{"id":"https://openalex.org/W2981948158","doi":"https://doi.org/10.1109/tcds.2019.2949195","title":"Modeling Brain Diverse and Complex Hemodynamic Response Patterns via Deep Recurrent Autoencoder","display_name":"Modeling Brain Diverse and Complex Hemodynamic Response Patterns via Deep Recurrent Autoencoder","publication_year":2019,"publication_date":"2019-10-25","ids":{"openalex":"https://openalex.org/W2981948158","doi":"https://doi.org/10.1109/tcds.2019.2949195","mag":"2981948158"},"language":"en","primary_location":{"id":"doi:10.1109/tcds.2019.2949195","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcds.2019.2949195","pdf_url":null,"source":{"id":"https://openalex.org/S2488537894","display_name":"IEEE Transactions on Cognitive and Developmental Systems","issn_l":"2379-8920","issn":["2379-8920","2379-8939"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Cognitive and Developmental Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060444719","display_name":"Yan Cui","orcid":"https://orcid.org/0000-0003-3627-3169"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan Cui","raw_affiliation_strings":["College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China"],"raw_orcid":"https://orcid.org/0000-0003-3627-3169","affiliations":[{"raw_affiliation_string":"College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080583315","display_name":"Shijie Zhao","orcid":"https://orcid.org/0000-0001-9102-5294"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shijie Zhao","raw_affiliation_strings":["School of Automation, Northwestern Polytechnical University, Xi\u2019an, China","School of Automation, Northwestern Polytechnical University, Xi'an, China"],"raw_orcid":"https://orcid.org/0000-0001-9102-5294","affiliations":[{"raw_affiliation_string":"School of Automation, Northwestern Polytechnical University, Xi\u2019an, China","institution_ids":["https://openalex.org/I17145004"]},{"raw_affiliation_string":"School of Automation, Northwestern Polytechnical University, Xi'an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008526350","display_name":"Yaowu Chen","orcid":"https://orcid.org/0000-0002-6037-0631"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yaowu Chen","raw_affiliation_strings":["College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China"],"raw_orcid":"https://orcid.org/0000-0002-6037-0631","affiliations":[{"raw_affiliation_string":"College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012529382","display_name":"Junwei Han","orcid":"https://orcid.org/0000-0001-5545-7217"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junwei Han","raw_affiliation_strings":["School of Automation, Northwestern Polytechnical University, Xi\u2019an, China","School of Automation, Northwestern Polytechnical University, Xi'an, China"],"raw_orcid":"https://orcid.org/0000-0001-5545-7217","affiliations":[{"raw_affiliation_string":"School of Automation, Northwestern Polytechnical University, Xi\u2019an, China","institution_ids":["https://openalex.org/I17145004"]},{"raw_affiliation_string":"School of Automation, Northwestern Polytechnical University, Xi'an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100344286","display_name":"Lei Guo","orcid":"https://orcid.org/0000-0003-0728-896X"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lei Guo","raw_affiliation_strings":["School of Automation, Northwestern Polytechnical University, Xi\u2019an, China","School of Automation, Northwestern Polytechnical University, Xi'an, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Automation, Northwestern Polytechnical University, Xi\u2019an, China","institution_ids":["https://openalex.org/I17145004"]},{"raw_affiliation_string":"School of Automation, Northwestern Polytechnical University, Xi'an, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101945816","display_name":"Li Xie","orcid":"https://orcid.org/0000-0001-7808-3115"},"institutions":[{"id":"https://openalex.org/I76130692","display_name":"Zhejiang University","ror":"https://ror.org/00a2xv884","country_code":"CN","type":"education","lineage":["https://openalex.org/I76130692"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Li Xie","raw_affiliation_strings":["College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Biomedical Engineering and Instrument Science, Zhejiang University, Hangzhou, China","institution_ids":["https://openalex.org/I76130692"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100647156","display_name":"Tianming