{"id":"https://openalex.org/W2001031594","doi":"https://doi.org/10.1109/tip.2014.2380178","title":"Background Fluorescence Estimation and Vesicle Segmentation in Live Cell Imaging With Conditional Random Fields","display_name":"Background Fluorescence Estimation and Vesicle Segmentation in Live Cell Imaging With Conditional Random Fields","publication_year":2014,"publication_date":"2014-12-12","ids":{"openalex":"https://openalex.org/W2001031594","doi":"https://doi.org/10.1109/tip.2014.2380178","mag":"2001031594","pmid":"https://pubmed.ncbi.nlm.nih.gov/25531952"},"language":"en","primary_location":{"id":"doi:10.1109/tip.2014.2380178","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tip.2014.2380178","pdf_url":null,"source":{"id":"https://openalex.org/S4210173141","display_name":"IEEE Transactions on Image Processing","issn_l":"1057-7149","issn":["1057-7149","1941-0042"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Image Processing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063131991","display_name":"Thierry P\u00e9cot","orcid":"https://orcid.org/0000-0003-0772-9753"},"institutions":[{"id":"https://openalex.org/I4210133778","display_name":"Centre Inria de l'Universit\u00e9 de Rennes","ror":"https://ror.org/04040yw90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210133778"]},{"id":"https://openalex.org/I4210159481","display_name":"Math\u00e9matiques et Informatique Appliqu\u00e9es du G\u00e9nome \u00e0 l'Environnement","ror":"https://ror.org/05qdnns64","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210088668","https://openalex.org/I4210159481"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Thierry Pecot","raw_affiliation_strings":["Cell and Tissue Imaging Facility-IBiSA, Institut Curie, Paris, France","Centre Rennes-Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique, Rennes, France","Math\u00e9matiques et Informatique Appliqu\u00e9es, Institut National de la Recherche Agronomique, Jouyen-en-Josas, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cell and Tissue Imaging Facility-IBiSA, Institut Curie, Paris, France","institution_ids":["https://openalex.org/I80043"]},{"raw_affiliation_string":"Centre Rennes-Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique, Rennes, France","institution_ids":["https://openalex.org/I4210133778"]},{"raw_affiliation_string":"Math\u00e9matiques et Informatique Appliqu\u00e9es, Institut National de la Recherche Agronomique, Jouyen-en-Josas, France","institution_ids":["https://openalex.org/I4210159481"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029961820","display_name":"Patrick Bouth\u00e9my","orcid":null},"institutions":[{"id":"https://openalex.org/I4210133778","display_name":"Centre Inria de l'Universit\u00e9 de Rennes","ror":"https://ror.org/04040yw90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210133778"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Patrick Bouthemy","raw_affiliation_strings":["Centre Rennes-Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique, Rennes, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre Rennes-Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique, Rennes, France","institution_ids":["https://openalex.org/I4210133778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075004436","display_name":"J\u00e9r\u00f4me Boulanger","orcid":"https://orcid.org/0000-0003-0237-3743"},"institutions":[{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jerome Boulanger","raw_affiliation_strings":["Centre National de la Recherche Scientifique, Institut Curie, Paris, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre National de la Recherche Scientifique, Institut Curie, Paris, France","institution_ids":["https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023449502","display_name":"Anatole Chessel","orcid":"https://orcid.org/0000-0002-1326-6305"},"institutions":[{"id":"https://openalex.org/I4210133778","display_name":"Centre Inria de l'Universit\u00e9 de Rennes","ror":"https://ror.org/04040yw90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210133778"]},{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Anatole Chessel","raw_affiliation_strings":["Centre National de la Recherche Scientifique, Institut Curie, Paris, France","Centre Rennes-Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique, Rennes, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre National de la Recherche Scientifique, Institut Curie, Paris, France","institution_ids":["https://openalex.org/I80043"]},{"raw_affiliation_string":"Centre Rennes-Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique, Rennes, France","institution_ids":["https://openalex.org/I4210133778"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088028597","display_name":"Sabine Bardin","orcid":null},"institutions":[{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sabine Bardin","raw_affiliation_strings":["Centre National de la Recherche