{"id":"https://openalex.org/W2124678094","doi":"https://doi.org/10.1109/tci.2014.2371751","title":"Model-Based Iterative Reconstruction for Bright-Field Electron Tomography","display_name":"Model-Based Iterative Reconstruction for Bright-Field Electron Tomography","publication_year":2015,"publication_date":"2015-03-01","ids":{"openalex":"https://openalex.org/W2124678094","doi":"https://doi.org/10.1109/tci.2014.2371751","mag":"2124678094"},"language":"en","primary_location":{"id":"doi:10.1109/tci.2014.2371751","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tci.2014.2371751","pdf_url":null,"source":{"id":"https://openalex.org/S4210233665","display_name":"IEEE Transactions on Computational Imaging","issn_l":"2333-9403","issn":["2333-9403","2334-0118","2573-0436"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Computational Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077586593","display_name":"Singanallur Venkatakrishnan","orcid":"https://orcid.org/0000-0002-7637-4987"},"institutions":[{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. V. Venkatakrishnan","raw_affiliation_strings":["School of Electrical and Computer Engineering, Purdue University, West Lafayette, IN, USA","School of Electrical and Computer Engineering. Purdue University, West Lafayette, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Electrical and Computer Engineering, Purdue University, West Lafayette, IN, USA","institution_ids":["https://openalex.org/I219193219"]},{"raw_affiliation_string":"School of Electrical and Computer Engineering. Purdue University, West Lafayette, IN, USA","institution_ids":["https://openalex.org/I219193219"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048053170","display_name":"Lawrence F. Drummy","orcid":"https://orcid.org/0000-0002-6452-5768"},"institutions":[{"id":"https://openalex.org/I1280414376","display_name":"United States Air Force Research Laboratory","ror":"https://ror.org/02e2egq70","country_code":"US","type":"facility","lineage":["https://openalex.org/I1280414376","https://openalex.org/I1330347796","https://openalex.org/I4210102105","https://openalex.org/I4389425425"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lawrence F. Drummy","raw_affiliation_strings":["Materials and Manufacturing Directorate, Air Force Research Laboratory, Wright Patterson AFB, OH, USA","[Materials and Manufacturing Directorate, Air Force Research Laboratory, Wright-Patterson AFB, OH, USA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Materials and Manufacturing Directorate, Air Force Research Laboratory, Wright Patterson AFB, OH, USA","institution_ids":["https://openalex.org/I1280414376"]},{"raw_affiliation_string":"[Materials and Manufacturing Directorate, Air Force Research Laboratory, Wright-Patterson AFB, OH, USA]","institution_ids":["https://openalex.org/I1280414376"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051072937","display_name":"Michael Jackson","orcid":"https://orcid.org/0000-0002-9201-4738"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Michael Jackson","raw_affiliation_strings":["BlueQuartz Software, Springboro, OH, USA",", BlueQuartz Software, Springboro, OH, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BlueQuartz Software, Springboro, OH, USA","institution_ids":[]},{"raw_affiliation_string":", BlueQuartz Software, Springboro, OH, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112233409","display_name":"Marc De Graef","orcid":null},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marc De Graef","raw_affiliation_strings":["Department of Material Science and Engineering, Carnegie Mellon University, Pittsburgh, PA, USA","[Department of Material Science and Engineering, Carnegie Mellon University, Pittsburgh, PA, USA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Material Science and Engineering, Carnegie Mellon University, Pittsburgh, PA, USA","institution_ids":["https://openalex.org/I74973139"]},{"raw_affiliation_string":"[Department of Material Science and Engineering, Carnegie Mellon University, Pittsburgh, PA, USA]","institution_ids":["https://openalex.org/I74973139"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110157527","display_name":"Jeff Simmons","orcid":null},"institutions":[{"id":"https://openalex.org/I1280414376","display_name":"United States Air Force Research Laboratory","ror":"https://ror.org/02e2egq70","country_code":"US","type":"facility","lineage":["https://openalex.org/I1280414376","https://openalex.org/I1330347796","https://openalex.org/I4210102105","https://openalex.org/I4389425425"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeff Simmons","raw_affiliation_strings":["Materials and Manufacturing Directorate, Air Force Research Laboratory, Wright Patterson AFB, OH, USA","[Materials and Manufacturing Directorate, Air Force Research Laboratory, Wright-Patterson AFB, OH, USA]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Materials and Manufacturing