{"id":"https://openalex.org/W4384925003","doi":"https://doi.org/10.1109/tcyb.2023.3291369","title":"3DSN-Net: A 3-D Scale-Aware convNet With Nonlocal Context Guidance for Kidney and Tumor Segmentation From CT Volumes","display_name":"3DSN-Net: A 3-D Scale-Aware convNet With Nonlocal Context Guidance for Kidney and Tumor Segmentation From CT Volumes","publication_year":2023,"publication_date":"2023-07-20","ids":{"openalex":"https://openalex.org/W4384925003","doi":"https://doi.org/10.1109/tcyb.2023.3291369","pmid":"https://pubmed.ncbi.nlm.nih.gov/37471181"},"language":"en","primary_location":{"id":"doi:10.1109/tcyb.2023.3291369","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcyb.2023.3291369","pdf_url":null,"source":{"id":"https://openalex.org/S4210191041","display_name":"IEEE Transactions on Cybernetics","issn_l":"2168-2267","issn":["2168-2267","2168-2275"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Cybernetics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026540573","display_name":"Huisi Wu","orcid":"https://orcid.org/0000-0002-0399-9089"},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Huisi Wu","raw_affiliation_strings":["College of Computer Science and Software Engineering, Shenzhen University, Shenzhen, China"],"raw_orcid":"https://orcid.org/0000-0002-0399-9089","affiliations":[{"raw_affiliation_string":"College of Computer Science and Software Engineering, Shenzhen University, Shenzhen, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083377281","display_name":"Baiming Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Baiming Zhang","raw_affiliation_strings":["College of Computer Science and Software Engineering, Shenzhen University, Shenzhen, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Software Engineering, Shenzhen University, Shenzhen, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101792091","display_name":"Zhuoying Li","orcid":"https://orcid.org/0000-0002-9174-1140"},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhuoying Li","raw_affiliation_strings":["College of Computer Science and Software Engineering, Shenzhen University, Shenzhen, China"],"raw_orcid":"https://orcid.org/0000-0002-9174-1140","affiliations":[{"raw_affiliation_string":"College of Computer Science and Software Engineering, Shenzhen University, Shenzhen, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005393674","display_name":"Jing Qin","orcid":"https://orcid.org/0000-0002-2961-0860"},"institutions":[{"id":"https://openalex.org/I14243506","display_name":"Hong Kong Polytechnic University","ror":"https://ror.org/0030zas98","country_code":"HK","type":"education","lineage":["https://openalex.org/I14243506"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Jing Qin","raw_affiliation_strings":["Centre for Smart Health, School of Nursing, The Hong Kong Polytechnic University, Hong Kong, China","School of Nursing, Centre for Smart Health, The Hong Kong Polytechnic University, Hong Kong, Hong Kong"],"raw_orcid":"https://orcid.org/0000-0002-2961-0860","affiliations":[{"raw_affiliation_string":"Centre for Smart Health, School of Nursing, The Hong Kong Polytechnic University, Hong Kong, China","institution_ids":["https://openalex.org/I14243506"]},{"raw_affiliation_string":"School of Nursing, Centre for Smart Health, The Hong Kong Polytechnic University, Hong Kong, Hong Kong","institution_ids":["https://openalex.org/I14243506"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050657606","display_name":"Tong\u2010Yee Lee","orcid":"https://orcid.org/0000-0001-6699-2944"},"institutions":[{"id":"https://openalex.org/I91807558","display_name":"National Cheng Kung University","ror":"https://ror.org/01b8kcc49","country_code":"TW","type":"education","lineage":["https://openalex.org/I91807558"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Tong-Yee Lee","raw_affiliation_strings":["Department of Computer Science and Information Engineering, National Cheng-Kung University, Tainan, Taiwan"],"raw_orcid":"https://orcid.org/0000-0001-6699-2944","affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Engineering, National Cheng-Kung University, Tainan, Taiwan","institution_ids":["https://openalex.org/I91807558"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5026540573"],"corresponding_institution_ids":["https://openalex.org/I180726961"],"apc_list":null,"apc_paid":null,"fwci":2.9076,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.91118128,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"54","issue":"5","first_page":"3299","last_page":"3312"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12422","display_name":"Radiomics and Machine Learning in Medical Imaging","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12386","display_name":"Advanced X-ray and CT Imaging","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6967142820358276},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.6248335838317871},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.5905013680458069},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5205351114273071},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5189430713653564},{"id":"https://openalex.org/keywords/net","display_name":"Net (polyhedron)","score":0.5003705024719238},{"id":"https://openalex.org/keywords/geology","display_name":"Geology","score":0.2098282277584076},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.16830918192863464},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.16526153683662415},{"id":"https://openalex.org/keywords/cartography","display_name":"Cartography","score":0.15318447351455688},{"id":"https://openalex.org/keywords/geometry","display_name":"Geometry","score":0.06757444143295288},{"id":"https://openalex.org/keywords/paleontology","display_name":"Paleontology","score":0.04694563150405884}],"concepts":[{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6967142820358276},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.6248335838317871},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.5905013680458069},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5205351114273071},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5189430713653564},{"id":"https://openalex.org/C14166107","wikidata":"https://www.wikidata.org/wiki/Q253829","display_name":"Net (polyhedron)","level":2,"score":0.5003705024719238},{"id":"https://openalex.org/C127313418","wikidata":"https://www.wikidata.org/wiki/Q1069","display_name":"Geology","level":0,"score":0.2098282277584076},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.16830918192863464},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.16526153683662415},{"id":"https://openalex.org/C58640448","wikidata":"https://www.wikidata.org/wiki/Q42515","display_name":"Cartography","level":1,"score":0.15318447351455688},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.06757444143295288},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.04694563150405884}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007091","descriptor_name":"Image Processing, Computer-Assisted","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007668","descriptor_name":"Kidney","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D007668","descriptor_name":"Kidney","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D007668","descriptor_name":"Kidney","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014057","descriptor_name":"Tomography, X-Ray Computed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcyb.2023.3291369","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcyb.2023.3291369","pdf_url":null,"source":{"id":"https://openalex.org/S4210191041","display_name":"IEEE Transactions on Cybernetics","issn_l":"2168-2267","issn":["2168-2267","2168-2275"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Cybernetics","raw_type":"journal-article"},{"id":"pmid:37471181","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37471181","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on cybernetics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","score":0.550000011920929,"display_name":"Peace, Justice and strong institutions"},{"id":"https://metadata.un.org/sdg/10","score":0.46000000834465027,"display_name":"Reduced inequalities"}],"awards":[{"id":"https://openalex.org/G5286851128","display_name":null,"funder_award_id":"61973221","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6694410858","display_name":null,"funder_award_id":"62273241","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7868099426","display_name":null,"funder_award_id":"15218521","funder_id":"https://openalex.org/F4320321592","funder_display_name":"Research Grants Council, University Grants Committee"},{"id":"https://openalex.org/G8358568806","display_name":null,"funder_award_id":"2019A1515011165","funder_id":"https://openalex.org/F4320321921","funder_display_name":"Natural Science Foundation of Guangdong Province"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321592","display_name":"Research Grants Council, University Grants Committee","ror":"https://ror.org/00djwmt25"},{"id":"https://openalex.org/F4320321921","display_name":"Natural Science Foundation of Guangdong Province","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":74,"referenced_works":["https://openalex.org/W1677182931","https://openalex.org/W1901129140","https://openalex.org/W2005888349","https://openalex.org/W2101608218","https://openalex.org/W2104276184","https://openalex.org/W2115303260","https://openalex.org/W2123410556","https://openalex.org/W2301358467","https://openalex.org/W2342476115","https://openalex.org/W2412782625","https://openalex.org/W2464708700","https://openalex.org/W2560023338","https://openalex.org/W2604790786","https://openalex.org/W2791155853","https://openalex.org/W2791680898","https://openalex.org/W2792023360","https://openalex.org/W2798665804","https://openalex.org/W2799018616","https://openalex.org/W2805735218","https://openalex.org/W2810026089","https://openalex.org/W2811240690","https://openalex.org/W2895926103","https