{"id":"https://openalex.org/W2771015627","doi":"https://doi.org/10.1109/tevc.2017.2774599","title":"Multiobjective Frog-Leaping Optimization for the Study of Ancestral Relationships in Protein Data","display_name":"Multiobjective Frog-Leaping Optimization for the Study of Ancestral Relationships in Protein Data","publication_year":2017,"publication_date":"2017-11-16","ids":{"openalex":"https://openalex.org/W2771015627","doi":"https://doi.org/10.1109/tevc.2017.2774599","mag":"2771015627"},"language":"en","primary_location":{"id":"doi:10.1109/tevc.2017.2774599","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tevc.2017.2774599","pdf_url":null,"source":{"id":"https://openalex.org/S93787993","display_name":"IEEE Transactions on Evolutionary Computation","issn_l":"1089-778X","issn":["1089-778X","1941-0026"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Evolutionary Computation","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"http://hdl.handle.net/10662/19104","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044896136","display_name":"Sergio Santander\u2010Jim\u00e9nez","orcid":null},"institutions":[{"id":"https://openalex.org/I121345201","display_name":"Instituto de Engenharia de Sistemas e Computadores Investiga\u00e7\u00e3o e Desenvolvimento","ror":"https://ror.org/04mqy3p58","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I121345201","https://openalex.org/I4210125590"]},{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":true,"raw_author_name":"Sergio Santander-Jimenez","raw_affiliation_strings":["INESC-ID, Instituto Superior T\u00e9cnico, Universidade de Lisboa, Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"INESC-ID, Instituto Superior T\u00e9cnico, Universidade de Lisboa, Lisbon, Portugal","institution_ids":["https://openalex.org/I121345201","https://openalex.org/I141596103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049408851","display_name":"Miguel A. Vega\u2010Rodr\u00edguez","orcid":"https://orcid.org/0000-0002-3003-758X"},"institutions":[{"id":"https://openalex.org/I80606768","display_name":"Universidad de Extremadura","ror":"https://ror.org/0174shg90","country_code":"ES","type":"education","lineage":["https://openalex.org/I80606768"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Miguel A. Vega-Rodriguez","raw_affiliation_strings":["Department of Computer and Communications Technologies, University of Extremadura, C\u00e1ceres, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Computer and Communications Technologies, University of Extremadura, C\u00e1ceres, Spain","institution_ids":["https://openalex.org/I80606768"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077537777","display_name":"Leonel Sousa","orcid":"https://orcid.org/0000-0002-8066-221X"},"institutions":[{"id":"https://openalex.org/I121345201","display_name":"Instituto de Engenharia de Sistemas e Computadores Investiga\u00e7\u00e3o e Desenvolvimento","ror":"https://ror.org/04mqy3p58","country_code":"PT","type":"nonprofit","lineage":["https://openalex.org/I121345201","https://openalex.org/I4210125590"]},{"id":"https://openalex.org/I141596103","display_name":"University of Lisbon","ror":"https://ror.org/01c27hj86","country_code":"PT","type":"education","lineage":["https://openalex.org/I141596103"]}],"countries":["PT"],"is_corresponding":false,"raw_author_name":"Leonel Sousa","raw_affiliation_strings":["INESC-ID, Instituto Superior T\u00e9cnico, Universidade de Lisboa, Lisbon, Portugal"],"affiliations":[{"raw_affiliation_string":"INESC-ID, Instituto Superior T\u00e9cnico, Universidade de Lisboa, Lisbon, Portugal","institution_ids":["https://openalex.org/I121345201","https://openalex.org/I141596103"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5044896136"],"corresponding_institution_ids":["https://openalex.org/I121345201","https://openalex.org/I141596103"],"apc_list":null,"apc_paid":null,"fwci":0.4491,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.64601347,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"22","issue":"6","first_page":"879","last_page":"893"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7646507024765015},{"id":"https://openalex.org/keywords/metaheuristic","display_name":"Metaheuristic","score":0.750232458114624},{"id":"https://openalex.org/keywords/parallelism","display_name":"Parallelism (grammar)","score":0.6735895276069641},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.622186541557312},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6216413974761963},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5263575315475464},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3843114972114563},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.36379387974739075},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3315064013004303},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.22010073065757751},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12713655829429626},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08380109071731567}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7646507024765015},{"id":"https://openalex.org/C109718341","wikidata":"https://www.wikidata.org/wiki/Q1385229","display_name":"Metaheuristic","level":2,"score":0.750232458114624},{"id":"https://openalex.org/C2781172179","wikidata":"https://www.wikidata.org/wiki/Q853109","display_name":"Parallelism (grammar)","level":2,"score":0.6735895276069641},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.622186541557312},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6216413974761963},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5263575315475464},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3843114972114563},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.36379387974739075},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3315064013004303},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.22010073065757751},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12713655829429626},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08380109071731567},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/tevc.2017.2774599","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tevc.2017.2774599","pdf_url":null,"source":{"id":"https://openalex.org/S93787993","display_name":"IEEE Transactions on Evolutionary Computation","issn_l":"1089-778X","issn":["1089-778X","1941-0026"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Evolutionary Computation","raw_type":"journal-article"},{"id":"pmh:oai:dehesa.unex.es:10662/19104","is_oa":true,"landing_page_url":"http://hdl.handle.net/10662/19104","pdf_url":null,"source":{"id":"https://openalex.org/S4306401011","display_name":"Institutional Repository University of Extremadura (University of Extremadura)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I80606768","host_organization_name":"Universidad de Extremadura","host_organization_lineage":["https://openalex.org/I80606768"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"preprint"}],"best_oa_location":{"id":"pmh:oai:dehesa.unex.es:10662/19104","is_oa":true,"landing_page_url":"http://hdl.handle.net/10662/19104","pdf_url":null,"source":{"id":"https://openalex.org/S4306401011","display_name":"Institutional Repository University of Extremadura (University of Extremadura)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I80606768","host_organization_name":"Universidad de Extremadura","host_organization_lineage":["https://openalex.org/I80606768"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"preprint"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1202009969","display_name":null,"funder_award_id":"TIN2016-76259-P","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G309696157","display_name":null,"funder_award_id":"UID/CEC/50021/2013","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G3284537356","display_name":null,"funder_award_id":"SFRH/B","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G3453306988","display_name":null,"funder_award_id":"TIN2016-76259-P","funder_id":"https://openalex.org/F4320335598","funder_display_name":"Agencia Estatal de Investigaci\u00f3n"},{"id":"https://openalex.org/G5682075627","display_name":null,"funder_award_id":"UID/CEC/50021/2013","funder_id":"https://openalex.org/F4320335322","funder_display_name":"European Regional Development Fund"},{"id":"https://openalex.org/G5722645763","display_name":null,"funder_award_id":"SFRH/BP","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G6569773458","display_name":null,"funder_award_id":"SFRH/BPD/119220/2016","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"},{"id":"https://openalex.org/G724804869","display_name":null,"funder_award_id":"SFRH/","funder_id":"https://openalex.org/F4320334779","funder_display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia"}],"funders":[{"id":"https://openalex.org/F4320334779","display_name":"Funda\u00e7\u00e3o para a Ci\u00eancia e a