Directorate, Air Force Research Laboratory, Wright Patterson AFB, OH, USA","institution_ids":["https://openalex.org/I1280414376"]},{"raw_affiliation_string":"[Materials and Manufacturing Directorate, Air Force Research Laboratory, Wright-Patterson AFB, OH, USA]","institution_ids":["https://openalex.org/I1280414376"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056657991","display_name":"Charles A. Bouman","orcid":"https://orcid.org/0000-0001-8504-0383"},"institutions":[{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Charles A. Bouman","raw_affiliation_strings":["School of Electrical and Computer Engineering, Purdue University, West Lafayette, IN, USA","School of Electrical and Computer Engineering. Purdue University, West Lafayette, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Electrical and Computer Engineering, Purdue University, West Lafayette, IN, USA","institution_ids":["https://openalex.org/I219193219"]},{"raw_affiliation_string":"School of Electrical and Computer Engineering. Purdue University, West Lafayette, IN, USA","institution_ids":["https://openalex.org/I219193219"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":10.1864,"has_fulltext":false,"cited_by_count":54,"citation_normalized_percentile":{"value":0.97395833,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"1","issue":"1","first_page":"1","last_page":"15"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10857","display_name":"Advanced Electron Microscopy Techniques and Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1315","display_name":"Structural Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10857","display_name":"Advanced Electron Microscopy Techniques and Applications","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1315","display_name":"Structural Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12039","display_name":"Electron and X-Ray Spectroscopy Techniques","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/2508","display_name":"Surfaces, Coatings and Films"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11183","display_name":"Advanced X-ray Imaging Techniques","score":0.9926999807357788,"subfield":{"id":"https://openalex.org/subfields/3108","display_name":"Radiation"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/iterative-reconstruction","display_name":"Iterative reconstruction","score":0.7935751676559448},{"id":"https://openalex.org/keywords/tomographic-reconstruction","display_name":"Tomographic reconstruction","score":0.6170228123664856},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5470037460327148},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5323216319084167},{"id":"https://openalex.org/keywords/reconstruction-algorithm","display_name":"Reconstruction algorithm","score":0.4873550832271576},{"id":"https://openalex.org/keywords/projection","display_name":"Projection (relational algebra)","score":0.46766531467437744},{"id":"https://openalex.org/keywords/iterative-method","display_name":"Iterative method","score":0.4496772289276123},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.4360814094543457},{"id":"https://openalex.org/keywords/tomography","display_name":"Tomography","score":0.4347284436225891},{"id":"https://openalex.org/keywords/image-quality","display_name":"Image quality","score":0.4107246696949005},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35948824882507324},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.3462415933609009},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.2624855637550354},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.1978141963481903}],"concepts":[{"id":"https://openalex.org/C141379421","wikidata":"https://www.wikidata.org/wiki/Q6094427","display_name":"Iterative reconstruction","level":2,"score":0.7935751676559448},{"id":"https://openalex.org/C97742081","wikidata":"https://www.wikidata.org/wiki/Q7820109","display_name":"Tomographic reconstruction","level":3,"score":0.6170228123664856},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5470037460327148},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5323216319084167},{"id":"https://openalex.org/C2779898584","wikidata":"https://www.wikidata.org/wiki/Q7820109","display_name":"Reconstruction algorithm","level":3,"score":0.4873550832271576},{"id":"https://openalex.org/C57493831","wikidata":"https://www.wikidata.org/wiki/Q3134666","display_name":"Projection (relational algebra)","level":2,"score":0.46766531467437744},{"id":"https://openalex.org/C159694833","wikidata":"https://www.wikidata.org/wiki/Q2321565","display_name":"Iterative method","level":2,"score":0.4496772289276123},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.4360814094543457},{"id":"https://openalex.org/C163716698","wikidata":"https://www.wikidata.org/wiki/Q841267","display_name":"Tomography","level":2,"score":0.4347284436225891},{"id":"https://openalex.org/C55020928","wikidata":"https://www.wikidata.org/wiki/Q3813865","display_name":"Image