{"id":"https://openalex.org/W4309094758","doi":"https://doi.org/10.1109/tcbb.2022.3221736","title":"MAGCN: A Multiple Attention Graph Convolution Networks for Predicting Synthetic Lethality","display_name":"MAGCN: A Multiple Attention Graph Convolution Networks for Predicting Synthetic Lethality","publication_year":2022,"publication_date":"2022-11-14","ids":{"openalex":"https://openalex.org/W4309094758","doi":"https://doi.org/10.1109/tcbb.2022.3221736","pmid":"https://pubmed.ncbi.nlm.nih.gov/36374879"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2022.3221736","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2022.3221736","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001964748","display_name":"Xinguo Lu","orcid":"https://orcid.org/0000-0001-8607-8121"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xinguo Lu","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0001-8607-8121","affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076614493","display_name":"Guan\u2010Yuan Chen","orcid":"https://orcid.org/0000-0002-0505-4089"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guanyuan Chen","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100711221","display_name":"Jinxin Li","orcid":"https://orcid.org/0000-0001-7031-9832"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinxin Li","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0001-7031-9832","affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066888366","display_name":"Xiangjin Hu","orcid":null},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiangjin Hu","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070735169","display_name":"Fengxu Sun","orcid":"https://orcid.org/0000-0002-4478-2898"},"institutions":[{"id":"https://openalex.org/I16609230","display_name":"Hunan University","ror":"https://ror.org/05htk5m33","country_code":"CN","type":"education","lineage":["https://openalex.org/I16609230"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fengxu Sun","raw_affiliation_strings":["College of Computer Science and Electronic Engineering, Hunan University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0002-4478-2898","affiliations":[{"raw_affiliation_string":"College of Computer Science and Electronic Engineering, Hunan University, Changsha, China","institution_ids":["https://openalex.org/I16609230"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5001964748"],"corresponding_institution_ids":["https://openalex.org/I16609230"],"apc_list":null,"apc_paid":null,"fwci":1.3887,"has_fulltext":false,"cited_by_count":17,"citation_normalized_percentile":{"value":0.81046153,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"20","issue":"5","first_page":"2681","last_page":"2689"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6505485773086548},{"id":"https://openalex.org/keywords/synthetic-lethality","display_name":"Synthetic lethality","score":0.606934666633606},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5397546887397766},{"id":"https://openalex.org/keywords/dependency-graph","display_name":"Dependency graph","score":0.4812993109226227},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.47555917501449585},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.42770785093307495},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.20303216576576233},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1493619978427887},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10279202461242676}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6505485773086548},{"id":"https://openalex.org/C2778502085","wikidata":"https://www.wikidata.org/wiki/Q7662767","display_name":"Synthetic lethality","level":4,"score":0.606934666633606},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5397546887397766},{"id":"https://openalex.org/C16311509","wikidata":"https://www.wikidata.org/wiki/Q4148050","display_name":"Dependency graph","level":3,"score":0.4812993109226227},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.47555917501449585},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.42770785093307495},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20303216576576233},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1493619978427887},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10279202461242676},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C134935766","wikidata":"https://www.wikidata.org/wiki/Q210538","display_name":"DNA repair","level":3,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2022.3221736","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2022.3221736","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36374879","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36374879","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8199999928474426,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G3647016673","display_name":null,"funder_award_id":"2021JJ30144","funder_id":"https://openalex.org/F4320322866","funder_display_name":"Natural