Scientifique, Institut Curie, Paris, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre National de la Recherche Scientifique, Institut Curie, Paris, France","institution_ids":["https://openalex.org/I80043"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079455341","display_name":"Jean Salamero","orcid":"https://orcid.org/0000-0002-2610-5826"},"institutions":[{"id":"https://openalex.org/I80043","display_name":"Institut Curie","ror":"https://ror.org/04t0gwh46","country_code":"FR","type":"nonprofit","lineage":["https://openalex.org/I80043"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean Salamero","raw_affiliation_strings":["Cell and Tissue Imaging Facility-IBiSA, Institut Curie, Paris, France","Centre National de la Recherche Scientifique, Institut Curie, Paris, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cell and Tissue Imaging Facility-IBiSA, Institut Curie, Paris, France","institution_ids":["https://openalex.org/I80043"]},{"raw_affiliation_string":"Centre National de la Recherche Scientifique, Institut Curie, Paris, France","institution_ids":["https://openalex.org/I80043"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033807512","display_name":"Charles Kervrann","orcid":"https://orcid.org/0000-0001-6263-0452"},"institutions":[{"id":"https://openalex.org/I4210133778","display_name":"Centre Inria de l'Universit\u00e9 de Rennes","ror":"https://ror.org/04040yw90","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1326498283","https://openalex.org/I4210133778"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Charles Kervrann","raw_affiliation_strings":["Centre Rennes-Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique, Rennes, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Centre Rennes-Bretagne Atlantique, Institut National de Recherche en Informatique et en Automatique, Rennes, France","institution_ids":["https://openalex.org/I4210133778"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":3.5193,"has_fulltext":false,"cited_by_count":30,"citation_normalized_percentile":{"value":0.92003632,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"24","issue":"2","first_page":"667","last_page":"680"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/conditional-random-field","display_name":"Conditional random field","score":0.734710693359375},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.6681522130966187},{"id":"https://openalex.org/keywords/microscopy","display_name":"Microscopy","score":0.594593346118927},{"id":"https://openalex.org/keywords/fluorescence-microscope","display_name":"Fluorescence microscope","score":0.5711698532104492},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.5674729347229004},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5383203625679016},{"id":"https://openalex.org/keywords/live-cell-imaging","display_name":"Live cell imaging","score":0.5062469840049744},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.4913431704044342},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.47465282678604126},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4694995880126953},{"id":"https://openalex.org/keywords/video-microscopy","display_name":"Video microscopy","score":0.4550907611846924},{"id":"https://openalex.org/keywords/fluorescence-lifetime-imaging-microscopy","display_name":"Fluorescence-lifetime imaging microscopy","score":0.4310981035232544},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3918997049331665},{"id":"https://openalex.org/keywords/fluorescence","display_name":"Fluorescence","score":0.3155316412448883},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.2534435987472534},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.24981346726417542},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.22086751461029053},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16595789790153503},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.11675503849983215}],"concepts":[{"id":"https://openalex.org/C152565575","wikidata":"https://www.wikidata.org/wiki/Q1124538","display_name":"Conditional random field","level":2,"score":0.734710693359375},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.6681522130966187},{"id":"https://openalex.org/C147080431","wikidata":"https://www.wikidata.org/wiki/Q1074953","display_name":"Microscopy","level":2,"score":0.594593346118927},{"id":"https://openalex.org/C169274487","wikidata":"https://www.wikidata.org/wiki/Q840211","display_name":"Fluorescence microscope","level":3,"score":0.5711698532104492},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.5674729347229004},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5383203625679016},{"id":"https://openalex.org/C15526883","wikidata":"https://www.wikidata.org/wiki/Q6657126","display_name":"Live cell