{"id":"https://openalex.org/W2789760262","doi":"https://doi.org/10.1109/tcst.2017.2789191","title":"Point-Based Methodology to Monitor and Control Gene Regulatory Networks via Noisy Measurements","display_name":"Point-Based Methodology to Monitor and Control Gene Regulatory Networks via Noisy Measurements","publication_year":2018,"publication_date":"2018-01-22","ids":{"openalex":"https://openalex.org/W2789760262","doi":"https://doi.org/10.1109/tcst.2017.2789191","mag":"2789760262"},"language":"en","primary_location":{"id":"doi:10.1109/tcst.2017.2789191","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcst.2017.2789191","pdf_url":null,"source":{"id":"https://openalex.org/S133363738","display_name":"IEEE Transactions on Control Systems Technology","issn_l":"1063-6536","issn":["1063-6536","1558-0865","2374-0159"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Control Systems Technology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017741575","display_name":"Mahdi Imani","orcid":"https://orcid.org/0000-0001-9570-9909"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Mahdi Imani","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, USA","Department of Electrical and Computer Engineering Texas A&M University College Station TX USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering Texas A&M University College Station TX USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026990034","display_name":"Ulisses Braga-Neto","orcid":"https://orcid.org/0000-0002-1210-2173"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ulisses M. Braga-Neto","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, USA","Department of Electrical and Computer Engineering Texas A&M University College Station TX USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering Texas A&M University College Station TX USA","institution_ids":["https://openalex.org/I91045830"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5017741575"],"corresponding_institution_ids":["https://openalex.org/I91045830"],"apc_list":null,"apc_paid":null,"fwci":2.2981,"has_fulltext":false,"cited_by_count":36,"citation_normalized_percentile":{"value":0.88994898,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"27","issue":"3","first_page":"1023","last_page":"1035"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9822999835014343,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9699000120162964,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.7006276249885559},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6812585592269897},{"id":"https://openalex.org/keywords/backup","display_name":"Backup","score":0.6414234638214111},{"id":"https://openalex.org/keywords/kalman-filter","display_name":"Kalman filter","score":0.5106447339057922},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4072592854499817},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3377334177494049},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.23016592860221863}],"concepts":[{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.7006276249885559},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6812585592269897},{"id":"https://openalex.org/C2780945871","wikidata":"https://www.wikidata.org/wiki/Q194274","display_name":"Backup","level":2,"score":0.6414234638214111},{"id":"https://openalex.org/C157286648","wikidata":"https://www.wikidata.org/wiki/Q846780","display_name":"Kalman filter","level":2,"score":0.5106447339057922},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4072592854499817},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3377334177494049},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.23016592860221863},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/tcst.2017.2789191","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcst.2017.2789191","pdf_url":null,"source":{"id":"https://openalex.org/S133363738","display_name":"IEEE Transactions on Control Systems Technology","issn_l":"1063-6536","issn":["1063-6536","1558-0865","2374-0159"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Control Systems Technology","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.5899999737739563,"display_name":"Partnerships for the goals"}],"awards":[{"id":"https://openalex.org/G4400843417","display_name":null,"funder_award_id":"CCF-1320884","funder_id":"https://openalex.org/F4320337387","funder_display_name":"Division of Computing and Communication Foundations"},{"id":"https://openalex.org/G6683873039","display_name":null,"funder_award_id":"CCF-1718924","funder_id":"https://openalex.org/F4320337387","funder_display_name":"Division of Computing and Communication