{"id":"https://openalex.org/W4414871627","doi":"https://doi.org/10.1109/tcbbio.2025.3617480","title":"Accurate Tracking of Arabidopsis Root Cortex Cell Nuclei in 3D Time-Lapse Microscopy Images Based on Genetic Algorithm","display_name":"Accurate Tracking of Arabidopsis Root Cortex Cell Nuclei in 3D Time-Lapse Microscopy Images Based on Genetic Algorithm","publication_year":2025,"publication_date":"2025-10-06","ids":{"openalex":"https://openalex.org/W4414871627","doi":"https://doi.org/10.1109/tcbbio.2025.3617480","pmid":"https://pubmed.ncbi.nlm.nih.gov/41052158"},"language":"en","primary_location":{"id":"doi:10.1109/tcbbio.2025.3617480","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbbio.2025.3617480","pdf_url":null,"source":{"id":"https://openalex.org/S5407042751","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"2998-4165","issn":["2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2504.12676","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012949567","display_name":"Yu Song","orcid":"https://orcid.org/0000-0002-4660-5430"},"institutions":[{"id":"https://openalex.org/I135768898","display_name":"Ritsumeikan University","ror":"https://ror.org/0197nmd03","country_code":"JP","type":"education","lineage":["https://openalex.org/I135768898","https://openalex.org/I4390039241"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Yu Song","raw_affiliation_strings":["College of Information Scinece and Engineering, Ritsumeikan University, Osaka, Japan","College of Information Science and Engineering, Ritsumeikan University, Osaka, Japan"],"affiliations":[{"raw_affiliation_string":"College of Information Scinece and Engineering, Ritsumeikan University, Osaka, Japan","institution_ids":["https://openalex.org/I135768898"]},{"raw_affiliation_string":"College of Information Science and Engineering, Ritsumeikan University, Osaka, Japan","institution_ids":["https://openalex.org/I135768898"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060614817","display_name":"Tatsuaki Goh","orcid":"https://orcid.org/0000-0002-1064-5801"},"institutions":[{"id":"https://openalex.org/I75917431","display_name":"Nara Institute of Science and Technology","ror":"https://ror.org/05bhada84","country_code":"JP","type":"education","lineage":["https://openalex.org/I75917431"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Tatsuaki Goh","raw_affiliation_strings":["Graduate School of Science and Technology, Nara Institute of Science and Technology, Nara, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Science and Technology, Nara Institute of Science and Technology, Nara, Japan","institution_ids":["https://openalex.org/I75917431"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010150695","display_name":"Yinhao Li","orcid":"https://orcid.org/0000-0002-8924-5279"},"institutions":[{"id":"https://openalex.org/I135768898","display_name":"Ritsumeikan University","ror":"https://ror.org/0197nmd03","country_code":"JP","type":"education","lineage":["https://openalex.org/I135768898","https://openalex.org/I4390039241"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yinhao Li","raw_affiliation_strings":["College of Information Scinece and Engineering, Ritsumeikan University, Osaka, Japan","College of Information Science and Engineering, Ritsumeikan University, Osaka, Japan"],"affiliations":[{"raw_affiliation_string":"College of Information Scinece and Engineering, Ritsumeikan University, Osaka, Japan","institution_ids":["https://openalex.org/I135768898"]},{"raw_affiliation_string":"College of Information Science and Engineering, Ritsumeikan University, Osaka, Japan","institution_ids":["https://openalex.org/I135768898"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014443478","display_name":"Jiahua Dong","orcid":"https://orcid.org/0000-0001-8545-4447"},"institutions":[{"id":"https://openalex.org/I168879160","display_name":"Zhejiang University of Science and Technology","ror":"https://ror.org/05mx0wr29","country_code":"CN","type":"education","lineage":["https://openalex.org/I168879160"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiahua Dong","raw_affiliation_strings":["College of Computer Science and Technology, Zhejiang University, Zhejiang, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Zhejiang