imaging","level":3,"score":0.5062469840049744},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.4913431704044342},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.47465282678604126},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4694995880126953},{"id":"https://openalex.org/C2993775838","wikidata":"https://www.wikidata.org/wiki/Q14943002","display_name":"Video microscopy","level":2,"score":0.4550907611846924},{"id":"https://openalex.org/C57477423","wikidata":"https://www.wikidata.org/wiki/Q1434196","display_name":"Fluorescence-lifetime imaging microscopy","level":3,"score":0.4310981035232544},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3918997049331665},{"id":"https://openalex.org/C91881484","wikidata":"https://www.wikidata.org/wiki/Q191807","display_name":"Fluorescence","level":2,"score":0.3155316412448883},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.2534435987472534},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.24981346726417542},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.22086751461029053},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16595789790153503},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.11675503849983215},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003584","descriptor_name":"Cytological Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003584","descriptor_name":"Cytological Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003584","descriptor_name":"Cytological Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D006367","descriptor_name":"HeLa Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006367","descriptor_name":"HeLa Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006367","descriptor_name":"HeLa Cells","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008856","descriptor_name":"Microscopy, Fluorescence","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D018715","descriptor_name":"Microscopy, Video","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018715","descriptor_name":"Microscopy, Video","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018715","descriptor_name":"Microscopy, Video","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020691","descriptor_name":"rab GTP-Binding Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020691","descriptor_name":"rab GTP-Binding Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020691","descriptor_name":"rab GTP-Binding Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049408","descriptor_name":"Luminescent Agents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049408","descriptor_name":"Luminescent Agents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049408","descriptor_name":"Luminescent Agents","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049452","descriptor_name":"Green Fluorescent Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049452","descriptor_name":"Green Fluorescent Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049452","descriptor_name":"Green Fluorescent Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1109/tip.2014.2380178","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tip.2014.2380178","pdf_url":null,"source":{"id":"https://openalex.org/S4210173141","display_name":"IEEE Transactions on Image Processing","issn_l":"1057-7149","issn":["1057-7149","1941-0042"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Image Processing","raw_type":"journal-article"},{"id":"pmid:25531952","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25531952","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on image processing : a publication of the IEEE Signal Processing Society","raw_type":null},{"id":"pmh:oai:HAL:hal-01103126v1","is_oa":false,"landing_page_url":"https://inria.hal.science/hal-01103126","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Transactions on Image Processing, 2015, 24 (2), pp.14. &#x27E8;10.1109/TIP.2014.2380178&#x27E9;","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.7300000190734863,"display_name":"Affordable and clean energy","id":"https://metadata.un.org/sdg/7"}],"awards":[{"id":"https://openalex.org/G1960712518","display_name":null,"funder_award_id":"ANR-10-INBS-04","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G872283308","display_name":"Syst\u00e8me microfluidique de tri et typage de cellules canc\u00e9reuses pour le diagnostic mol\u00e9culaire, le pronostic du risque m\u00e9tastatique, et la m\u00e9decine personnalis\u00e9e du cancer.","funder_award_id":"ANR-08-BIOT-0015","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320315862","display_name":"Infrastructures en Biologie Sant\u00e9 et