{"id":"https://openalex.org/W4282936572","doi":"https://doi.org/10.1109/tcbb.2022.3178446","title":"Secure Counting Query Protocol for Genomic Data","display_name":"Secure Counting Query Protocol for Genomic Data","publication_year":2022,"publication_date":"2022-06-06","ids":{"openalex":"https://openalex.org/W4282936572","doi":"https://doi.org/10.1109/tcbb.2022.3178446","pmid":"https://pubmed.ncbi.nlm.nih.gov/35666798"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2022.3178446","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2022.3178446","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044622318","display_name":"Yatong Jiang","orcid":"https://orcid.org/0000-0003-3438-6442"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yatong Jiang","raw_affiliation_strings":["School of Cyber Science and Technology, Beihang University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Cyber Science and Technology, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039586121","display_name":"Tao Shang","orcid":"https://orcid.org/0000-0003-2369-1521"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tao Shang","raw_affiliation_strings":["School of Cyber Science and Technology, Beihang University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Cyber Science and Technology, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100425107","display_name":"Jianwei Liu","orcid":"https://orcid.org/0000-0003-2965-3518"},"institutions":[{"id":"https://openalex.org/I82880672","display_name":"Beihang University","ror":"https://ror.org/00wk2mp56","country_code":"CN","type":"education","lineage":["https://openalex.org/I82880672"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianwei Liu","raw_affiliation_strings":["School of Cyber Science and Technology, Beihang University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"School of Cyber Science and Technology, Beihang University, Beijing, China","institution_ids":["https://openalex.org/I82880672"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5044622318"],"corresponding_institution_ids":["https://openalex.org/I82880672"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.05250896,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"20","issue":"2","first_page":"1457","last_page":"1468"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10237","display_name":"Cryptography and Data Security","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10764","display_name":"Privacy-Preserving Technologies in Data","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11614","display_name":"Cloud Data Security Solutions","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/homomorphic-encryption","display_name":"Homomorphic encryption","score":0.8220418691635132},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7884070873260498},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.6454634666442871},{"id":"https://openalex.org/keywords/protocol","display_name":"Protocol (science)","score":0.6258647441864014},{"id":"https://openalex.org/keywords/encryption","display_name":"Encryption","score":0.5028595328330994},{"id":"https://openalex.org/keywords/big-data","display_name":"Big data","score":0.4663848876953125},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.45877110958099365},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.15132051706314087},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.0986398458480835}],"concepts":[{"id":"https://openalex.org/C158338273","wikidata":"https://www.wikidata.org/wiki/Q2154943","display_name":"Homomorphic encryption","level":3,"score":0.8220418691635132},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7884070873260498},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.6454634666442871},{"id":"https://openalex.org/C2780385302","wikidata":"https://www.wikidata.org/wiki/Q367158","display_name":"Protocol (science)","level":3,"score":0.6258647441864014},{"id":"https://openalex.org/C148730421","wikidata":"https://www.wikidata.org/wiki/Q141090","display_name":"Encryption","level":2,"score":0.5028595328330994},{"id":"https://openalex.org/C75684735","wikidata":"https://www.wikidata.org/wiki/Q858810","display_name":"Big data","level":2,"score":0.4663848876953125},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.45877110958099365},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.15132051706314087},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0986398458480835},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016494","descriptor_name":"Computer