{"id":"https://openalex.org/W4285188807","doi":"https://doi.org/10.1109/tetci.2022.3182354","title":"A Deep Integrated Framework for Predicting SARS-CoV2\u2013Human Protein-Protein Interaction","display_name":"A Deep Integrated Framework for Predicting SARS-CoV2\u2013Human Protein-Protein Interaction","publication_year":2022,"publication_date":"2022-06-24","ids":{"openalex":"https://openalex.org/W4285188807","doi":"https://doi.org/10.1109/tetci.2022.3182354"},"language":"en","primary_location":{"id":"doi:10.1109/tetci.2022.3182354","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tetci.2022.3182354","pdf_url":null,"source":{"id":"https://openalex.org/S4210210251","display_name":"IEEE Transactions on Emerging Topics in Computational Intelligence","issn_l":"2471-285X","issn":["2471-285X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Emerging Topics in Computational Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008522568","display_name":"Sumanta Ray","orcid":"https://orcid.org/0000-0002-3371-8516"},"institutions":[{"id":"https://openalex.org/I180765649","display_name":"Aliah University","ror":"https://ror.org/03rfycd69","country_code":"IN","type":"education","lineage":["https://openalex.org/I180765649"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Sumanta Ray","raw_affiliation_strings":["Department of Computer Science and Engineering, Aliah University, Kolkata, India","Health Analytics Network, PA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Aliah University, Kolkata, India","institution_ids":["https://openalex.org/I180765649"]},{"raw_affiliation_string":"Health Analytics Network, PA, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060972599","display_name":"Snehalika Lall","orcid":"https://orcid.org/0000-0002-6694-5344"},"institutions":[{"id":"https://openalex.org/I6498739","display_name":"Indian Statistical Institute","ror":"https://ror.org/00q2w1j53","country_code":"IN","type":"education","lineage":["https://openalex.org/I6498739"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Snehalika Lall","raw_affiliation_strings":["Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India"],"affiliations":[{"raw_affiliation_string":"Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India","institution_ids":["https://openalex.org/I6498739"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007160886","display_name":"Sanghamitra Bandyopadhyay","orcid":"https://orcid.org/0000-0002-1490-3599"},"institutions":[{"id":"https://openalex.org/I6498739","display_name":"Indian Statistical Institute","ror":"https://ror.org/00q2w1j53","country_code":"IN","type":"education","lineage":["https://openalex.org/I6498739"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Sanghamitra Bandyopadhyay","raw_affiliation_strings":["Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India"],"affiliations":[{"raw_affiliation_string":"Machine Intelligence Unit, Indian Statistical Institute, Kolkata, India","institution_ids":["https://openalex.org/I6498739"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5008522568"],"corresponding_institution_ids":["https://openalex.org/I180765649"],"apc_list":null,"apc_paid":null,"fwci":2.3373,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.89783445,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"6","issue":"6","first_page":"1463","last_page":"1472"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9656999707221985,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6025225520133972},{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.5663780570030212},{"id":"https://openalex.org/keywords/drugbank","display_name":"DrugBank","score":0.555810809135437},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5074402689933777},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.5062002539634705},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.48505324125289917},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.4846673309803009},{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.4464348554611206},{"id":"https://openalex.org/keywords/repurposing","display_name":"Repurposing","score":0.43910977244377136},{"id":"https://openalex.org/keywords/interaction-network","display_name":"Interaction network","score":0.434966117143631},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3547394871711731},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.263952374458313},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19005942344665527},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.17112165689468384},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1256369650363922}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6025225520133972},{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.5663780570030212},{"id":"https://openalex.org/C155261790","wikidata":"https://www.wikidata.org/wiki/Q1122544","display_name":"DrugBank","level":3,"score":0.555810809135437},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5074402689933777},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.5062002539634705},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.48505324125289917},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.4846673309803009},{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.4464348554611206},{"id":"https://openalex.org/C519536355","wikidata":"https://www.wikidata.org/wiki/Q21021151","display_name":"Repurposing","level":2,"score":0.43910977244377136},{"id":"https://openalex.org/C55105296","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interaction