University, Zhejiang, China","institution_ids":["https://openalex.org/I168879160"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002332860","display_name":"Shunsuke Miyashima","orcid":"https://orcid.org/0000-0001-8267-3978"},"institutions":[{"id":"https://openalex.org/I200684654","display_name":"Ishikawa Prefectural University","ror":"https://ror.org/00b45dj41","country_code":"JP","type":"education","lineage":["https://openalex.org/I200684654"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Shunsuke Miyashima","raw_affiliation_strings":["Bioresource Engineering Laboratory, Ishikawa Prefectural University, Ishiwaka, Japan"],"affiliations":[{"raw_affiliation_string":"Bioresource Engineering Laboratory, Ishikawa Prefectural University, Ishiwaka, Japan","institution_ids":["https://openalex.org/I200684654"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010434486","display_name":"Yutaro Iwamoto","orcid":"https://orcid.org/0000-0001-6723-8652"},"institutions":[{"id":"https://openalex.org/I189513530","display_name":"Osaka Electro-Communication University","ror":"https://ror.org/056bksm23","country_code":"JP","type":"education","lineage":["https://openalex.org/I189513530"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yutaro Iwamoto","raw_affiliation_strings":["Department of Engineering Informatics, Osaka Electro-Communication University, Osaka, Japan"],"affiliations":[{"raw_affiliation_string":"Department of Engineering Informatics, Osaka Electro-Communication University, Osaka, Japan","institution_ids":["https://openalex.org/I189513530"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060932812","display_name":"Yohei Kondo","orcid":"https://orcid.org/0000-0002-2801-4522"},"institutions":[{"id":"https://openalex.org/I199525922","display_name":"National Institutes of Natural Sciences","ror":"https://ror.org/055n47h92","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I199525922"]},{"id":"https://openalex.org/I60134161","display_name":"Nagoya University","ror":"https://ror.org/04chrp450","country_code":"JP","type":"education","lineage":["https://openalex.org/I60134161"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yohei Kondo","raw_affiliation_strings":["One Medicine Transdisciplinary Life Science-Medicine Co-Creation Platform Designated Lecturer, Nagoya University, Aichi, Japan","Exploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Aichi, Japan"],"affiliations":[{"raw_affiliation_string":"One Medicine Transdisciplinary Life Science-Medicine Co-Creation Platform Designated Lecturer, Nagoya University, Aichi, Japan","institution_ids":["https://openalex.org/I60134161"]},{"raw_affiliation_string":"Exploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Aichi, Japan","institution_ids":["https://openalex.org/I199525922"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047382885","display_name":"Keiji Nakajima","orcid":"https://orcid.org/0000-0002-1580-3354"},"institutions":[{"id":"https://openalex.org/I75917431","display_name":"Nara Institute of Science and Technology","ror":"https://ror.org/05bhada84","country_code":"JP","type":"education","lineage":["https://openalex.org/I75917431"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Keiji Nakajima","raw_affiliation_strings":["Graduate School of Science and Technology, Nara Institute of Science and Technology, Nara, Japan"],"affiliations":[{"raw_affiliation_string":"Graduate School of Science and Technology, Nara Institute of Science and Technology, Nara, Japan","institution_ids":["https://openalex.org/I75917431"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044216245","display_name":"Yen\u2010Wei Chen","orcid":"https://orcid.org/0000-0002-5952-0188"},"institutions":[{"id":"https://openalex.org/I135768898","display_name":"Ritsumeikan University","ror":"https://ror.org/0197nmd03","country_code":"JP","type":"education","lineage":["https://openalex.org/I135768898","https://openalex.org/I4390039241"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Yen-wei Chen","raw_affiliation_strings":["College of Information Scinece and Engineering, Ritsumeikan University, Osaka, Japan","College of Information Science and Engineering, Ritsumeikan University, Osaka, Japan"],"affiliations":[{"raw_affiliation_string":"College of Information Scinece and Engineering, Ritsumeikan