Science Foundation of Hainan Province"},{"id":"https://openalex.org/G4196429476","display_name":null,"funder_award_id":"61972141","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322866","display_name":"Natural Science Foundation of Hainan Province","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W79139011","https://openalex.org/W1522301498","https://openalex.org/W1677182931","https://openalex.org/W1888005072","https://openalex.org/W1895317372","https://openalex.org/W1966182052","https://openalex.org/W1976526581","https://openalex.org/W2008229568","https://openalex.org/W2009931781","https://openalex.org/W2029346055","https://openalex.org/W2045953361","https://openalex.org/W2103017472","https://openalex.org/W2107710781","https://openalex.org/W2107975811","https://openalex.org/W2120098186","https://openalex.org/W2128049108","https://openalex.org/W2154851992","https://openalex.org/W2158485828","https://openalex.org/W2160584334","https://openalex.org/W2279299471","https://openalex.org/W2570589864","https://openalex.org/W2618439945","https://openalex.org/W2752877365","https://openalex.org/W2773775195","https://openalex.org/W2883054023","https://openalex.org/W2883529879","https://openalex.org/W2939312265","https://openalex.org/W2960968034","https://openalex.org/W2963277165","https://openalex.org/W2964015378","https://openalex.org/W2990747402","https://openalex.org/W2995178483","https://openalex.org/W3082122339","https://openalex.org/W3104097132","https://openalex.org/W3132019936","https://openalex.org/W3146811394","https://openalex.org/W3154874068","https://openalex.org/W3170256258","https://openalex.org/W3182822370","https://openalex.org/W4322614756","https://openalex.org/W6631190155","https://openalex.org/W6726873649","https://openalex.org/W6730084236"],"related_works":["https://openalex.org/W3093199425","https://openalex.org/W2125327283","https://openalex.org/W1508071893","https://openalex.org/W3200266554","https://openalex.org/W1971879969","https://openalex.org/W2144527026","https://openalex.org/W3028068108","https://openalex.org/W4301689247","https://openalex.org/W2626107530","https://openalex.org/W2595205408"],"abstract_inverted_index":{"Synthetic":[0],"lethality":[1,17,86],"(SL)":[2],"is":[3,57,118,168,181],"a":[4,53,59,135,142],"potential":[5,172],"cancer":[6],"therapeutic":[7],"strategy":[8],"and":[9,31,95,111,140],"drug":[10],"discovery.":[11],"Computational":[12],"approaches":[13],"to":[14,24,40,120,128,147,155,170,183,194],"identify":[15],"synthetic":[16,85,129,173],"genes":[18,100],"have":[19],"become":[20],"an":[21],"effective":[22],"complement":[23],"wet":[25],"experiments":[26],"which":[27],"are":[28],"time":[29],"consuming":[30],"costly.":[32],"Graph":[33,80],"convolutional":[34,116],"networks":[35],"(GCN)":[36],"has":[37],"been":[38],"utilized":[39,119],"such":[41,106],"prediction":[42],"task":[43],"as":[44,107],"be":[45],"good":[46],"at":[47],"capturing":[48],"the":[49,62,66,77,91,122,149,164,190],"neighborhood":[50],"dependency":[51],"in":[52],"graph.":[54],"However,":[55],"it":[56],"still":[58],"lack":[60],"of":[61,64,99,152,192],"mechanism":[63],"aggregating":[65,160],"complementary":[67],"neighboring":[68],"information":[69],"from":[70,101,124],"various":[71],"heterogeneous":[72],"graphs.":[73,162],"Here,":[74],"we":[75,89,133],"propose":[76,134],"Multiple":[78],"Attention":[79],"Convolution":[81],"Networks":[82],"for":[83],"predicting":[84],"(MAGCN).":[87],"First,":[88],"obtain":[90],"functional":[92],"similarity":[93],"features":[94,98],"topological":[96],"structure":[97],"different":[102,153],"data":[103,110],"sources":[104],"respectively,":[105],"Gene":[108],"Ontology":[109],"Protein-Protein":[112],"Interaction.":[113],"Then,":[114],"graph":[115],"network":[117,146],"accumulate":[121],"knowledge":[123],"neighbor":[125],"nodes":[126],"according":[127],"lethal":[130,174],"associations.":[131],"Meanwhile,":[132],"multiple":[136,143],"graphs":[137,144,154],"attention":[138,145],"model":[139],"construct":[141],"learn":[148],"contribution":[150],"factors":[151],"generate":[156],"embedded":[157],"representation":[158],"by":[159],"these":[161],"Finally,":[163],"generated":[165],"feature":[166],"matrix":[167],"decoded":[169],"predict":[171,195],"interaction.":[175],"Experimental":[176],"results":[177],"show":[178],"that":[179],"MAGCN":[180,193],"superior":[182],"other":[184],"baseline":[185],"methods.":[186],"Case":[187],"study":[188],"demonstrates":[189],"ability":[191],"human":[196],"SL":[197],"gene":[198],"pairs.":[199]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":3}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
