{"id":"https://openalex.org/W2919680359","doi":"https://doi.org/10.1109/tencon.2018.8650528","title":"On Optimizing DNA Sequence Design for DNA Logic AND Circuit","display_name":"On Optimizing DNA Sequence Design for DNA Logic AND Circuit","publication_year":2018,"publication_date":"2018-10-01","ids":{"openalex":"https://openalex.org/W2919680359","doi":"https://doi.org/10.1109/tencon.2018.8650528","mag":"2919680359"},"language":"en","primary_location":{"id":"doi:10.1109/tencon.2018.8650528","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tencon.2018.8650528","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"TENCON 2018 - 2018 IEEE Region 10 Conference","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5055019763","display_name":"Boonsit Yimwadsana","orcid":null},"institutions":[{"id":"https://openalex.org/I25399158","display_name":"Mahidol University","ror":"https://ror.org/01znkr924","country_code":"TH","type":"education","lineage":["https://openalex.org/I25399158"]}],"countries":["TH"],"is_corresponding":true,"raw_author_name":"Boonsit Yimwadsana","raw_affiliation_strings":["Faculty of Information and Communication Technology, Mahidol University, Nakhonpathom, Thailand"],"affiliations":[{"raw_affiliation_string":"Faculty of Information and Communication Technology, Mahidol University, Nakhonpathom, Thailand","institution_ids":["https://openalex.org/I25399158"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007675093","display_name":"Paramita Artiwet","orcid":null},"institutions":[{"id":"https://openalex.org/I25399158","display_name":"Mahidol University","ror":"https://ror.org/01znkr924","country_code":"TH","type":"education","lineage":["https://openalex.org/I25399158"]}],"countries":["TH"],"is_corresponding":false,"raw_author_name":"Paramita Artiwet","raw_affiliation_strings":["Faculty of Information and Communication Technology, Mahidol University, Nakhonpathom, Thailand"],"affiliations":[{"raw_affiliation_string":"Faculty of Information and Communication Technology, Mahidol University, Nakhonpathom, Thailand","institution_ids":["https://openalex.org/I25399158"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5055019763"],"corresponding_institution_ids":["https://openalex.org/I25399158"],"apc_list":null,"apc_paid":null,"fwci":0.1838,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.54321744,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"1585","issue":null,"first_page":"1828","last_page":"1833"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10207","display_name":"Advanced biosensing and bioanalysis techniques","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10432","display_name":"DNA and Nucleic Acid Chemistry","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/logic-gate","display_name":"Logic gate","score":0.6857688426971436},{"id":"https://openalex.org/keywords/dna-computing","display_name":"DNA computing","score":0.5719342231750488},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5511115789413452},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.5433328151702881},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4834533631801605},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.44181740283966064},{"id":"https://openalex.org/keywords/nor-logic","display_name":"NOR logic","score":0.4340035021305084},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4205900728702545},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.40079769492149353},{"id":"https://openalex.org/keywords/logic-synthesis","display_name":"Logic synthesis","score":0.3186805844306946},{"id":"https://openalex.org/keywords/logic-family","display_name":"Logic family","score":0.3019542992115021},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22373777627944946},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.15579107403755188}],"concepts":[{"id":"https://openalex.org/C131017901","wikidata":"https://www.wikidata.org/wiki/Q170451","display_name":"Logic gate","level":2,"score":0.6857688426971436},{"id":"https://openalex.org/C82047324","wikidata":"https://www.wikidata.org/wiki/Q177126","display_name":"DNA