La Jolla, USA","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Qualcomm Institute, University of California San Diego, La Jolla, USA","institution_ids":["https://openalex.org/I36258959","https://openalex.org/I4210087596"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005373810","display_name":"Yana Safonova","orcid":"https://orcid.org/0000-0002-9634-4216"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yana Safonova","raw_affiliation_strings":["Computer Science and Engineering Department, University of California San Diego, La Jolla, USA"],"raw_orcid":"https://orcid.org/0000-0002-9634-4216","affiliations":[{"raw_affiliation_string":"Computer Science and Engineering Department, University of California San Diego, La Jolla, USA","institution_ids":["https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.07816361,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"67","issue":"6","first_page":"3295","last_page":"3314"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":0.9908999800682068,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9833999872207642,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/trace","display_name":"TRACE (psycholinguistics)","score":0.8565737009048462},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6437276601791382},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.639075756072998},{"id":"https://openalex.org/keywords/encode","display_name":"ENCODE","score":0.6130248308181763},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.4814562201499939},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.41090840101242065},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40495043992996216},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.347728967666626},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3291625678539276},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.27393633127212524},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14607828855514526},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14542201161384583},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13914155960083008},{"id":"https://openalex.org/keywords/paleontology","display_name":"Paleontology","score":0.08047083020210266}],"concepts":[{"id":"https://openalex.org/C75291252","wikidata":"https://www.wikidata.org/wiki/Q1315756","display_name":"TRACE (psycholinguistics)","level":2,"score":0.8565737009048462},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6437276601791382},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.639075756072998},{"id":"https://openalex.org/C66746571","wikidata":"https://www.wikidata.org/wiki/Q1134833","display_name":"ENCODE","level":3,"score":0.6130248308181763},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.4814562201499939},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.41090840101242065},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40495043992996216},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.347728967666626},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3291625678539276},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.27393633127212524},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14607828855514526},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14542201161384583},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13914155960083008},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.08047083020210266},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C37914503","wikidata":"https://www.wikidata.org/wiki/Q156495","display_name":"Mathematical physics","level":1,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1109/tit.2020.3030569","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tit.2020.3030569","pdf_url":null,"source":{"id":"https://openalex.org/S4502562","display_name":"IEEE Transactions on Information Theory","issn_l":"0018-9448","issn":["0018-9448","1557-9654"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Information Theory","raw_type":"journal-article"},{"id":"pmid:34176957","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34176957","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on information theory","raw_type":null},{"id":"pmh:oai:arXiv.org:2010.06083","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2010.06083","pdf_url":"https://arxiv.org/pdf/2010.06083","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:8224466","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8224466","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Trans Inf Theory","raw_type":"Text"},{"id":"doi:10.48550/arxiv.2010.06083","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2010.06083","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"},{"id":"mag:3092943735","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2010.06083","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2010.06083","pdf_url":"https://arxiv.org/pdf/2010.06083","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.44999998807907104,"id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G6853156662","display_name":null,"funder_award_id":"P41GM103484","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G7013037140","display_name":null,"funder_award_id":"2019-2020","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7210114151","display_name":"EAGER: Assembling the Immunoglobulin Loci Across Mammalian Species and Across the Human Population","funder_award_id":"2032783","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320307136","display_name":"American Association of Immunologists","ror":"https://ror.org/04q9fhm49"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332603","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":147,"referenced_works":["https://openalex.org/W937578315","https://openalex.org/W938539187","https://openalex.org/W1133414672","https://openalex.org/W1519266993","https://openalex.org/W1527197079","https://openalex.org/W1607133945","https://openalex.org/W1802312377","https://openalex.org/W1969151232","https://openalex.org/W1990061958","https://openalex.org/W1991897103","https://openalex.org/W2001496424","https://openalex.org/W2002638840","https://openalex.org/W2005245976","https://openalex.org/W2010295342","https://openalex.org/W2018339091","https://openalex.org/W2025177415","https://openalex.org/W2025383314","https://openalex.org/W2050952768","https://openalex.org/W2055519354","https://openalex.org/W2059420131","https://openalex.org/W2059499591","https://openalex.org/W2060586081","https://openalex.org/W2063573129","https://openalex.org/W2065057602","https://openalex.org/W2068871408","https