{"id":"https://openalex.org/W2596199572","doi":"https://doi.org/10.1109/tcc.2017.2682860","title":"Securing Aggregate Queries for DNA Databases","display_name":"Securing Aggregate Queries for DNA Databases","publication_year":2017,"publication_date":"2017-03-16","ids":{"openalex":"https://openalex.org/W2596199572","doi":"https://doi.org/10.1109/tcc.2017.2682860","mag":"2596199572"},"language":"en","primary_location":{"id":"doi:10.1109/tcc.2017.2682860","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcc.2017.2682860","pdf_url":null,"source":{"id":"https://openalex.org/S2492498579","display_name":"IEEE Transactions on Cloud Computing","issn_l":"2168-7161","issn":["2168-7161","2372-0018"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Cloud Computing","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5043344581","display_name":"Mohamed Nassar","orcid":"https://orcid.org/0000-0001-8857-4436"},"institutions":[{"id":"https://openalex.org/I60342839","display_name":"Qatar University","ror":"https://ror.org/00yhnba62","country_code":"QA","type":"education","lineage":["https://openalex.org/I60342839"]}],"countries":["QA"],"is_corresponding":true,"raw_author_name":"Mohamed Nassar","raw_affiliation_strings":["Department of Computer Science and Engineering and KINDI Center for Computing Research, Qatar University, Doha, Qatar"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering and KINDI Center for Computing Research, Qatar University, Doha, Qatar","institution_ids":["https://openalex.org/I60342839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028226990","display_name":"Qutaibah Malluhi","orcid":"https://orcid.org/0000-0003-2849-0569"},"institutions":[{"id":"https://openalex.org/I60342839","display_name":"Qatar University","ror":"https://ror.org/00yhnba62","country_code":"QA","type":"education","lineage":["https://openalex.org/I60342839"]}],"countries":["QA"],"is_corresponding":false,"raw_author_name":"Qutaibah Malluhi","raw_affiliation_strings":["Department of Computer Science and Engineering and KINDI Center for Computing Research, Qatar University, Doha, Qatar"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering and KINDI Center for Computing Research, Qatar University, Doha, Qatar","institution_ids":["https://openalex.org/I60342839"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113562454","display_name":"Mikhail J. Atallah","orcid":null},"institutions":[{"id":"https://openalex.org/I219193219","display_name":"Purdue University West Lafayette","ror":"https://ror.org/02dqehb95","country_code":"US","type":"education","lineage":["https://openalex.org/I219193219"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mikhail Atallah","raw_affiliation_strings":["Department of Computer Science, Purdue University, West Lafayette, IN, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Purdue University, West Lafayette, IN, USA","institution_ids":["https://openalex.org/I219193219"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030199092","display_name":"Abdullatif Shikfa","orcid":"https://orcid.org/0000-0002-6479-3578"},"institutions":[{"id":"https://openalex.org/I60342839","display_name":"Qatar University","ror":"https://ror.org/00yhnba62","country_code":"QA","type":"education","lineage":["https://openalex.org/I60342839"]}],"countries":["QA"],"is_corresponding":false,"raw_author_name":"Abdullatif Shikfa","raw_affiliation_strings":["Department of Computer Science and Engineering and KINDI Center for Computing Research, Qatar University, Doha, Qatar"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering and KINDI Center for Computing Research, Qatar University, Doha, Qatar","institution_ids":["https://openalex.org/I60342839"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5043344581"],"corresponding_institution_ids":["https://openalex.org/I60342839"],"apc_list":null,"apc_paid":null,"fwci":0.4149,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.70384647,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"7","issue":"3","first_page":"827","last_page":"837"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10764","display_name":"Privacy-Preserving Technologies in Data","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12029","display_name":"DNA and Biological Computing","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7415698170661926},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6483985185623169},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6284065246582031},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.5362538695335388},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.508946418762207},{"id":"https://openalex.org/keywords/symbol","display_name":"Symbol (formal)","score":0.5072345733642578},{"id":"https://openalex.org/keywords/aggregate","display_name":"Aggregate (composite)","score":0.4804513156414032},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4375104010105133},{"id":"https://openalex.org/keywords/encoding","display_name":"Encoding (memory)","score":0.4363419711589813},{"id":"https://openalex.org/keywords/scheme","display_name":"Scheme (mathematics)","score":0.43025654554367065},{"id":"https://openalex.org/keywords/point","display_name":"Point (geometry)","score":0.4112457036972046},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3840078115463257},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3525562882423401},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3367695212364197},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1726282238960266},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11036428809165955},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09569990634918213}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7415698170661926},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6483985185623169},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6284065246582031},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.5362538695335388},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.508946418762207},{"id":"https://openalex.org/C134400042","wikidata":"https://www.wikidata.org/wiki/Q2372244","display_name":"Symbol (formal)","level":2,"score":0.5072345733642578},{"id":"https://openalex.org/C4679612","wikidata":"https://www.wikidata.org/wiki/Q866298","display_name":"Aggregate (composite)","level":2,"score":0.4804513156414032},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4375104010105133},{"id":"https://openalex.org/C125411270","wikidata":"https://www.wikidata.org/wiki/Q18653","display_name":"Encoding (memory)","level":2,"score":0.4363419711589813},{"id":"https://openalex.org/C77618280","wikidata":"https://www.wikidata.org/wiki/Q1155772","display_name":"Scheme (mathematics)","level":2,"score":0.43025654554367065},{"id":"https://openalex.org/C28719098","wikidata":"https://www.wikidata.org/wiki/Q44946","display_name":"Point (geometry)","level":2,"score":0.4112457036972046},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3840078115463257},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3525562882423401},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3367695212364197},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1726282238960266},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11036428809165955},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09569990634918213},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1109/tcc.2017.2682860","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcc.2017.2682860","pdf_url":null,"source":{"id":"https://openalex.org/S2492498579","display_name":"IEEE Transactions on Cloud Computing","issn_l":"2168-7161","issn":["2168-7161","2372-0018"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Cloud Computing","raw_type":"journal-article"},{"id":"pmh:oai:digitalcommons.newhaven.edu:electricalcomputerengineering-facpubs-1121","is_oa":false,"landing_page_url":"https://digitalcommons.newhaven.edu/electricalcomputerengineering-facpubs/120","pdf_url":null,"source":{"id":"https://openalex.org/S4377196522","display_name":"Digital Commons - New Heaven (University of New Haven)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I40253897","host_organization_name":"University of New Haven","host_organization_lineage":["https://openalex.org/I40253897"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Electrical & Computer Engineering and Computer Science Faculty Publications","raw_type":"text"},{"id":"pmh:oai:qspace.qu.edu.qa:10576/56756","is_oa":false,"landing_page_url":"http://doi.org/10.1109/TCC.2017.2682860","pdf_url":null,"source":{"id":"https://openalex.org/S4306400014","display_name":"Qatar University QSpace (Qatar University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I60342839","host_organization_name":"Qatar University","host_organization_lineage":["https://openalex.org/I60342839"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3454179076","display_name":null,"funder_award_id":"CNS-0915436","funder_id":"https://openalex.org/F4320335353","funder_display_name":"National Science Foundation of Sri Lanka"},{"id":"https://openalex.org/G3827569145","display_name":null,"funder_award_id":"NPRP 09-622-1-090","funder_id":"https://openalex.org/F4320332753","funder_display_name":"Qatar National Research Fund"},{"id":"https://openalex.org/G389547095","display_name":null,"funder_award_id":"CPS-1329979","funder_id":"https://openalex.org/F4320335353","funder_display_name":"National Science Foundation of Sri Lanka"},{"id":"https://openalex.org/G739498812","display_name":null,"funder_award_id":"NPRP X-063-1-014","funder_id":"https://openalex.org/F4320332753","funder_display_name":"Qatar National Research Fund"}],"funders":[{"id":"https://openalex.org/F4320332753","display_name":"Qatar National Research Fund","ror":"https://ror.org/01svaqq28"},{"id":"https://openalex.org/F4320335353","display_name":"National Science Foundation of Sri