Liu","orcid":"https://orcid.org/0000-0002-8132-9048"},"institutions":[{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tianming Liu","raw_affiliation_strings":["Cortical Architecture Imaging and Discovery Laboratory, University of Georgia, Athens, GA, USA"],"raw_orcid":"https://orcid.org/0000-0002-8132-9048","affiliations":[{"raw_affiliation_string":"Cortical Architecture Imaging and Discovery Laboratory, University of Georgia, Athens, GA, USA","institution_ids":["https://openalex.org/I165733156"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.1217,"has_fulltext":false,"cited_by_count":20,"citation_normalized_percentile":{"value":0.77207938,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"12","issue":"4","first_page":"733","last_page":"743"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10241","display_name":"Functional Brain Connectivity Studies","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10378","display_name":"Advanced MRI Techniques and Applications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10429","display_name":"EEG and Brain-Computer Interfaces","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/autoencoder","display_name":"Autoencoder","score":0.9455581903457642},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7943601608276367},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.7314161658287048},{"id":"https://openalex.org/keywords/recurrent-neural-network","display_name":"Recurrent neural network","score":0.6691668033599854},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.4595105051994324},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.45451048016548157},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4511888325214386},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.3482043147087097}],"concepts":[{"id":"https://openalex.org/C101738243","wikidata":"https://www.wikidata.org/wiki/Q786435","display_name":"Autoencoder","level":3,"score":0.9455581903457642},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7943601608276367},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.7314161658287048},{"id":"https://openalex.org/C147168706","wikidata":"https://www.wikidata.org/wiki/Q1457734","display_name":"Recurrent neural network","level":3,"score":0.6691668033599854},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.4595105051994324},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.45451048016548157},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4511888325214386},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.3482043147087097}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/tcds.2019.2949195","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcds.2019.2949195","pdf_url":null,"source":{"id":"https://openalex.org/S2488537894","display_name":"IEEE Transactions on Cognitive and Developmental Systems","issn_l":"2379-8920","issn":["2379-8920","2379-8939"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Cognitive and Developmental Systems","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1426293563","display_name":null,"funder_award_id":"61473231","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1732565104","display_name":null,"funder_award_id":"R01 DA-033393","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3294669256","display_name":null,"funder_award_id":"R01 AG-042599","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3934096719","display_name":null,"funder_award_id":"2019T120945","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G4471598409","display_name":null,"funder_award_id":"61806167","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5221618764","display_name":"\u8111\u7f51\u7edc\u7ed3\u6784\u4e0e\u529f\u80fd\u4fe1\u606f\u878d\u5408\u53ca\u8111\u75be\u75c5\u7814\u7a76","funder_award_id":"61333017","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6559534488","display_name":null,"funder_award_id":"3102019PJ005","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G6779670841","display_name":null,"funder_award_id":"31627802","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7362170419","display_name":null,"funder_award_id":"61522207","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7515157009","display_name":null,"funder_award_id":"U1801265","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321543","display_name":"China Postdoctoral Science