{"id":"https://openalex.org/W4407244952","doi":"https://doi.org/10.1109/tcyb.2026.3665161","title":"On the Number of Control Nodes in Boolean Networks With Degree Constraints","display_name":"On the Number of Control Nodes in Boolean Networks With Degree Constraints","publication_year":2026,"publication_date":"2026-02-26","ids":{"openalex":"https://openalex.org/W4407244952","doi":"https://doi.org/10.1109/tcyb.2026.3665161","pmid":"https://pubmed.ncbi.nlm.nih.gov/41747112"},"language":"en","primary_location":{"id":"doi:10.1109/tcyb.2026.3665161","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcyb.2026.3665161","pdf_url":null,"source":{"id":"https://openalex.org/S4210191041","display_name":"IEEE Transactions on Cybernetics","issn_l":"2168-2267","issn":["2168-2267","2168-2275"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Cybernetics","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2502.03839","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007492228","display_name":"Liangjie Sun","orcid":null},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]},{"id":"https://openalex.org/I4399598384","display_name":"Kyoto University Institute for Chemical Research","ror":"https://ror.org/0349bbg69","country_code":null,"type":"facility","lineage":["https://openalex.org/I22299242","https://openalex.org/I4399598384"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Liangjie Sun","raw_affiliation_strings":["Bioinformatics Center, Institute for Chemical Research, Kyoto University, Kyoto, Japan"],"raw_orcid":"https://orcid.org/0000-0003-0810-1431","affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Institute for Chemical Research, Kyoto University, Kyoto, Japan","institution_ids":["https://openalex.org/I22299242","https://openalex.org/I4399598384"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086061723","display_name":"Wai\u2010Ki Ching","orcid":"https://orcid.org/0000-0002-5785-3210"},"institutions":[{"id":"https://openalex.org/I889458895","display_name":"University of Hong Kong","ror":"https://ror.org/02zhqgq86","country_code":"HK","type":"education","lineage":["https://openalex.org/I889458895"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Wai-Ki Ching","raw_affiliation_strings":["Department of Mathematics, The University of Hong Kong, Pokfulam Road, Hong Kong"],"raw_orcid":"https://orcid.org/0000-0002-5785-3210","affiliations":[{"raw_affiliation_string":"Department of Mathematics, The University of Hong Kong, Pokfulam Road, Hong Kong","institution_ids":["https://openalex.org/I889458895"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016330265","display_name":"Tatsuya Akutsu","orcid":"https://orcid.org/0000-0001-9763-797X"},"institutions":[{"id":"https://openalex.org/I22299242","display_name":"Kyoto University","ror":"https://ror.org/02kpeqv85","country_code":"JP","type":"education","lineage":["https://openalex.org/I22299242"]},{"id":"https://openalex.org/I4399598384","display_name":"Kyoto University Institute for Chemical Research","ror":"https://ror.org/0349bbg69","country_code":null,"type":"facility","lineage":["https://openalex.org/I22299242","https://openalex.org/I4399598384"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tatsuya Akutsu","raw_affiliation_strings":["Bioinformatics Center, Institute for Chemical Research, Kyoto University, Kyoto, Japan"],"raw_orcid":"https://orcid.org/0000-0001-9763-797X","affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Institute for Chemical Research, Kyoto University, Kyoto, Japan","institution_ids":["https://openalex.org/I22299242","https://openalex.org/I4399598384"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00208977,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"56","issue":"4","first_page":"1859","last_page":"1871"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10142","display_name":"Formal Methods in Verification","score":0.9621999859809875,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/degree","display_name":"Degree (music)","score":0.7507932186126709},{"id":"https://openalex.org/keywords/control","display_name":"Control (management)","score":0.5928627252578735},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.516521155834198},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.4048615097999573},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.38541939854621887},{"id":"https://openalex.org/keywords/discrete-mathematics","display_name":"Discrete mathematics","score":0.35892385244369507},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11669892072677612},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.06918084621429443}],"concepts":[{"id":"https://openalex.org/C2775997480","wikidata":"https://www.wikidata.org/wiki/Q586277","display_name":"Degree (music)","level":2,"score":0.7507932186126709},{"id":"https://openalex.org/C2775924081","wikidata":"https://www.wikidata.org/wiki/Q55608371","display_name":"Control (management)","level":2,"score":0.5928627252578735},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.516521155834198},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.4048615097999573},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.38541939854621887},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.35892385244369507},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11669892072677612},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.06918084621429443},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1109/tcyb.2026.3665161","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcyb.2026.3665161","pdf_url":null,"source":{"id":"https://openalex.org/S4210191041","display_name":"IEEE Transactions on Cybernetics","issn_l":"2168-2267","issn":["2168-2267","2168-2275"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Cybernetics","raw_type":"journal-article"},{"id":"pmid:41747112","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41747112","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on cybernetics","raw_type":null},{"id":"pmh:oai:arXiv.org:2502.03839","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2502.03839","pdf_url":"https://arxiv.org/pdf/2502.03839","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:irdb.nii.ac.jp:01221:0007446832","is_oa":true,"landing_page_url":"http://hdl.handle.net/2433/301836","pdf_url":"https://repository.kulib.kyoto-u.ac.jp/bitstreams/c659611d-3b37-4902-9f23-c932f2331169/download","source":{"id":"https://openalex.org/S7407056385","display_name":"Institutional Repositories DataBase (IRDB)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184597095","host_organization_name":"National Institute of Informatics","host_organization_lineage":["https://openalex.org/I184597095"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Transactions on Cybernetics","raw_type":"journal article"},{"id":"pmh:doi:10.48550/arxiv.2502.03839","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4406922384","display_name":"Open MIND","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"publisher-specific-oa","license_id":"https://openalex.org/licenses/publisher-specific-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"doi:10.48550/arxiv.2502.03839","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2502.03839","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Preprint"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2502.03839","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2502.03839","pdf_url":"https://arxiv.org/pdf/2502.03839","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2652498698","display_name":"Analysis and Control of Steady States of Multiple Biological Networks","funder_award_id":"22K19830","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G6460038971","display_name":"Advanced Studies and Developments on Discrete Preimage Problems","funder_award_id":"22H00532","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G7686170885","display_name":"Cell-type Specific Control Methods Using Single Cell Gene Expression Data","funder_award_id":"23KF0243","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4407244952.pdf"},"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W1979597421","https://openalex.org/W2007980826","https://openalex.org/W2061531152","https://openalex.org/W3002753104","https://openalex.org/W2077600819","https://openalex.org/W2142036596","https://openalex.org/W2072657027","https://openalex.org/W2962838298","https://openalex.org/W2600246793"],"abstract_inverted_index":{"In":[0],"this":[1],"study,":[2],"we":[3],"analyze":[4],"the":[5,22,31,34,69,81,92,100,114,117,146,150,173,177,183],"minimum":[6,35,118],"control":[7,36,119],"node":[8,37,75,120],"set":[9,38],"problem":[10],"for":[11,113,157],"Boolean":[12],"networks":[13],"(BNs)":[14],"with":[15,61,86],"degree":[16],"constraints.":[17],"Our":[18],"major":[19],"contribution":[20],"is":[21,88],"derivation":[23],"of":[24,33,42,45,73,91,102,116,172],"nontrivial":[25],"lower":[26,123,130],"and":[27,63,71,80,104,132,153,166],"upper":[28,127,134],"bounds":[29,112,160],"on":[30],"size":[32,115],"through":[39],"combinatorial":[40],"analysis":[41],"four":[43,111],"types":[44],"BNs":[46],"(i.e.,":[47],"$k$":[48,50,53,55,57,59,64,66,78,82,84,94,96],"-":[49,54,58,65,83,95],"-XOR-BNs,":[51],"simple":[52,93],"-AND-BNs,":[56],"-AND-BNs":[60],"negation,":[62],"-NC-BNs,":[67],"where":[68],"indegree":[70],"outdegree":[72],"each":[74],"are":[76,136,161,168],"both":[77],",":[79],"-AND-BN":[85,97],"negation":[87,103],"an":[89],"extension":[90],"that":[98],"considers":[99],"occurrence":[101],"NC":[105],"means":[106],"nested":[107],"canalyzing).":[108],"More":[109],"specifically,":[110],"set:":[121],"general":[122,133],"bound,":[124,128,131],"best":[125],"case":[126],"worst-case":[129],"bound":[135],"analyzed.":[137],"By":[138],"dividing":[139],"nodes":[140],"into":[141],"three":[142],"disjoint":[143],"sets,":[144],"extending":[145],"time":[147],"to":[148,182],"reach":[149],"target":[151],"state,":[152],"utilizing":[154],"necessary":[155],"conditions":[156],"controllability,":[158],"these":[159],"obtained.":[162],"Further,":[163],"meaningful":[164],"results":[165,175],"phenomena":[167],"discovered.":[169],"Notably,":[170],"all":[171],"above":[174],"involving":[176],"AND":[178],"function":[179],"also":[180],"apply":[181],"OR":[184],"function.":[185]},"counts_by_year":[],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-02-08T00:00:00"}