Agronomie","ror":null},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320322892","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":71,"referenced_works":["https://openalex.org/W1505377038","https://openalex.org/W1508514374","https://openalex.org/W1546683379","https://openalex.org/W1600276254","https://openalex.org/W1608074891","https://openalex.org/W1614584563","https://openalex.org/W1656412062","https://openalex.org/W1884691121","https://openalex.org/W1936909041","https://openalex.org/W1964803612","https://openalex.org/W1973421894","https://openalex.org/W1987564626","https://openalex.org/W1995355073","https://openalex.org/W1995583822","https://openalex.org/W2020999234","https://openalex.org/W2027339406","https://openalex.org/W2029843133","https://openalex.org/W2034301798","https://openalex.org/W2046385387","https://openalex.org/W2049360731","https://openalex.org/W2049633694","https://openalex.org/W2071122929","https://openalex.org/W2071516577","https://openalex.org/W2073783182","https://openalex.org/W2074935554","https://openalex.org/W2077577088","https://openalex.org/W2080172043","https://openalex.org/W2083970667","https://openalex.org/W2090840279","https://openalex.org/W2091205354","https://openalex.org/W2091626637","https://openalex.org/W2103706175","https://openalex.org/W2105916176","https://openalex.org/W2108382860","https://openalex.org/W2109590726","https://openalex.org/W2112562104","https://openalex.org/W2113137767","https://openalex.org/W2119574456","https://openalex.org/W2120601853","https://openalex.org/W2121130721","https://openalex.org/W2124351162","https://openalex.org/W2125480112","https://openalex.org/W2129140439","https://openalex.org/W2130513366","https://openalex.org/W2131686571","https://openalex.org/W2133003941","https://openalex.org/W2133059825","https://openalex.org/W2136043254","https://openalex.org/W2136396015","https://openalex.org/W2139380751","https://openalex.org/W2143623375","https://openalex.org/W2147880316","https://openalex.org/W2150388917","https://openalex.org/W2151114449","https://openalex.org/W2152208045","https://openalex.org/W2155381538","https://openalex.org/W2157759988","https://openalex.org/W2157840858","https://openalex.org/W2164741953","https://openalex.org/W2167521584","https://openalex.org/W2168237413","https://openalex.org/W2169551590","https://openalex.org/W2489822048","https://openalex.org/W3122872465","https://openalex.org/W4230982142","https://openalex.org/W4256266823","https://openalex.org/W6632643893","https://openalex.org/W6636600324","https://openalex.org/W6668300935","https://openalex.org/W6679459161","https://openalex.org/W6682082992"],"related_works":["https://openalex.org/W2043023303","https://openalex.org/W144339231","https://openalex.org/W2006002803","https://openalex.org/W2398631311","https://openalex.org/W2059672839","https://openalex.org/W1966978880","https://openalex.org/W1983780159","https://openalex.org/W2062491242","https://openalex.org/W3134642825","https://openalex.org/W2042754901"],"abstract_inverted_index":{"Image":[0],"analysis":[1,130],"applied":[2],"to":[3,19,76,165],"fluorescence":[4,32,124,158],"live":[5],"cell":[6,178],"microscopy":[7,33,125],"has":[8],"become":[9],"a":[10,49,103,113],"key":[11],"tool":[12],"in":[13,23,82,123,157],"molecular":[14],"biology":[15],"since":[16],"it":[17],"enables":[18],"characterize":[20,166],"biological":[21],"processes":[22],"space":[24],"and":[25,64,93,169],"time":[26,135,139],"at":[27,68,176],"the":[28,35,59,69,78,83,143,146,154,167,177],"subcellular":[29],"level.":[30],"In":[31,54],"imaging,":[34],"moving":[36],"tagged":[37],"structures":[38],"of":[39,61,91,131,145,172],"interest,":[40],"such":[41],"as":[42,45],"vesicles,":[43],"appear":[44],"bright":[46],"spots":[47],"over":[48],"static":[50],"or":[51,136],"nonstatic":[52],"background.":[53],"this":[55,163],"paper,":[56],"we":[57],"consider":[58],"problem":[60,81],"vesicle":[62],"segmentation":[63,90],"time-varying":[65],"background":[66,94],"estimation":[67,95],"cellular":[70],"scale.":[71],"The":[72,108],"main":[73],"idea":[74],"is":[75],"formulate":[77],"joint":[79],"segmentation-estimation":[80],"general":[84],"conditional":[85],"random":[86],"field":[87],"framework.":[88],"Furthermore,":[89],"vesicles":[92],"are":[96],"alternatively":[97],"performed":[98],"by":[99],"energy":[100],"minimization":[101],"using":[102],"min":[104],"cut-max":[105],"flow":[106],"algorithm.":[107],"proposed":[109],"approach":[110,128],"relies":[111],"on":[112],"detection":[114],"measure":[115],"computed":[116],"from":[117],"intensity":[118],"contrasts":[119],"between":[120],"neighboring":[121],"blocks":[122],"images.":[126],"This":[127],"permits":[129],"either":[132],"2D":[133],"+":[134,138],"3D":[137],"data.":[140],"We":[141,160],"demonstrate":[142],"performance":[144],"so-called":[147],"C-CRAFT":[148],"through":[149],"an":[150],"experimental":[151],"comparison":[152],"with":[153],"state-of-the-art":[155],"methods":[156],"video-microscopy.":[159],"also":[161],"use":[162],"method":[164],"spatial":[168],"temporal":[170],"distribution":[171],"Rab6":[173],"transport":[174],"carriers":[175],"periphery":[179],"for":[180],"two":[181],"different":[182],"specific":[183],"adhesion":[184],"geometries.":[185]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":2},{"year":2015,"cited_by_count":7}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