Tecnologia","ror":"https://ror.org/00snfqn58"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320335598","display_name":"Agencia Estatal de Investigaci\u00f3n","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":57,"referenced_works":["https://openalex.org/W16571359","https://openalex.org/W76943028","https://openalex.org/W118581210","https://openalex.org/W1536133648","https://openalex.org/W1555915743","https://openalex.org/W1588375755","https://openalex.org/W1594483597","https://openalex.org/W1768797947","https://openalex.org/W1925468470","https://openalex.org/W1970414500","https://openalex.org/W1973933837","https://openalex.org/W1985059684","https://openalex.org/W1990284472","https://openalex.org/W1993276924","https://openalex.org/W1994114449","https://openalex.org/W2005746024","https://openalex.org/W2009543464","https://openalex.org/W2011397439","https://openalex.org/W2017519756","https://openalex.org/W2027440639","https://openalex.org/W2038456806","https://openalex.org/W2050224901","https://openalex.org/W2056528862","https://openalex.org/W2066459641","https://openalex.org/W2084289491","https://openalex.org/W2098732866","https://openalex.org/W2100820635","https://openalex.org/W2101464940","https://openalex.org/W2103088017","https://openalex.org/W2106905228","https://openalex.org/W2108623228","https://openalex.org/W2111647009","https://openalex.org/W2125514467","https://openalex.org/W2126105956","https://openalex.org/W2128766881","https://openalex.org/W2136770880","https://openalex.org/W2141052558","https://openalex.org/W2148698435","https://openalex.org/W2151321774","https://openalex.org/W2160046277","https://openalex.org/W2163627198","https://openalex.org/W2169616042","https://openalex.org/W2217234129","https://openalex.org/W2221546541","https://openalex.org/W2267531769","https://openalex.org/W2342577284","https://openalex.org/W2504514380","https://openalex.org/W2515764746","https://openalex.org/W2525263446","https://openalex.org/W2725179571","https://openalex.org/W4233359534","https://openalex.org/W4299995088","https://openalex.org/W6635437318","https://openalex.org/W6675475285","https://openalex.org/W6688953046","https://openalex.org/W6726057082","https://openalex.org/W6727707176"],"related_works":["https://openalex.org/W2789681586","https://openalex.org/W2794361564","https://openalex.org/W4243392960","https://openalex.org/W3156820950","https://openalex.org/W4232791346","https://openalex.org/W2971069100","https://openalex.org/W2504553392","https://openalex.org/W2331509522","https://openalex.org/W2937748796","https://openalex.org/W2135210976"],"abstract_inverted_index":{"Among":[0],"the":[1,17,23,31,40,49,65,81,88,103,120,130],"different":[2,97],"scientific":[3],"domains":[4],"where":[5],"metaheuristics":[6,59],"find":[7],"applicability,":[8],"bioinformatics":[9],"represents":[10],"a":[11,76],"particularly":[12],"challenging":[13],"field":[14],"due":[15],"to":[16,87,132],"multiple":[18],"complexity":[19],"factors":[20],"involved":[21],"in":[22,51,113],"processing":[24],"of":[25,33,43,67,92,106,119,122],"biological":[26,45],"data.":[27],"In":[28],"this":[29,93],"context,":[30],"exploration":[32],"protein":[34],"sequence":[35],"data":[36],"is":[37],"remarkably":[38],"increasing":[39],"temporal":[41],"demands":[42],"such":[44,142],"problems,":[46],"thus":[47],"motivating":[48],"interest":[50],"investigating":[52],"new":[53],"approaches":[54],"that":[55],"effectively":[56],"combine":[57],"bioinspired":[58],"and":[60,137],"parallelism.":[61],"This":[62],"paper":[63],"addresses":[64],"reconstruction":[66],"ancestral":[68],"relationships":[69],"from":[70],"amino":[71],"acid":[72],"sequences":[73],"by":[74],"using":[75,123],"multiobjective":[77],"approach":[78],"based":[79],"on":[80],"shuffled":[82],"frog-leaping":[83],"optimization":[84,144],"technique.":[85],"Due":[86],"inherent":[89],"parallel":[90,98,135],"nature":[91],"approach,":[94],"we":[95],"define":[96],"schemes":[99],"aimed":[100],"at":[101],"exploiting":[102],"computing":[104],"capabilities":[105],"modern":[107],"cluster":[108],"platforms.":[109],"The":[110],"experiments":[111],"performed":[112],"five":[114],"real":[115],"datasets":[116],"give":[117],"account":[118],"relevance":[121],"parallelism-aware":[124],"metaheuristic":[125],"designs,":[126],"as":[127,129],"well":[128],"need":[131],"consider":[133],"both":[134],"performance":[136],"solution":[138],"quality":[139],"when":[140],"tackling":[141],"difficult":[143],"scenarios.":[145]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}