network","level":3,"score":0.434966117143631},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3547394871711731},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.263952374458313},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19005942344665527},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.17112165689468384},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1256369650363922},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/tetci.2022.3182354","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tetci.2022.3182354","pdf_url":null,"source":{"id":"https://openalex.org/S4210210251","display_name":"IEEE Transactions on Emerging Topics in Computational Intelligence","issn_l":"2471-285X","issn":["2471-285X"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Emerging Topics in Computational Intelligence","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.4699999988079071,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W1994803330","https://openalex.org/W2014299676","https://openalex.org/W2033727482","https://openalex.org/W2048597491","https://openalex.org/W2078990125","https://openalex.org/W2081375228","https://openalex.org/W2098466244","https://openalex.org/W2100761975","https://openalex.org/W2101259397","https://openalex.org/W2113038532","https://openalex.org/W2114268578","https://openalex.org/W2126684705","https://openalex.org/W2128049108","https://openalex.org/W2134672568","https://openalex.org/W2160103276","https://openalex.org/W2163038531","https://openalex.org/W2173591891","https://openalex.org/W2272509401","https://openalex.org/W2558632230","https://openalex.org/W2597194099","https://openalex.org/W2612467560","https://openalex.org/W2718090702","https://openalex.org/W2747877289","https://openalex.org/W2757983152","https://openalex.org/W2766967608","https://openalex.org/W2767621347","https://openalex.org/W2774766727","https://openalex.org/W2885821429","https://openalex.org/W2921026906","https://openalex.org/W2962756421","https://openalex.org/W2998220730","https://openalex.org/W3003217347","https://openalex.org/W3010190156","https://openalex.org/W3011072970","https://openalex.org/W3014476243","https://openalex.org/W3015964336","https://openalex.org/W3022285953","https://openalex.org/W3131645963","https://openalex.org/W3138130200","https://openalex.org/W3158868742","https://openalex.org/W4226314490","https://openalex.org/W4294170691","https://openalex.org/W6682691769","https://openalex.org/W6775713369","https://openalex.org/W6913242862"],"related_works":["https://openalex.org/W2899096130","https://openalex.org/W3190782215","https://openalex.org/W2902729297","https://openalex.org/W3110500039","https://openalex.org/W4206422705","https://openalex.org/W4255531208","https://openalex.org/W4320009247","https://openalex.org/W4387572939","https://openalex.org/W4285394780","https://openalex.org/W2998254619"],"abstract_inverted_index":{"Drug":[0],"repurposing":[1],"for":[2,40,124],"COVID-19":[3],"is":[4],"now":[5],"an":[6,86],"actively":[7],"developing":[8],"area":[9],"of":[10,13,17,28,58],"research.":[11],"Unavailability":[12],"a":[14,35,62,67,113,136],"proper":[15],"set":[16,27],"interactions":[18,104],"between":[19,45,139],"SARS-CoV2":[20,46,73,127],"and":[21,47,80,102,143],"human":[22,48,76,83],"host":[23,49,77,118],"proteins":[24,78,119,142],"limits":[25],"the":[26,55,81,107,117,133,140],"possible":[29],"drug-targets.":[30],"Toward":[31],"this,":[32],"we":[33,90,111],"propose":[34],"deep":[36],"learning":[37],"based":[38],"methodology":[39],"high":[41],"confidence":[42],"interaction":[43,69],"prediction":[44,108],"proteins.":[50,128],"First,":[51],"our":[52],"technique":[53],"leverage":[54],"landmark":[56],"advantage":[57],"Node2Vec":[59],"to":[60,93,115,147],"produce":[61],"low":[63],"dimensional":[64],"embedding":[65],"from":[66,96],"compiled":[68],"network":[70],"that":[71,120],"puts":[72],"proteins,":[74],"target":[75,125],"(CoV-host),":[79],"whole":[82],"interactome":[84],"into":[85],"encompassing":[87],"context.":[88],"Second,":[89],"can":[91],"able":[92],"combine":[94],"information":[95,105],"protein":[97],"sequence,":[98],"gene":[99],"ontology":[100],"terms":[101],"physical":[103],"in":[106],"task.":[109],"Third,":[110],"proposed":[112],"way":[114],"rank":[116],"are":[121],"potential":[122],"candidate":[123],"by":[126],"Last":[129],"but":[130],"not":[131],"least":[132],"method":[134],"supports":[135],"meaningful":[137],"connection":[138],"predicted":[141],"different":[144],"repurposable":[145],"drugs":[146],"use":[148],"against":[149],"COVID-19.":[150]},"counts_by_year":[{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