University, Osaka, Japan","institution_ids":["https://openalex.org/I135768898"]},{"raw_affiliation_string":"College of Information Science and Engineering, Ritsumeikan University, Osaka, Japan","institution_ids":["https://openalex.org/I135768898"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5012949567"],"corresponding_institution_ids":["https://openalex.org/I135768898"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.19470868,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"22","issue":"6","first_page":"3260","last_page":"3272"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.6793000102043152,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.6793000102043152,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.6046000123023987,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/arabidopsis","display_name":"Arabidopsis","score":0.8629999756813049},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.7268000245094299},{"id":"https://openalex.org/keywords/meristem","display_name":"Meristem","score":0.5949000120162964},{"id":"https://openalex.org/keywords/root","display_name":"Root (linguistics)","score":0.5942000150680542},{"id":"https://openalex.org/keywords/blob-detection","display_name":"Blob detection","score":0.4205999970436096},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.40790000557899475},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.39800000190734863}],"concepts":[{"id":"https://openalex.org/C2779491563","wikidata":"https://www.wikidata.org/wiki/Q157892","display_name":"Arabidopsis","level":4,"score":0.8629999756813049},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.7268000245094299},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6270999908447266},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6050000190734863},{"id":"https://openalex.org/C126021549","wikidata":"https://www.wikidata.org/wiki/Q207604","display_name":"Meristem","level":3,"score":0.5949000120162964},{"id":"https://openalex.org/C171078966","wikidata":"https://www.wikidata.org/wiki/Q111029","display_name":"Root (linguistics)","level":2,"score":0.5942000150680542},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5113999843597412},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.4296000003814697},{"id":"https://openalex.org/C29168087","wikidata":"https://www.wikidata.org/wiki/Q1026711","display_name":"Blob detection","level":5,"score":0.4205999970436096},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.40790000557899475},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.39800000190734863},{"id":"https://openalex.org/C163716315","wikidata":"https://www.wikidata.org/wiki/Q901177","display_name":"Gaussian","level":2,"score":0.3499000072479248},{"id":"https://openalex.org/C8880873","wikidata":"https://www.wikidata.org/wiki/Q187787","display_name":"Genetic algorithm","level":2,"score":0.3249000012874603},{"id":"https://openalex.org/C2775988993","wikidata":"https://www.wikidata.org/wiki/Q158695","display_name":"Arabidopsis thaliana","level":4,"score":0.3003000020980835},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2879999876022339},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.26840001344680786},{"id":"https://openalex.org/C2780586882","wikidata":"https://www.wikidata.org/wiki/Q7520643","display_name":"Simple (philosophy)","level":2,"score":0.26420000195503235},{"id":"https://openalex.org/C7218915","wikidata":"https://www.wikidata.org/wiki/Q1054475","display_name":"Gaussian function","level":3,"score":0.2554999887943268},{"id":"https://openalex.org/C2776502983","wikidata":"https://www.wikidata.org/wiki/Q690182","display_name":"Contrast (vision)","level":2,"score":0.2551000118255615},{"id":"https://openalex.org/C207177822","wikidata":"https://www.wikidata.org/wiki/Q5050812","display_name":"Genetic screen","level":4,"score":0.2508000135421753}],"mesh":[{"descriptor_ui":"D000098434","descriptor_name":"Genetic Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098434","descriptor_name":"Genetic Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098434","descriptor_name":"Genetic Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D002467","descriptor_name":"Cell Nucleus","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":true},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D017360","descriptor_name":"Arabidopsis","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D018517","descriptor_name":"Plant