quality","level":3,"score":0.4107246696949005},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35948824882507324},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.3462415933609009},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.2624855637550354},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.1978141963481903}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/tci.2014.2371751","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tci.2014.2371751","pdf_url":null,"source":{"id":"https://openalex.org/S4210233665","display_name":"IEEE Transactions on Computational Imaging","issn_l":"2333-9403","issn":["2333-9403","2334-0118","2573-0436"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Computational Imaging","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/12","score":0.4699999988079071,"display_name":"Responsible consumption and production"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":37,"referenced_works":["https://openalex.org/W1506774439","https://openalex.org/W1514741044","https://openalex.org/W1586661374","https://openalex.org/W1972240851","https://openalex.org/W1982275784","https://openalex.org/W1982834064","https://openalex.org/W1986262252","https://openalex.org/W1991138453","https://openalex.org/W1996201751","https://openalex.org/W1997852946","https://openalex.org/W2003624223","https://openalex.org/W2012279567","https://openalex.org/W2019406644","https://openalex.org/W2021594562","https://openalex.org/W2025007543","https://openalex.org/W2025818287","https://openalex.org/W2037521346","https://openalex.org/W2048962123","https://openalex.org/W2050968963","https://openalex.org/W2053155454","https://openalex.org/W2063494315","https://openalex.org/W2068607374","https://openalex.org/W2078602456","https://openalex.org/W2089452694","https://openalex.org/W2101301278","https://openalex.org/W2104455572","https://openalex.org/W2110733023","https://openalex.org/W2118023603","https://openalex.org/W2127991955","https://openalex.org/W2136072534","https://openalex.org/W2136485351","https://openalex.org/W2141991262","https://openalex.org/W2142419873","https://openalex.org/W2144132602","https://openalex.org/W2161169693","https://openalex.org/W2165399609","https://openalex.org/W2166887721"],"related_works":["https://openalex.org/W2757389719","https://openalex.org/W2951714568","https://openalex.org/W1963814553","https://openalex.org/W2037595954","https://openalex.org/W1988158806","https://openalex.org/W2507293823","https://openalex.org/W2386146599","https://openalex.org/W2018015402","https://openalex.org/W2144778520","https://openalex.org/W2982317495"],"abstract_inverted_index":{"Bright-Field":[0],"(BF)":[1],"electron":[2],"tomography":[3],"(ET)":[4],"has":[5,31],"been":[6,32],"widely":[7],"used":[8],"in":[9,24,34,62],"the":[10,25,35,88,96,125,137,143,156,160,178],"life":[11,26],"sciences":[12,37],"for":[13,79,87,95,115,124,136,142,155],"3-D":[14,28,63],"imaging":[15,30],"of":[16,127,145,177],"biological":[17],"specimens.":[18],"However,":[19],"while":[20],"BF-ET":[21,29,116],"is":[22,75],"popular":[23],"sciences,":[27],"avoided":[33],"physical":[36],"due":[38],"to":[39,98,158,173,201],"measurement":[40,57,89],"anomalies":[41,58],"from":[42,118],"crystalline":[43,119],"samples":[44],"caused":[45],"by":[46,101],"dynamical":[47],"diffraction":[48],"effects":[49],"such":[50],"as":[51,185,187,199],"Bragg":[52],"scatter.":[53],"In":[54,107],"practice,":[55],"these":[56],"cause":[59],"undesirable":[60],"artifacts":[61],"reconstructions":[64,100],"computed":[65],"using":[66],"filtered":[67],"back-projection":[68],"(FBP).":[69],"Alternatively,":[70],"model-based":[71],"iterative":[72],"reconstruction":[73,81,117,197],"(MBIR)":[74],"a":[76,84,92,103,132,152,167,175],"powerful":[77],"framework":[78],"tomographic":[80],"that":[82,121,191],"combines":[83],"forward":[85,134],"model":[86,94,135,154],"system":[90,139],"and":[91,148,203],"prior":[93,153],"object":[97,157],"obtain":[99,159],"minimizing":[102],"single":[104],"cost":[105,162,180],"function.":[106,163,181],"this":[108],"paper,":[109],"we":[110],"present":[111],"an":[112],"MBIR":[113,161,205],"algorithm":[114,169],"materials":[120],"can":[122,194],"account":[123],"presence":[126,144],"anomalous":[128,146],"measurements.":[129],"We":[130,164],"propose":[131,166],"new":[133],"acquisition":[138],"which":[140],"accounts":[141],"measurements":[147],"combine":[149],"it":[150],"with":[151],"then":[165],"fast":[168],"based":[170],"on":[171,183],"majorization-minimization":[172],"find":[174],"minimum":[176],"corresponding":[179],"Results":[182],"simulated":[184],"well":[186],"real":[188],"data":[189],"show":[190],"our":[192],"method":[193],"dramatically":[195],"improve":[196],"quality":[198],"compared":[200],"FBP":[202],"conventional":[204],"without":[206],"anomaly":[207],"modeling.":[208]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
