{"id":"https://openalex.org/W4286210881","doi":"https://doi.org/10.1109/tcbb.2022.3191325","title":"Multi-View Kernel Sparse Representation for Identification of Membrane Protein Types","display_name":"Multi-View Kernel Sparse Representation for Identification of Membrane Protein Types","publication_year":2022,"publication_date":"2022-07-20","ids":{"openalex":"https://openalex.org/W4286210881","doi":"https://doi.org/10.1109/tcbb.2022.3191325"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2022.3191325","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2022.3191325","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110926760","display_name":"Yuqing Qian","orcid":"https://orcid.org/0009-0004-7460-4947"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yuqing Qian","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100688233","display_name":"Yijie Ding","orcid":"https://orcid.org/0000-0003-2911-7643"},"institutions":[{"id":"https://openalex.org/I4210123686","display_name":"Quzhou University","ror":"https://ror.org/024nfx323","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210123686"]},{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yijie Ding","raw_affiliation_strings":["Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, Quzhou, China"],"affiliations":[{"raw_affiliation_string":"Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, Quzhou, China","institution_ids":["https://openalex.org/I4210123686","https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017426085","display_name":"Quan Zou","orcid":"https://orcid.org/0000-0001-6406-1142"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Quan Zou","raw_affiliation_strings":["Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Institute of Fundamental and Frontier Sciences, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100702161","display_name":"Fei Guo","orcid":"https://orcid.org/0000-0001-8346-0798"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fei Guo","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5110926760"],"corresponding_institution_ids":["https://openalex.org/I308837"],"apc_list":null,"apc_paid":null,"fwci":2.9165,"has_fulltext":false,"cited_by_count":34,"citation_normalized_percentile":{"value":0.92234314,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"20","issue":"2","first_page":"1234","last_page":"1245"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9940999746322632,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6034408211708069},{"id":"https://openalex.org/keywords/kernel","display_name":"Kernel (algebra)","score":0.5930800437927246},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5425854325294495},{"id":"https://openalex.org/keywords/membrane-protein","display_name":"Membrane protein","score":0.5263094902038574},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4995763301849365},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.46276965737342834},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4572635889053345},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.45437687635421753},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.4516425132751465},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.45074254274368286},{"id":"https://openalex.org/keywords/kernel-method","display_name":"Kernel method","score":0.4132727086544037},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.4128819704055786},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.40594908595085144},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.39145272970199585},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.29527777433395386},{"id":"https://openalex.org/keywords/membrane","display_name":"Membrane","score":0.2591862380504608},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.24040067195892334},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.22300785779953003},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.16384825110435486},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1631668210029602}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6034408211708069},{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.5930800437927246},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5425854325294495},{"id":"https://openalex.org/C144647389","wikidata":"https://www.wikidata.org/wiki/Q423042","display_name":"Membrane protein","level":3,"score":0.5263094902038574},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4995763301849365},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.46276965737342834},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4572635889053345},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.45437687635421753},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.4516425132751465},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.45074254274368286},{"id":"https://openalex.org/C122280245","wikidata":"https://www.wikidata.org/wiki/Q620622","display_name":"Kernel method","level":3,"score":0.4132727086544037},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.4128819704055786},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.40594908595085144},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.39145272970199585},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.29527777433395386},{"id":"https://openalex.org/C41625074","wikidata":"https://www.wikidata.org/wiki/Q176088","display_name":"Membrane","level":2,"score":0.2591862380504608},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.24040067195892334},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.22300785779953003},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.16384825110435486},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1631668210029602},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/tcbb.2022.3191325","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2022.3191325","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8534317746","display_name":null,"funder_award_id":"NSFC 