Roots","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D021621","descriptor_name":"Imaging, Three-Dimensional","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059008","descriptor_name":"Time-Lapse Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059008","descriptor_name":"Time-Lapse Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D059008","descriptor_name":"Time-Lapse Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1109/tcbbio.2025.3617480","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbbio.2025.3617480","pdf_url":null,"source":{"id":"https://openalex.org/S5407042751","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"2998-4165","issn":["2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41052158","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41052158","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on computational biology and bioinformatics","raw_type":null},{"id":"pmh:oai:arXiv.org:2504.12676","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2504.12676","pdf_url":"https://arxiv.org/pdf/2504.12676","source":{"id":"https://openalex.org/S4393918464","display_name":"ArXiv.org","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2504.12676","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2504.12676","pdf_url":"https://arxiv.org/pdf/2504.12676","source":{"id":"https://openalex.org/S4393918464","display_name":"ArXiv.org","issn_l":"2331-8422","issn":["2331-8422"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G12401395","display_name":null,"funder_award_id":"Technology","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"},{"id":"https://openalex.org/G1494321272","display_name":null,"funder_award_id":"SPRING","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"},{"id":"https://openalex.org/G4611969921","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"},{"id":"https://openalex.org/G4664133093","display_name":null,"funder_award_id":"PREST","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"},{"id":"https://openalex.org/G4710154313","display_name":null,"funder_award_id":"19H05671","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"},{"id":"https://openalex.org/G4864544293","display_name":null,"funder_award_id":"Japan","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"},{"id":"https://openalex.org/G509276038","display_name":null,"funder_award_id":"19H05670","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"},{"id":"https://openalex.org/G5222845047","display_name":null,"funder_award_id":"20H05428","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"},{"id":"https://openalex.org/G5518604981","display_name":null,"funder_award_id":"PREST","funder_id":"https://openalex.org/F4320338111","funder_display_name":"Precursory Research for Embryonic Science and Technology"},{"id":"https://openalex.org/G6267471473","display_name":null,"funder_award_id":"Grant-in-Aid","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"},{"id":"https://openalex.org/G6913231592","display_name":null,"funder_award_id":"19H05670","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"},{"id":"https://openalex.org/G7148736649","display_name":null,"funder_award_id":"PRESTO","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"},{"id":"https://openalex.org/G7485138276","display_name":null,"funder_award_id":"Technology","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"},{"id":"https://openalex.org/G7513156145","display_name":null,"funder_award_id":"JPMJSP2101","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"},{"id":"https://openalex.org/G7599130655","display_name":null,"funder_award_id":"Grant","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"},{"id":"https://openalex.org/G7928713509","display_name":null,"funder_award_id":"JPMJSP210","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"},{"id":"https://openalex.org/G8044579487","display_name":null,"funder_award_id":"Japan","funder_id":"https://openalex.org/F4320320912","funder_display_name":"Ministry of Education, Culture, Sports, Science and Technology"},{"id":"https://openalex.org/G8510682647","display_name":null,"funder_award_id":"SPRING JPMJSP2101","funder_id":"https://openalex.org/F4320334789","funder_display_name":"Japan Science and Technology Agency"}],"funders":[{"id":"https://openalex.org/F4320320912","display_name":"Ministry of Education, Culture, Sports, Science and Technology","ror":"https://ror.org/048rj2z13"},{"id":"https://openalex.org/F4320334789","display_name":"Japan Science and Technology Agency","ror":"https://ror.org/00097mb19"},{"id":"https://openalex.org/F4320338111","display_name":"Precursory Research for Embryonic Science and Technology","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4414871627.pdf","grobid_xml":"https://content.openalex.org/works/W4414871627.