://openalex.org/W2910094941","https://openalex.org/W2933796343","https://openalex.org/W2939217524","https://openalex.org/W2952222533","https://openalex.org/W2963091558","https://openalex.org/W2964043069","https://openalex.org/W2964350391","https://openalex.org/W2971802465","https://openalex.org/W2981899103","https://openalex.org/W2990256448","https://openalex.org/W2990613241","https://openalex.org/W2994879149","https://openalex.org/W2996290406","https://openalex.org/W2997217064","https://openalex.org/W2998623274","https://openalex.org/W3002137088","https://openalex.org/W3009496543","https://openalex.org/W3012291630","https://openalex.org/W3013198566","https://openalex.org/W3014974815","https://openalex.org/W3021317468","https://openalex.org/W3024162568","https://openalex.org/W3035280441","https://openalex.org/W3035414587","https://openalex.org/W3043193945","https://openalex.org/W3090745929","https://openalex.org/W3091023070","https://openalex.org/W3091531370","https://openalex.org/W3098046820","https://openalex.org/W3100271703","https://openalex.org/W3101874879","https://openalex.org/W3109128945","https://openalex.org/W3126389275","https://openalex.org/W3127939367","https://openalex.org/W3137734413","https://openalex.org/W3164027647","https://openalex.org/W3165176148","https://openalex.org/W3174531399","https://openalex.org/W3194790201","https://openalex.org/W3195354427","https://openalex.org/W3198451673","https://openalex.org/W4210983935","https://openalex.org/W4220739817","https://openalex.org/W4223894216","https://openalex.org/W4226396138","https://openalex.org/W4288277460","https://openalex.org/W6631190155","https://openalex.org/W6750469568","https://openalex.org/W6751420435","https://openalex.org/W6761292208","https://openalex.org/W6766844300","https://openalex.org/W6910555300"],"related_works":["https://openalex.org/W2912321008","https://openalex.org/W1998607122","https://openalex.org/W2324368075","https://openalex.org/W2972124131","https://openalex.org/W338149487","https://openalex.org/W4403012196","https://openalex.org/W2972032537","https://openalex.org/W150363521","https://openalex.org/W3154107650","https://openalex.org/W2613671004"],"abstract_inverted_index":{"Automatic":[0],"kidney":[1,203],"and":[2,14,30,38,132,137,155,186,204,223],"tumor":[3,107,205,228],"segmentation":[4,103,184],"from":[5],"CT":[6],"volumes":[7],"is":[8,77,97],"a":[9,24,43,67,115,143,169,181],"critical":[10],"prerequisite/tool":[11],"for":[12,100,227],"diagnosis":[13],"surgical":[15],"treatment":[16],"(such":[17],"as":[18,28],"partial":[19],"nephrectomy).":[20],"However,":[21],"it":[22,54,60],"remains":[23],"particularly":[25,98,226],"challenging":[26,202],"issue":[27],"kidneys":[29,136],"tumors":[31],"often":[32],"exhibit":[33],"large-scale":[34],"variations,":[35],"irregular":[36,130],"shapes,":[37],"blurring":[39,133],"boundaries.":[40],"We":[41,189],"propose":[42,114],"novel":[44,116],"3-D":[45,144,215],"network":[46,158,187],"to":[47,86,124,128,160],"comprehensively":[48],"tackle":[49,129],"these":[50],"problems;":[51],"we":[52,113,167],"call":[53],"3DSN-Net.":[55],"Compared":[56],"with":[57,66,108,200,220],"existing":[58],"solutions,":[59],"has":[61],"two":[62],"compelling":[63],"characteristics.":[64],"First,":[65],"new":[68],"scale-aware":[69],"feature":[70,177],"extraction":[71],"(SAFE)":[72],"module,":[73],"the":[74,87,102,106,149,157,192,196],"proposed":[75,193],"3DSN-Net":[76,194],"capable":[78],"of":[79,89,92,105,135,140,151,176],"adaptively":[80],"selecting":[81],"appropriate":[82],"receptive":[83],"fields":[84],"according":[85],"sizes":[88],"targets":[90],"instead":[91],"indiscriminately":[93],"enlarging":[94],"them,":[95],"which":[96,147,179],"essential":[99],"improving":[101],"accuracy":[104,185],"large":[109],"scale":[110,221],"variation.":[111],"Second,":[112],"yet":[117],"efficient":[118],"nonlocal":[119],"context":[120],"guidance":[121],"(NCG)":[122],"mechanism":[123,172],"capture":[125],"global":[126],"dependencies":[127],"shapes":[131],"boundaries":[134],"tumors.":[138],"Instead":[139],"directly":[141],"harnessing":[142],"NCG":[145,171,224],"mechanism,":[146],"makes":[148],"number":[150],"parameters":[152],"exponentially":[153],"increase":[154],"hence":[156],"difficult":[159],"be":[161],"trained":[162],"under":[163],"limited":[164],"training":[165],"data,":[166],"develop":[168],"2.5D":[170],"based":[173],"on":[174,195],"projections":[175],"cubes,":[178],"achieves":[180],"tradeoff":[182],"between":[183],"complexity.":[188],"extensively":[190],"evaluate":[191],"famous":[197],"KiTS":[198],"dataset":[199],"many":[201],"cases.":[206],"Experimental":[207],"results":[208],"demonstrate":[209],"our":[210],"solution":[211],"consistently":[212],"outperforms":[213],"state-of-the-art":[214],"networks":[216],"after":[217],"being":[218],"equipped":[219],"aware":[222],"mechanisms,":[225],"segmentation.":[229]},"counts_by_year":[{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":4}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