computing","level":3,"score":0.5719342231750488},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5511115789413452},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.5433328151702881},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4834533631801605},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.44181740283966064},{"id":"https://openalex.org/C165862026","wikidata":"https://www.wikidata.org/wiki/Q670372","display_name":"NOR logic","level":5,"score":0.4340035021305084},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4205900728702545},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.40079769492149353},{"id":"https://openalex.org/C157922185","wikidata":"https://www.wikidata.org/wiki/Q173198","display_name":"Logic synthesis","level":3,"score":0.3186805844306946},{"id":"https://openalex.org/C162454741","wikidata":"https://www.wikidata.org/wiki/Q173359","display_name":"Logic family","level":4,"score":0.3019542992115021},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22373777627944946},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15579107403755188},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/tencon.2018.8650528","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tencon.2018.8650528","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"TENCON 2018 - 2018 IEEE Region 10 Conference","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":6,"referenced_works":["https://openalex.org/W1761430420","https://openalex.org/W1964928696","https://openalex.org/W2018255407","https://openalex.org/W2112333437","https://openalex.org/W6638099174","https://openalex.org/W6641311070"],"related_works":["https://openalex.org/W1966764473","https://openalex.org/W2098419840","https://openalex.org/W2151687972","https://openalex.org/W2526300902","https://openalex.org/W2121963733","https://openalex.org/W1977171228","https://openalex.org/W2170504327","https://openalex.org/W2044930572","https://openalex.org/W4249951793","https://openalex.org/W1990901299"],"abstract_inverted_index":{"DNA":[0,13,22,40,48,79,101,130,137,149],"logic":[1,14,23,45,82,90,138,150],"circuit":[2],"is":[3,50,143,159],"a":[4,51,95,123,144,180],"popular":[5],"research":[6,119],"topic":[7],"in":[8,193,207,239],"biological":[9,202],"computing.":[10],"Initially,":[11],"simple":[12,28],"gates":[15,46,83,91],"were":[16,25,30,185],"introduced.":[17],"Later":[18],"on,":[19],"models":[20],"of":[21,39,56,59,64,68,78,89,97,111,146,177,216],"circuits":[24,29],"proposed":[26],"and":[27,70,169,209],"successfully":[31],"demonstrated.":[32],"This":[33,141,230],"paves":[34],"way":[35],"for":[36,99],"the":[37,57,71,127,171,189,201,210,217,220],"invention":[38],"computers.":[41],"However,":[42],"constructing":[43,178],"efficient":[44],"from":[47,106,219,236],"materials":[49],"very":[52],"complex":[53],"task":[54],"because":[55,92],"properties":[58],"DNA,":[60],"which":[61,125],"consists":[62],"only":[63,108],"4":[65],"different":[66,76,115],"types":[67,110],"nucleotides":[69,112],"chemical":[72],"bonding":[73,116],"possibilities":[74,98],"between":[75],"pairs":[77],"nucleotides.":[80],"Constructing":[81],"would":[84],"yield":[85,174],"unwanted":[86],"secondary":[87],"structures":[88,102],"there":[93],"are":[94],"lot":[96],"other":[100],"to":[103,114,121,132,135,160,195,200],"be":[104,133,153],"created":[105],"using":[107],"four":[109],"due":[113],"alignment":[117,167],"patterns.This":[118],"aims":[120],"develop":[122],"method":[124,158],"selects":[126],"most":[128],"suitable":[129],"sequence":[131],"used":[134],"construct":[136],"AND":[139],"gate.":[140],"work":[142],"proof":[145],"concept":[147],"that":[148,173,214],"gate":[151],"could":[152,222],"designed":[154],"more":[155],"efficiently.":[156],"Our":[157],"generate":[161],"all":[162,166],"possible":[163],"sequences":[164,172,184,198],"(considering":[165],"positions)":[168],"select":[170],"highest":[175,228],"possibility":[176],"such":[179],"structure.":[181],"The":[182],"selected":[183],"then":[186],"applied":[187],"with":[188,227],"primer":[190],"design":[191],"rules":[192],"order":[194],"filter":[196],"undesired":[197],"according":[199],"requirements.":[203],"We":[204],"performed":[205],"experiments":[206,238],"silico":[208],"experimental":[211],"results":[212],"showed":[213],"75%":[215],"outputs":[218],"application":[221],"form":[223],"our":[224],"expected":[225],"structure":[226],"probability.":[229],"significantly":[231],"helps":[232],"us":[233],"save":[234],"cost":[235],"running":[237],"vitro.":[240]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