62172076","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":68,"referenced_works":["https://openalex.org/W437551428","https://openalex.org/W1494484168","https://openalex.org/W1496317909","https://openalex.org/W1496604422","https://openalex.org/W1544009106","https://openalex.org/W1561152804","https://openalex.org/W1907775068","https://openalex.org/W1964749215","https://openalex.org/W1978136924","https://openalex.org/W1980897319","https://openalex.org/W1996989509","https://openalex.org/W2001028520","https://openalex.org/W2006346802","https://openalex.org/W2018235493","https://openalex.org/W2020194549","https://openalex.org/W2024767324","https://openalex.org/W2026710881","https://openalex.org/W2032188627","https://openalex.org/W2035979693","https://openalex.org/W2036956828","https://openalex.org/W2040033996","https://openalex.org/W2041411297","https://openalex.org/W2045088880","https://openalex.org/W2063088204","https://openalex.org/W2083436148","https://openalex.org/W2085461725","https://openalex.org/W2105681109","https://openalex.org/W2114010544","https://openalex.org/W2114535505","https://openalex.org/W2124436456","https://openalex.org/W2128603141","https://openalex.org/W2129812935","https://openalex.org/W2145889472","https://openalex.org/W2145957695","https://openalex.org/W2147580225","https://openalex.org/W2149730127","https://openalex.org/W2151155403","https://openalex.org/W2156125289","https://openalex.org/W2160547390","https://openalex.org/W2171837816","https://openalex.org/W2173801226","https://openalex.org/W2398196955","https://openalex.org/W2470414691","https://openalex.org/W2524367868","https://openalex.org/W2605644966","https://openalex.org/W2736141869","https://openalex.org/W2748458402","https://openalex.org/W2757522837","https://openalex.org/W2767813457","https://openalex.org/W2770006469","https://openalex.org/W2771872406","https://openalex.org/W2789363643","https://openalex.org/W2900490197","https://openalex.org/W2991529680","https://openalex.org/W2996404781","https://openalex.org/W3046185688","https://openalex.org/W3099463079","https://openalex.org/W3163983852","https://openalex.org/W3192918171","https://openalex.org/W3194531251","https://openalex.org/W4200268969","https://openalex.org/W4236354716","https://openalex.org/W4285616475","https://openalex.org/W4312837179","https://openalex.org/W6615313317","https://openalex.org/W6631551231","https://openalex.org/W6633522393","https://openalex.org/W6799754834"],"related_works":["https://openalex.org/W2089892314","https://openalex.org/W4386075310","https://openalex.org/W2095626363","https://openalex.org/W2169565408","https://openalex.org/W1603091392","https://openalex.org/W2121506664","https://openalex.org/W2127229869","https://openalex.org/W3123056048","https://openalex.org/W2150638158","https://openalex.org/W2363184354"],"abstract_inverted_index":{"Membrane":[0],"proteins":[1,34],"are":[2],"the":[3,31,37,43,52,66,95],"main":[4],"undertaker":[5],"of":[6,18,21,33,39,55,68,80,114,154],"biomembrane":[7],"functions":[8],"and":[9,35,48,111,136],"play":[10],"a":[11,26,77,126,138],"vital":[12],"role":[13],"in":[14,29],"many":[15],"biological":[16,69],"activities":[17],"organisms.":[19],"Prediction":[20],"membrane":[22,40,56,155],"protein":[23,57,96],"types":[24],"has":[25],"great":[27],"help":[28],"determining":[30],"function":[32],"understanding":[36],"interactions":[38],"proteins.":[41,156],"However,":[42],"biochemical":[44],"experiment":[45],"is":[46,98,164],"expensive":[47],"not":[49,88],"suitable":[50],"for":[51,129],"large-scale":[53],"identification":[54],"types.":[58],"Therefore,":[59],"computational":[60,73],"methods":[61,74],"were":[62],"used":[63],"to":[64,167],"improve":[65],"efficiency":[67],"experiments.":[70],"Most":[71],"existing":[72,169],"only":[75],"use":[76,83],"single":[78],"feature":[79],"protein,":[81],"or":[82],"multiple":[84],"features":[85],"but":[86],"do":[87],"integrate":[89],"these":[90],"well.":[91],"In":[92],"our":[93,147,162],"study,":[94],"sequence":[97],"described":[99],"via":[100],"three":[101],"different":[102],"views":[103,122],"(features),":[104,123],"including":[105],"amino":[106,115],"acid":[107],"composition,":[108],"evolutionary":[109],"information":[110,119],"physicochemical":[112],"properties":[113],"acids.":[116],"To":[117],"exploit":[118],"among":[120],"all":[121,168],"we":[124],"introduce":[125],"coupling":[127],"strategy":[128],"Kernel":[130],"Sparse":[131],"Representation":[132],"based":[133],"Classification":[134],"(KSRC)":[135],"construct":[137],"new":[139],"model":[140],"called":[141],"Multi-view":[142],"KSRC":[143],"(MvKSRC).":[144],"We":[145],"implement":[146],"method":[148,163],"on":[149],"4":[150],"benchmark":[151],"data":[152],"sets":[153],"The":[157],"comparison":[158],"results":[159],"indicate":[160],"that":[161],"much":[165],"superior":[166],"methods.":[170]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":24},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2022-07-21T00:00:00"}