Lanka","ror":"https://ror.org/010xaa060"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":34,"referenced_works":["https://openalex.org/W289398240","https://openalex.org/W309548903","https://openalex.org/W346929228","https://openalex.org/W1479918017","https://openalex.org/W1517725369","https://openalex.org/W1525125301","https://openalex.org/W1534388293","https://openalex.org/W1565207014","https://openalex.org/W1601001795","https://openalex.org/W1660562555","https://openalex.org/W1729744401","https://openalex.org/W1996360405","https://openalex.org/W2005991258","https://openalex.org/W2010709473","https://openalex.org/W2026609425","https://openalex.org/W2028201288","https://openalex.org/W2068143382","https://openalex.org/W2085801087","https://openalex.org/W2108834246","https://openalex.org/W2124398102","https://openalex.org/W2125556232","https://openalex.org/W2127458553","https://openalex.org/W2131772137","https://openalex.org/W2132172731","https://openalex.org/W2136894147","https://openalex.org/W2153474708","https://openalex.org/W2165067028","https://openalex.org/W4210300416","https://openalex.org/W4232836212","https://openalex.org/W4236468174","https://openalex.org/W6610795358","https://openalex.org/W6611554128","https://openalex.org/W6678707656","https://openalex.org/W6680347758"],"related_works":["https://openalex.org/W2389793738","https://openalex.org/W2376208682","https://openalex.org/W2924107927","https://openalex.org/W2368886944","https://openalex.org/W4390358280","https://openalex.org/W2611966483","https://openalex.org/W4240806619","https://openalex.org/W4254609622","https://openalex.org/W2392641092","https://openalex.org/W4246219814"],"abstract_inverted_index":{"This":[0,95],"paper":[1],"addresses":[2],"the":[3,12,29,39,75,92,100,118,136,142,147,152,173,201,217,223,230,240,261,274,289,301,304,310,313,319,324,335,341,344],"problem":[4],"of":[5,14,44,57,117,130,141,149,172,204,222,232,234,237,276,288,343],"sharing":[6],"person-specific":[7],"genomic":[8],"sequences":[9,213],"without":[10],"violating":[11],"privacy":[13],"their":[15],"data":[16,119],"subjects":[17],"to":[18,63,125,168,179,340],"support":[19,199],"large-scale":[20],"biomedical":[21],"research":[22],"projects.":[23],"The":[24],"proposed":[25,31],"method":[26],"builds":[27],"on":[28,216],"framework":[30],"by":[32,78,99],"Kantarcioglu":[33],"et":[34],"al.":[35],"[1]":[36],"but":[37,89],"extends":[38],"results":[40],"in":[41,74,108,211,239,257,260],"a":[42,58,64,70,80,127,156,163,170,182,185,191,196,266,279],"number":[43,148,231,275],"ways.":[45],"One":[46],"improvement":[47],"is":[48,52,83,97,104,166,271],"that":[49,82,102,208,228,308],"our":[50,115],"scheme":[51,81],"deterministic,":[53],"with":[54],"zero":[55],"probability":[56],"wrong":[59],"answer":[60,270],"(as":[61,181],"opposed":[62],"low":[65],"probability).":[66],"We":[67],"also":[68],"provide":[69],"new":[71],"operating":[72],"point":[73,96],"space-time":[76],"tradeoff,":[77],"offering":[79],"twice":[84,91],"as":[85,87],"fast":[86],"theirs":[88],"uses":[90],"storage":[93,103],"space.":[94],"motivated":[98],"fact":[101],"cheaper":[105],"than":[106,132],"computation":[107],"current":[109],"cloud":[110],"computing":[111],"pricing":[112],"plans.":[113],"Moreover,":[114],"encoding":[116],"makes":[120],"it":[121,177],"possible":[122,178],"for":[123,190,200,328],"us":[124],"handle":[126,180],"richer":[128],"set":[129],"queries":[131,227],"exact":[133],"matching":[134],"between":[135,151],"query":[137,153,164,192,224,268,296,329],"and":[138,155,247,250,253],"each":[139,235],"sequence":[140,219,242,263],"database,":[143],"including:":[144],"(i)":[145],"counting":[146],"matches":[150,161,277,286],"symbols":[154],"sequence;":[157],"(ii)":[158],"logical":[159],"OR":[160],"where":[162,332],"symbol":[165,193,238],"allowed":[167],"match":[169],"subset":[171],"alphabet":[174,203],"thereby":[175],"making":[176],"special":[183],"case)":[184],"\u201cnot":[186,195],"equal":[187],"to\u201d":[188],"requirement":[189],"(e.g.,":[194,244,282],"G\u201d);":[197],"(iii)":[198],"extended":[202],"nucleotide":[205],"base":[206],"codes":[207],"encompasses":[209],"ambiguities":[210],"DNA":[212,218],"(this":[214],"happens":[215],"side":[220],"instead":[221],"side);":[225],"(iv)":[226],"specify":[229],"occurrences":[233],"kind":[236],"specified":[241],"positions":[243],"two":[245],"`A'":[246],"four":[248],"`C'":[249],"one":[251],"`G'":[252],"three":[254],"`T',":[255],"occurring":[256],"any":[258],"order":[259],"query-specified":[262,280,291],"positions);":[264],"(v)":[265,331],"threshold":[267,281],"whose":[269],"`yes'":[272],"if":[273],"exceeds":[278],"\u201c7":[283],"or":[284],"more":[285],"out":[287],"15":[290],"positions\u201d).":[292],"(vi)":[293],"For":[294],"all":[295,317],"types,":[297],"we":[298,333],"can":[299],"hide":[300],"answers":[302],"from":[303],"decrypting":[305],"server,":[306],"so":[307],"only":[309,323],"client":[311,320,342],"learns":[312,322],"answer.":[314],"(vii)":[315],"In":[316],"cases,":[318],"deterministically":[321],"query's":[325],"answer,":[326],"except":[327],"type":[330],"quantify":[334],"(very":[336],"small)":[337],"statistical":[338],"leakage":[339],"actual":[345],"count.":[346]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