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W639708223","https://openalex.org/W1901129140","https://openalex.org/W1969297367","https://openalex.org/W1970072462","https://openalex.org/W2000359198","https://openalex.org/W2016533177","https://openalex.org/W2047094503","https://openalex.org/W2088234031","https://openalex.org/W2089118630","https://openalex.org/W2094710069","https://openalex.org/W2098916810","https://openalex.org/W2099540110","https://openalex.org/W2105916176","https://openalex.org/W2109200236","https://openalex.org/W2135438092","https://openalex.org/W2141461755","https://openalex.org/W2149242848","https://openalex.org/W2149536871","https://openalex.org/W2156169124","https://openalex.org/W2162819370","https://openalex.org/W2241188712","https://openalex.org/W2252355370","https://openalex.org/W2601812001","https://openalex.org/W2624634101","https://openalex.org/W2804709332","https://openalex.org/W2895071559","https://openalex.org/W2920942303","https://openalex.org/W2950567898","https://openalex.org/W2962855257","https://openalex.org/W2963063317","https://openalex.org/W2967622921","https://openalex.org/W2986732333","https://openalex.org/W3034233786","https://openalex.org/W3084173793","https://openalex.org/W3096609285","https://openalex.org/W3119686997","https://openalex.org/W4225589975","https://openalex.org/W4282829178","https://openalex.org/W4387798788","https://openalex.org/W4403990550"],"related_works":[],"abstract_inverted_index":{"Arabidopsis":[0,90,138,182],"is":[1,14,33],"a":[2,41,53,82,102,165],"widely":[3],"used":[4,37],"model":[5],"plant":[6,24],"to":[7,18,163],"study":[8],"physiology":[9],"and":[10,20,26,52,94,124,141],"development.":[11],"Live":[12],"imaging":[13,135],"an":[15,76,177],"important":[16],"technique":[17],"visualize":[19],"quantify":[21],"processes":[22],"in":[23,168],"growth":[25],"cell":[27,31,122],"division,":[28],"where":[29],"accurate":[30,77,148,178],"tracking":[32,78,110,179],"essential.":[34],"The":[35],"commonly":[36],"software":[38],"TrackMate":[39],"adopts":[40],"tracking-by-detection":[42],"approach,":[43],"applying":[44],"Laplacian":[45],"of":[46,89,111,121,137,154,171],"Gaussian":[47],"(LoG)":[48],"for":[49,59,181],"blob":[50],"detection":[51],"Linear":[54],"Assignment":[55],"Problem":[56],"(LAP)":[57],"tracker":[58],"tracking.":[60,150],"However,":[61],"its":[62],"performance":[63],"declines":[64],"when":[65],"cells":[66],"are":[67],"densely":[68],"arranged.":[69],"To":[70,151],"overcome":[71],"this":[72,157],"limitation,":[73],"we":[74],"propose":[75],"method":[79,100,131,180],"based":[80,116],"on":[81,117,132],"Genetic":[83],"Algorithm":[84],"(GA)":[85],"that":[86],"incorporates":[87],"knowledge":[88],"root":[91,139,173,183],"cellular":[92],"patterns":[93],"spatial":[95,126],"relationships":[96],"among":[97],"volumes.":[98],"Our":[99],"follows":[101],"coarse-to-fine":[103],"strategy:":[104],"first":[105,160],"performing":[106],"relatively":[107],"simple":[108],"line-level":[109],"nuclei,":[112],"then":[113],"refining":[114],"associations":[115],"the":[118,130,152,159,172],"linear":[119],"arrangement":[120],"files":[123],"their":[125],"relationships.":[127],"We":[128],"evaluated":[129],"long-term":[133],"live":[134],"datasets":[136],"tips,":[140],"with":[142],"minor":[143],"manual":[144],"correction,":[145],"it":[146],"achieved":[147],"nuclear":[149],"best":[153],"our":[155],"knowledge,":[156],"represents":[158],"successful":[161],"attempt":[162],"address":[164],"long-standing":[166],"problem":[167],"time-lapse":[169],"microscopy":[170],"meristem":[174],"by":[175],"providing":[176],"nuclei.":[184]},"counts_by_year":[],"updated_date":"2026-04-14T08:04:32.555800","created_date":"2025-10-10T00:00:00"}