Foundations"}],"funders":[{"id":"https://openalex.org/F4320337387","display_name":"Division of Computing and Communication Foundations","ror":"https://ror.org/01mng8331"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W1498235675","https://openalex.org/W1532688806","https://openalex.org/W1532781952","https://openalex.org/W1539216098","https://openalex.org/W1587601876","https://openalex.org/W1636455720","https://openalex.org/W1651215666","https://openalex.org/W1967233669","https://openalex.org/W1971224531","https://openalex.org/W1991720013","https://openalex.org/W2023186669","https://openalex.org/W2044375425","https://openalex.org/W2050840600","https://openalex.org/W2062029454","https://openalex.org/W2078460342","https://openalex.org/W2098432798","https://openalex.org/W2110962519","https://openalex.org/W2130721915","https://openalex.org/W2134802714","https://openalex.org/W2136433622","https://openalex.org/W2144088174","https://openalex.org/W2144913588","https://openalex.org/W2154431984","https://openalex.org/W2158907787","https://openalex.org/W2160904474","https://openalex.org/W2292227541","https://openalex.org/W2292828258","https://openalex.org/W2492996488","https://openalex.org/W2527751063","https://openalex.org/W2543669550","https://openalex.org/W2569862645","https://openalex.org/W2592482446","https://openalex.org/W2593147488","https://openalex.org/W2611370172","https://openalex.org/W2631613821","https://openalex.org/W2735499110","https://openalex.org/W2770822254","https://openalex.org/W2798747463","https://openalex.org/W2949905447","https://openalex.org/W4233622718","https://openalex.org/W4245662196","https://openalex.org/W4292691288","https://openalex.org/W6629490593","https://openalex.org/W6629701075","https://openalex.org/W6631864160","https://openalex.org/W6679977494","https://openalex.org/W6681718981"],"related_works":["https://openalex.org/W2955195711","https://openalex.org/W2354454611","https://openalex.org/W2993266126","https://openalex.org/W2392283887","https://openalex.org/W2351388597","https://openalex.org/W2939925694","https://openalex.org/W2829881200","https://openalex.org/W2184647741","https://openalex.org/W1974217798","https://openalex.org/W137535787"],"abstract_inverted_index":{"This":[0,71],"paper":[1],"proposes":[2],"a":[3,48,122,212,225],"methodology":[4,37,208],"to":[5,55,59,66,82,97,161],"monitor":[6],"and":[7,41,78,117,187],"control":[8,63,118,188],"gene":[9,220],"regulatory":[10],"networks":[11],"(GRNs)":[12],"via":[13],"noisy":[14],"measurements":[15],"in":[16,150,163,196],"an":[17],"infinite":[18],"observation":[19],"space.":[20],"Toward":[21],"this":[22],"end,":[23],"we":[24],"employ":[25],"the":[26,45,56,61,67,84,88,91,98,107,112,128,134,139,147,151,169,173,176,182,190,206],"partially":[27],"observed":[28],"Boolean":[29,140],"dynamical":[30],"system":[31,164],"(POBDS)":[32],"signal":[33],"model.":[34],"The":[35,154,179,203],"proposed":[36,207],"consists":[38],"of":[39,50,90,93,100,109,167,175,181,201,205,215],"offline":[40,46,152,177],"online":[42,68,113,155,191],"steps.":[43],"In":[44,111],"step,":[47,114],"family":[49],"point-based":[51,102],"methods":[52],"is":[53,72,119,209],"applied":[54],"POBDS":[57,135],"model":[58],"gather":[60],"necessary":[62],"policy":[64],"prior":[65],"(execution)":[69],"step.":[70,153,178],"accomplished":[73],"by":[74,121],"developing":[75],"efficient":[76],"backup":[77],"belief":[79],"expansion":[80],"processes":[81],"make":[83],"computation":[85],"scale":[86],"with":[87,106],"log":[89],"number":[92,108],"states,":[94],"as":[95,138,144,146],"opposed":[96],"complexity":[99],"existing":[101],"methods,":[103],"which":[104],"grows":[105],"states.":[110],"simultaneous":[115,185],"monitoring":[116,186],"achieved":[120],"one-step":[123,156],"look-ahead":[124,157],"search":[125],"procedure":[126],"using":[127,218],"optimal":[129],"state":[130],"estimation":[131],"algorithm":[132],"for":[133,184],"model,":[136],"known":[137],"Kalman":[141],"filter":[142],"(BKF),":[143],"well":[145],"information":[148],"gathered":[149],"process":[158,171],"confers":[159],"robustness":[160],"changes":[162],"dynamics,":[165],"possibility":[166],"starting":[168],"execution":[170],"before":[172],"completion":[174],"use":[180],"BKF":[183],"during":[189],"stage":[192],"can":[193],"be":[194],"key":[195],"assessing":[197],"possible":[198],"side":[199],"effects":[200],"intervention.":[202],"performance":[204],"investigated":[210],"through":[211],"comprehensive":[213],"set":[214],"numerical":[216],"experiments":[217],"synthetic":[219],"expression":[221],"data":[222],"generated":[223],"from":[224],"melanoma":[226],"GRN.":[227]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
