{"id":"https://openalex.org/W4387448108","doi":"https://doi.org/10.1109/tcbb.2023.3322697","title":"Anonymous Pattern Molecular Fingerprint and its Applications on Property Identification","display_name":"Anonymous Pattern Molecular Fingerprint and its Applications on Property Identification","publication_year":2023,"publication_date":"2023-10-09","ids":{"openalex":"https://openalex.org/W4387448108","doi":"https://doi.org/10.1109/tcbb.2023.3322697","pmid":"https://pubmed.ncbi.nlm.nih.gov/37812549"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2023.3322697","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2023.3322697","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101501086","display_name":"Xue Liu","orcid":"https://orcid.org/0000-0002-7854-7845"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xue Liu","raw_affiliation_strings":["Institute of Artificial Intelligence, Beihang University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Institute of Artificial Intelligence, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102018228","display_name":"Qian Cheng","orcid":"https://orcid.org/0000-0002-0595-9013"},"institutions":[{"id":"https://openalex.org/I1327237609","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934","country_code":"CN","type":"government","lineage":["https://openalex.org/I1327237609","https://openalex.org/I4210127390"]},{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qian Cheng","raw_affiliation_strings":["School of Mathematical Sciences, Beihang University, Beijing, China","Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Ministry of Education, China"],"affiliations":[{"raw_affiliation_string":"School of Mathematical Sciences, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]},{"raw_affiliation_string":"Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Ministry of Education, China","institution_ids":["https://openalex.org/I1327237609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101874275","display_name":"Dan Sun","orcid":"https://orcid.org/0009-0008-7369-7220"},"institutions":[{"id":"https://openalex.org/I1327237609","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934","country_code":"CN","type":"government","lineage":["https://openalex.org/I1327237609","https://openalex.org/I4210127390"]},{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dan Sun","raw_affiliation_strings":["School of Mathematical Sciences, Beihang University, Beijing, China","Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Ministry of Education, China"],"affiliations":[{"raw_affiliation_string":"School of Mathematical Sciences, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]},{"raw_affiliation_string":"Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Ministry of Education, China","institution_ids":["https://openalex.org/I1327237609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100323831","display_name":"Wei Wei","orcid":"https://orcid.org/0000-0003-3747-9484"},"institutions":[{"id":"https://openalex.org/I1327237609","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934","country_code":"CN","type":"government","lineage":["https://openalex.org/I1327237609","https://openalex.org/I4210127390"]},{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wei Wei","raw_affiliation_strings":["School of Mathematical Sciences, Beihang University, Beijing, China","Zhongguancun Laboratory, Beijing, China","Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Ministry of Education, China","Institute of Artificial Intelligence, Beihang University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Mathematical Sciences, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]},{"raw_affiliation_string":"Zhongguancun Laboratory, Beijing, China","institution_ids":[]},{"raw_affiliation_string":"Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Ministry of Education, China","institution_ids":["https://openalex.org/I1327237609"]},{"raw_affiliation_string":"Institute of Artificial Intelligence, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100534354","display_name":"Zheng Zhiming","orcid":null},"institutions":[{"id":"https://openalex.org/I1327237609","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934","country_code":"CN","type":"government","lineage":["https://openalex.org/I1327237609","https://openalex.org/I4210127390"]},{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiming Zheng","raw_affiliation_strings":["Institute of Artificial Intelligence, Beihang University, Beijing, China","Zhongguancun Laboratory, Beijing, China","Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Ministry of Education, China"],"affiliations":[{"raw_affiliation_string":"Institute of Artificial Intelligence, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]},{"raw_affiliation_string":"Zhongguancun Laboratory, Beijing, China","institution_ids":[]},{"raw_affiliation_string":"Key Laboratory of Mathematics, Informatics and Behavioral Semantics, Ministry of Education, China","institution_ids":["https://openalex.org/I1327237609"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101501086"],"corresponding_institution_ids":["https://openalex.org/I82880672"],"apc_list":null,"apc_paid":null,"fwci":0.5891,"has_fulltext":false,"cited_by_count":3,"citation_normalized_percentile":{"value":0.71981414,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"20","issue":"6","first_page":"3759","last_page":"3771"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13297","display_name":"History and advancements in chemistry","score":0.9861000180244446,"subfield":{"id":"https://openalex.org/subfields/1606","display_name":"Physical and Theoretical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/fingerprint","display_name":"Fingerprint (computing)","score":0.6834186315536499},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6688863635063171},{"id":"https://openalex.org/keywords/property","display_name":"Property (philosophy)","score":0.6111313104629517},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4478248357772827},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.32868659496307373},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.29760390520095825},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.136661559343338},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.09443056583404541},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.0641939640045166}],"concepts":[{"id":"https://openalex.org/C2777826928","wikidata":"https://www.wikidata.org/wiki/Q3745713","display_name":"Fingerprint (computing)","level":2,"score":0.6834186315536499},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6688863635063171},{"id":"https://openalex.org/C189950617","wikidata":"https://www.wikidata.org/wiki/Q937228","display_name":"Property (philosophy)","level":2,"score":0.6111313104629517},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4478248357772827},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32868659496307373},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.29760390520095825},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.136661559343338},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.09443056583404541},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0641939640045166},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000080911","descriptor_name":"Cheminformatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000080911","descriptor_name":"Cheminformatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000080911","descriptor_name":"Cheminformatics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D062126","descriptor_name":"Databases, Chemical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2023.3322697","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2023.3322697","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37812549","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37812549","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/4","score":0.6700000166893005,"display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G199691692","display_name":null,"funder_award_id":"62276013","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G437053041","display_name":null,"funder_award_id":"62050132","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6217815188","display_name":null,"funder_award_id":"1192012","funder_id":"https://openalex.org/F4320322919","funder_display_name":"Natural Science Foundation of Beijing Municipality"},{"id":"https://openalex.org/G8351431548","display_name":null,"funder_award_id":"62141605","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322919","display_name":"Natural Science Foundation of Beijing Municipality","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":51,"referenced_works":["https://openalex.org/W1028735754","https://openalex.org/W1816257748","https://openalex.org/W1983478747","https://openalex.org/W1988037271","https://openalex.org/W2004902747","https://openalex.org/W2008381136","https://openalex.org/W2025167103","https://openalex.org/W2028649050","https://openalex.org/W2041946761","https://openalex.org/W2042035902","https://openalex.org/W2056562706","https://openalex.org/W2061344791","https://openalex.org/W2065311854","https://openalex.org/W2081050523","https://openalex.org/W2086729168","https://openalex.org/W2089589794","https://openalex.org/W2092750499","https://openalex.org/W2099438806","https://openalex.org/W2138072853","https://openalex.org/W2169678694","https://openalex.org/W2177317049","https://openalex.org/W2269544137","https://openalex.org/W2558461359","https://openalex.org/W2594183968","https://openalex.org/W2809343047","https://openalex.org/W2921539374","https://openalex.org/W2937274663","https://openalex.org/W2946801348","https://openalex.org/W2962949934","https://openalex.org/W2964638303","https://openalex.org/W2966357564","https://openalex.org/W2972627426","https://openalex.org/W3017228204","https://openalex.org/W3025733956","https://openalex.org/W3035302862","https://openalex.org/W3093996209","https://openalex.org/W3161797715","https://openalex.org/W3172010853","https://openalex.org/W4295992366","https://openalex.org/W4307493889","https://openalex.org/W6681029592","https://openalex.org/W6686339351","https://openalex.org/W6713582119","https://openalex.org/W6726873649","https://openalex.org/W6738964360","https://openalex.org/W6741450815","https://openalex.org/W6751555526","https://openalex.org/W6758327135","https://openalex.org/W6766156693","https://openalex.org/W6802320626","https://openalex.org/W7065437122"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2350741829","https://openalex.org/W2530322880","https://openalex.org/W1596801655","https://openalex.org/W2359140296"],"abstract_inverted_index":{"Molecular":[0],"fingerprints":[1],"are":[2,61],"significant":[3,149],"cheminformatics":[4],"tools":[5],"to":[6,13,150,177],"map":[7],"molecules":[8],"into":[9,82],"vectorial":[10,83],"space":[11,84],"according":[12],"their":[14],"characteristics":[15],"in":[16,45,85],"diverse":[17],"functional":[18],"groups,":[19],"atom":[20,50,56,67,141],"sequences,":[21],"and":[22,48,63,111,129,170],"other":[23],"topological":[24],"structures.":[25],"In":[26,52],"this":[27],"paper,":[28],"we":[29],"investigate":[30],"a":[31,106],"novel":[32],"molecular":[33,77,98],"fingerprint":[34,78],"Anonymous-FP":[35,79,94,172],"that":[36],"possesses":[37],"abundant":[38],"perception":[39],"about":[40],"the":[41,54,76,88,134,137,140,151,158,166,174],"underlying":[42],"interactions":[43],"shaped":[44],"small,":[46],"medium,":[47],"large-scale":[49],"chains.":[51],"detail,":[53],"possible":[55],"chains":[57,68],"from":[58],"each":[59],"molecule":[60,102,109,167],"sampled":[62],"extended":[64],"as":[65,117],"anonymous":[66,71,145],"using":[69],"an":[70],"encoding":[72],"manner.":[73],"After":[74],"that,":[75],"is":[80,95,147],"embedded":[81],"virtue":[86],"of":[87,108,139,155],"Natural":[89],"Language":[90],"Processing":[91],"technique":[92],"PV-DBOW.":[93],"studied":[96],"on":[97,105,120,180],"property":[99],"identification":[100],"via":[101],"classification":[103,168,175],"experiments":[104],"series":[107],"databases":[110],"has":[112],"shown":[113],"valuable":[114],"advantages":[115],"such":[116],"less":[118],"dependence":[119],"prior":[121],"knowledge,":[122],"rich":[123],"information":[124],"content,":[125],"full":[126],"structural":[127],"significance,":[128],"high":[130],"experimental":[131,135],"performance.":[132],"During":[133],"verification,":[136],"scale":[138,160],"chain":[142],"or":[143],"its":[144],"pattern":[146],"found":[148],"overall":[152],"representation":[153],"ability":[154],"Anonymous-FP.":[156],"Generally,":[157],"typical":[159],"r":[161],"=":[162],"8":[163],"could":[164],"enhance":[165],"performance,":[169],"specifically,":[171],"gains":[173],"accuracy":[176],"above":[178],"93%":[179],"all":[181],"NCI":[182],"datasets.":[183]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1}],"updated_date":"2026-04-11T08:14:18.477133","created_date":"2025-10-10T00:00:00"}