://openalex.org/W2069021688","https://openalex.org/W2092672051","https://openalex.org/W2093752481","https://openalex.org/W2095554889","https://openalex.org/W2095914211","https://openalex.org/W2108187446","https://openalex.org/W2109868128","https://openalex.org/W2111211467","https://openalex.org/W2125870772","https://openalex.org/W2140323624","https://openalex.org/W2148836246","https://openalex.org/W2162980030","https://openalex.org/W2170484108","https://openalex.org/W2317651087","https://openalex.org/W2333320475","https://openalex.org/W2337033889","https://openalex.org/W2547929624","https://openalex.org/W2564763601","https://openalex.org/W2565989705","https://openalex.org/W2569995699","https://openalex.org/W2570365641","https://openalex.org/W2580786722","https://openalex.org/W2592122940","https://openalex.org/W2615068531","https://openalex.org/W2735138488","https://openalex.org/W2735589681","https://openalex.org/W2753923014","https://openalex.org/W2771060953","https://openalex.org/W2788257106","https://openalex.org/W2791982652","https://openalex.org/W2805655643","https://openalex.org/W2887975794","https://openalex.org/W2889633239","https://openalex.org/W2906493741","https://openalex.org/W2908498804","https://openalex.org/W2911475043","https://openalex.org/W2914058860","https://openalex.org/W2935677582","https://openalex.org/W2937055931","https://openalex.org/W2941947447","https://openalex.org/W2944582089","https://openalex.org/W2949537553","https://openalex.org/W2949783062","https://openalex.org/W2951269465","https://openalex.org/W2955617048","https://openalex.org/W2962686126","https://openalex.org/W2962802724","https://openalex.org/W2962809499","https://openalex.org/W2962837153","https://openalex.org/W2963134372","https://openalex.org/W2963198144","https://openalex.org/W2963283931","https://openalex.org/W2963349742","https://openalex.org/W2963561675","https://openalex.org/W2964199960","https://openalex.org/W2964325683","https://openalex.org/W2964371621","https://openalex.org/W2965974012","https://openalex.org/W2970375580","https://openalex.org/W2971926581","https://openalex.org/W2972936807","https://openalex.org/W2975272736","https://openalex.org/W2975272953","https://openalex.org/W2975606378","https://openalex.org/W2976279718","https://openalex.org/W2978229754","https://openalex.org/W2979057678","https://openalex.org/W2989744057","https://openalex.org/W2993276217","https://openalex.org/W3003721112","https://openalex.org/W3003918453","https://openalex.org/W3006411219","https://openalex.org/W3010622965","https://openalex.org/W3015846461","https://openalex.org/W3016892667","https://openalex.org/W3018864114","https://openalex.org/W3026400943","https://openalex.org/W3028579427","https://openalex.org/W3029287700","https://openalex.org/W3030897411","https://openalex.org/W3033084890","https://openalex.org/W3037403420","https://openalex.org/W3080129822","https://openalex.org/W3081119335","https://openalex.org/W3081211058","https://openalex.org/W3081324042","https://openalex.org/W3081373082","https://openalex.org/W3081460576","https://openalex.org/W3081669206","https://openalex.org/W3097193862","https://openalex.org/W3117245243","https://openalex.org/W3122167268","https://openalex.org/W3128220280","https://openalex.org/W3137381687","https://openalex.org/W3161798670","https://openalex.org/W3165181323","https://openalex.org/W3174451973","https://openalex.org/W4298227433","https://openalex.org/W6627489357","https://openalex.org/W6656576250","https://openalex.org/W6665204704","https://openalex.org/W6666485203","https://openalex.org/W6703773273","https://openalex.org/W6744141380","https://openalex.org/W6747734592","https://openalex.org/W6758833420","https://openalex.org/W6761559286","https://openalex.org/W6765493186","https://openalex.org/W6765764842","https://openalex.org/W6766689395","https://openalex.org/W6766998900","https://openalex.org/W6767322366","https://openalex.org/W6769562101","https://openalex.org/W6770330774","https://openalex.org/W6772987378","https://openalex.org/W6774618700","https://openalex.org/W6775647111","https://openalex.org/W6776619529","https://openalex.org/W6777425456","https://openalex.org/W6781899004","https://openalex.org/W6782677995","https://openalex.org/W6795419849"],"related_works":["https://openalex.org/W3164788607","https://openalex.org/W1985669994","https://openalex.org/W1574786390","https://openalex.org/W2523785889","https://openalex.org/W89842685","https://openalex.org/W11270324","https://openalex.org/W1967843471","https://openalex.org/W2096678291","https://openalex.org/W2566331944","https://openalex.org/W3011434214","https://openalex.org/W2078723936","https://openalex.org/W2933804994","https://openalex.org/W2500478934","https://openalex.org/W2523429299","https://openalex.org/W2188313446","https://openalex.org/W3148165398","https://openalex.org/W2892773221","https://openalex.org/W2182932155","https://openalex.org/W2564602748","https://openalex.org/W2471075222"],"abstract_inverted_index":{",":[0],"was":[1],"introduced":[2],"by":[3,54],"Vladimir":[4],"Levenshtein":[5],"two":[6,31],"decades":[7],"ago.":[8],"While":[9],"there":[10],"has":[11],"been":[12],"considerable":[13],"theoretical":[14,108],"work":[15],"on":[16,110],"trace":[17,91,99,111],"reconstruction,":[18,112],"practical":[19],"solutions":[20,129],"have":[21],"only":[22],"recently":[23],"started":[24],"to":[25,45,65,98,117],"emerge":[26],"in":[27],"the":[28,55,80,123],"context":[29],"of":[30,48,68,79,127],"rapidly":[32],"developing":[33],"research":[34,133],"areas:":[35],"immunogenomics":[36,102],"and":[37,94,103,113,125,130],"DNA":[38,60,69,104],"data":[39,61,81,105],"storage.":[40],"In":[41,59,84],"immunogenomics,":[42],"traces":[43,63],"correspond":[44,64],"mutated":[46],"copies":[47,67],"genes,":[49],"with":[50,75],"mutations":[51],"generated":[52],"naturally":[53],"adaptive":[56],"immune":[57],"system.":[58],"storage,":[62,106],"noisy":[66],"molecules":[70],"that":[71],"encode":[72],"digital":[73],"data,":[74],"errors":[76],"being":[77],"artifacts":[78],"retrieval":[82],"process.":[83],"this":[85],"paper,":[86],"we":[87,121],"introduce":[88],"several":[89],"new":[90],"generation":[92],"models":[93],"open":[95],"questions":[96],"relevant":[97],"reconstruction":[100],"for":[101],"survey":[107],"results":[109],"highlight":[114],"their":[115],"connections":[116],"computational":[118],"biology.":[119],"Throughout,":[120],"discuss":[122],"applicability":[124],"shortcomings":[126],"known":[128],"suggest":[131],"future":[132],"directions.":[134]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