Security","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2022.3178446","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2022.3178446","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35666798","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35666798","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3202760126","display_name":null,"funder_award_id":"2018ZC51016","funder_id":"https://openalex.org/F4320322857","funder_display_name":"Aeronautical Science Foundation of China"},{"id":"https://openalex.org/G5753357002","display_name":null,"funder_award_id":"61971021","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8494008570","display_name":null,"funder_award_id":"61571024","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322857","display_name":"Aeronautical Science Foundation of China","ror":"https://ror.org/02wq41p38"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1566400168","https://openalex.org/W1714926069","https://openalex.org/W1987521207","https://openalex.org/W1992282993","https://openalex.org/W1998014948","https://openalex.org/W2040228409","https://openalex.org/W2045970339","https://openalex.org/W2047984110","https://openalex.org/W2088492763","https://openalex.org/W2124398102","https://openalex.org/W2132172731","https://openalex.org/W2141481372","https://openalex.org/W2154357802","https://openalex.org/W2168610667","https://openalex.org/W2201294065","https://openalex.org/W2211774783","https://openalex.org/W2218239923","https://openalex.org/W2284068942","https://openalex.org/W2329967011","https://openalex.org/W2548929494","https://openalex.org/W2592139723","https://openalex.org/W2596199572","https://openalex.org/W2618028147","https://openalex.org/W2751873519","https://openalex.org/W2783296048","https://openalex.org/W2805670944","https://openalex.org/W2886904996","https://openalex.org/W2949524341","https://openalex.org/W2956528105","https://openalex.org/W6634915617","https://openalex.org/W6712422079","https://openalex.org/W6748487494"],"related_works":["https://openalex.org/W2539930818","https://openalex.org/W4390664647","https://openalex.org/W4390608645","https://openalex.org/W4247566972","https://openalex.org/W3012147850","https://openalex.org/W2960264696","https://openalex.org/W3090563135","https://openalex.org/W2497432351","https://openalex.org/W4313300189","https://openalex.org/W2949835517"],"abstract_inverted_index":{"Statistical":[0],"analysis":[1,27,90],"on":[2,64,83,142,193],"genomic":[3,17,62,81,93,118,134,190],"data":[4,45,60,82,94,109,119,125,135,191],"can":[5,28,78,136,166],"explore":[6],"the":[7,16,30,40,49,92,117,124,146,158,164,168],"relationship":[8],"between":[9],"gene":[10],"sequence":[11],"and":[12,20,33,113,140],"phenotype.":[13],"Particularly,":[14],"counting":[15,74,102,155,170],"mutation":[18],"samples":[19],"associating":[21],"with":[22],"related":[23],"phenotypes":[24],"for":[25,196],"statistical":[26,52,89,197],"annotate":[29],"variation":[31,43],"sites":[32],"help":[34],"to":[35,47,57,122,153,188],"diagnose":[36],"genovariation.":[37],"Expansion":[38],"of":[39,42,51,91,108,157],"size":[41],"sample":[44],"helps":[46],"increase":[48],"accuracy":[50],"analysis.":[53,198],"It":[54],"is":[55,120,130,151,178],"feasible":[56,186],"securely":[58,79,138,192],"share":[59,80,189],"from":[61],"databases":[63],"cloud":[65,84,111,143,194],"platforms.":[66,85],"In":[67],"this":[68],"paper,":[69],"we":[70],"design":[71],"a":[72,185],"secure":[73],"query":[75,114,169,176],"protocol":[76,87,165],"that":[77,133,163],"Our":[86],"supports":[88],"in":[95],"VCF":[96],"(Variant":[97],"Call":[98],"Format)":[99],"files":[100],"by":[101],"query.":[103],"There":[104],"are":[105],"three":[106],"participants":[107],"owner,":[110],"platform":[112,195],"party.":[115],"Firstly,":[116],"preprocessed":[121],"reduce":[123],"size.":[126],"Secondly,":[127],"Paillier":[128],"homomorphic":[129,173],"used":[131,152],"so":[132],"be":[137,149],"shared":[139],"calculated":[141],"platform.":[144],"Finally,":[145],"results":[147,161],"which":[148,183],"decrypted":[150],"implement":[154,167],"function":[156,171],"protocol.":[159],"Experimental":[160],"show":[162],"after":[172],"encryption.":[174],"The":[175],"time":[177],"less":[179],"than":[180],"1":[181],"s,":[182],"provide":[184],"solution":[187]},"counts_by_year":[],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