Foundation","ror":"https://ror.org/0426zh255"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":64,"referenced_works":["https://openalex.org/W1522301498","https://openalex.org/W1533861849","https://openalex.org/W1598796236","https://openalex.org/W1905882502","https://openalex.org/W1910131649","https://openalex.org/W1973990950","https://openalex.org/W1974874858","https://openalex.org/W1983208069","https://openalex.org/W1983407432","https://openalex.org/W1983451956","https://openalex.org/W2012285157","https://openalex.org/W2017257315","https://openalex.org/W2024729467","https://openalex.org/W2037227137","https://openalex.org/W2064675550","https://openalex.org/W2071608556","https://openalex.org/W2072522618","https://openalex.org/W2082526668","https://openalex.org/W2092818848","https://openalex.org/W2107878631","https://openalex.org/W2115000201","https://openalex.org/W2115485420","https://openalex.org/W2116649573","https://openalex.org/W2117130368","https://openalex.org/W2117539524","https://openalex.org/W2126598020","https://openalex.org/W2136914185","https://openalex.org/W2137526583","https://openalex.org/W2157331557","https://openalex.org/W2160815625","https://openalex.org/W2170797424","https://openalex.org/W2238108400","https://openalex.org/W2257979135","https://openalex.org/W2284198383","https://openalex.org/W2310992461","https://openalex.org/W2343172899","https://openalex.org/W2343973580","https://openalex.org/W2344270078","https://openalex.org/W2409706469","https://openalex.org/W2508457464","https://openalex.org/W2533800772","https://openalex.org/W2592929672","https://openalex.org/W2618995589","https://openalex.org/W2622045104","https://openalex.org/W2623523497","https://openalex.org/W2625749968","https://openalex.org/W2748179009","https://openalex.org/W2750477048","https://openalex.org/W2792014014","https://openalex.org/W2805684238","https://openalex.org/W2891826996","https://openalex.org/W2895408507","https://openalex.org/W2898352483","https://openalex.org/W2900958169","https://openalex.org/W2901839825","https://openalex.org/W2907834378","https://openalex.org/W2964121744","https://openalex.org/W2977883299","https://openalex.org/W2979354197","https://openalex.org/W3101378249","https://openalex.org/W6631190155","https://openalex.org/W6631943919","https://openalex.org/W6635679246","https://openalex.org/W6738625524"],"related_works":["https://openalex.org/W3013693939","https://openalex.org/W2159052453","https://openalex.org/W2566616303","https://openalex.org/W3131327266","https://openalex.org/W4297051394","https://openalex.org/W2752972570","https://openalex.org/W2669956259","https://openalex.org/W4249005693","https://openalex.org/W3008584592","https://openalex.org/W4380075502"],"abstract_inverted_index":{"For":[0],"decades,":[1],"a":[2,105],"variety":[3],"of":[4,63,80,86,94,109,125,161],"task-based":[5],"functional":[6,47,143],"MRI":[7],"(tfMRI)":[8],"data":[9],"analysis":[10,26],"approaches":[11],"have":[12,55,68],"been":[13,69],"developed,":[14],"including":[15],"the":[16,41,77,81,92,126,132,136,141,159,162,169],"general":[17],"linear":[18],"model":[19,128,165],"(GLM),":[20],"sparse":[21],"representations,":[22],"and":[23,35,44,88,135,146,149,171],"independent":[24],"component":[25],"(ICA).":[27],"However,":[28],"these":[29],"methods":[30],"are":[31,36],"mainly":[32],"shallow":[33],"models":[34,67],"limited":[37],"in":[38,59,74,99,119,166],"faithfully":[39],"modeling":[40,60,95,115],"complex,":[42],"diverse,":[43],"concurrent":[45],"spatial-temporal":[46],"brain":[48,144],"activities.":[49],"Recently,":[50],"recurrent":[51,111],"neural":[52],"networks":[53,145],"(RNNs)":[54],"demonstrated":[56],"great":[57],"superiority":[58,160],"temporal":[61],"dependency":[62],"signals,":[64],"while":[65],"autoencoder":[66,112,137],"proven":[70],"to":[71,130,138],"be":[72],"effective":[73],"automatically":[75,139,167],"estimating":[76,168],"optimal":[78],"representations":[79],"original":[82],"data.":[83,101],"These":[84],"characteristics":[85],"RNNs":[87],"autoencoders":[89],"naturally":[90],"meet":[91],"requirement":[93],"hemodynamic":[96,116,151,173],"response":[97,117,152,174],"patterns":[98,118,153],"tfMRI":[100],"Thus,":[102],"we":[103],"propose":[104],"novel":[106],"unsupervised":[107],"framework":[108],"deep":[110,133],"(DRAE)":[113],"for":[114],"this":[120],"article.":[121],"The":[122,155],"basic":[123],"idea":[124],"DRAE":[127,164],"is":[129],"combine":[131],"RNN":[134],"characterize":[140],"meaningful":[142],"corresponding":[147],"diverse":[148,170],"complex":[150,172],"simultaneously.":[154],"experimental":[156],"results":[157],"demonstrate":[158],"proposed":[163],"patterns.":[175]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
