{"id":"https://openalex.org/W4282914801","doi":"https://doi.org/10.1109/tcbb.2022.3178087","title":"ADmeth: A Manually Curated Database for the Differential Methylation in Alzheimer's Disease","display_name":"ADmeth: A Manually Curated Database for the Differential Methylation in Alzheimer's Disease","publication_year":2022,"publication_date":"2022-05-26","ids":{"openalex":"https://openalex.org/W4282914801","doi":"https://doi.org/10.1109/tcbb.2022.3178087","pmid":"https://pubmed.ncbi.nlm.nih.gov/35617175"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2022.3178087","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2022.3178087","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103182832","display_name":"Xiaoqing Peng","orcid":"https://orcid.org/0000-0002-4099-5183"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoqing Peng","raw_affiliation_strings":["Center for Medical Genetics and Hunan Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0002-4099-5183","affiliations":[{"raw_affiliation_string":"Center for Medical Genetics and Hunan Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025726576","display_name":"Wenjin Zhang","orcid":"https://orcid.org/0000-0002-3541-7282"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenjin Zhang","raw_affiliation_strings":["Center for Medical Genetics and Hunan Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Medical Genetics and Hunan Key Laboratory of Medical Genetics, School of Life Sciences, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065927556","display_name":"Wanxin Cui","orcid":null},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wanxin Cui","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043766700","display_name":"Binrong Ding","orcid":null},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]},{"id":"https://openalex.org/I4210156904","display_name":"Third Xiangya Hospital","ror":"https://ror.org/05akvb491","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210156904"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Binrong Ding","raw_affiliation_strings":["The Third Xiangya Hospital, Central South University, Changsha, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The Third Xiangya Hospital, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479","https://openalex.org/I4210156904"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052786213","display_name":"Qingtong Lyu","orcid":null},"institutions":[{"id":"https://openalex.org/I146655781","display_name":"University of Liverpool","ror":"https://ror.org/04xs57h96","country_code":"GB","type":"education","lineage":["https://openalex.org/I146655781"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Qingtong Lyu","raw_affiliation_strings":["Department of Computer Science, University of Liverpool, Liverpool, U.K"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Liverpool, Liverpool, U.K","institution_ids":["https://openalex.org/I146655781"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100438360","display_name":"Jianxin Wang","orcid":"https://orcid.org/0000-0003-1516-0480"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianxin Wang","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0003-1516-0480","affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.019,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.7376637,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"20","issue":"2","first_page":"843","last_page":"851"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12267","display_name":"Diet and metabolism studies","score":0.9807000160217285,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11928","display_name":"Genetic Syndromes and Imprinting","score":0.9502000212669373,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/methylation","display_name":"Methylation","score":0.5243169069290161},{"id":"https://openalex.org/keywords/differential","display_name":"Differential (mechanical device)","score":0.5197291374206543},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.476179301738739},{"id":"https://openalex.org/keywords/alzheimers-disease","display_name":"Alzheimer's disease","score":0.41854768991470337},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4179953932762146},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40061792731285095},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.35133129358291626},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.32272547483444214},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.30654510855674744},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.30273663997650146},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.16374853253364563},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0981954038143158},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.086285799741745},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.05169910192489624}],"concepts":[{"id":"https://openalex.org/C33288867","wikidata":"https://www.wikidata.org/wiki/Q518328","display_name":"Methylation","level":3,"score":0.5243169069290161},{"id":"https://openalex.org/C93226319","wikidata":"https://www.wikidata.org/wiki/Q193137","display_name":"Differential (mechanical device)","level":2,"score":0.5197291374206543},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.476179301738739},{"id":"https://openalex.org/C502032728","wikidata":"https://www.wikidata.org/wiki/Q11081","display_name":"Alzheimer's disease","level":3,"score":0.41854768991470337},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4179953932762146},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40061792731285095},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.35133129358291626},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.32272547483444214},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.30654510855674744},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.30273663997650146},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.16374853253364563},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0981954038143158},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.086285799741745},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.05169910192489624},{"id":"https://openalex.org/C146978453","wikidata":"https://www.wikidata.org/wiki/Q3798668","display_name":"Aerospace engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D000544","descriptor_name":"Alzheimer Disease","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true},{"descriptor_ui":"D019636","descriptor_name":"Neurodegenerative Diseases","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2022.3178087","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2022.3178087","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35617175","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35617175","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5766595311","display_name":null,"funder_award_id":"2022ZD0213700","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":71,"referenced_works":["https://openalex.org/W319352439","https://openalex.org/W1565831347","https://openalex.org/W1579578067","https://openalex.org/W1805975457","https://openalex.org/W1890008664","https://openalex.org/W1981882015","https://openalex.org/W1985678542","https://openalex.org/W1991244004","https://openalex.org/W1999659629","https://openalex.org/W2020089910","https://openalex.org/W2020388524","https://openalex.org/W2030030941","https://openalex.org/W2036268594","https://openalex.org/W2059505482","https://openalex.org/W2074750860","https://openalex.org/W2077730361","https://openalex.org/W2096223549","https://openalex.org/W2132582013","https://openalex.org/W2139031446","https://openalex.org/W2142257318","https://openalex.org/W2171756777","https://openalex.org/W2228889533","https://openalex.org/W2279197036","https://openalex.org/W2287980654","https://openalex.org/W2308936627","https://openalex.org/W2329955766","https://openalex.org/W2341828758","https://openalex.org/W2462660637","https://openalex.org/W2491434135","https://openalex.org/W2512373000","https://openalex.org/W2550388996","https://openalex.org/W2556310923","https://openalex.org/W2557962097","https://openalex.org/W2566350735","https://openalex.org/W2571188139","https://openalex.org/W2588116568","https://openalex.org/W2594498166","https://openalex.org/W2618761368","https://openalex.org/W2754986420","https://openalex.org/W2766547604","https://openalex.org/W2775321388","https://openalex.org/W2789414284","https://openalex.org/W2790539309","https://openalex.org/W2883543736","https://openalex.org/W2884329485","https://openalex.org/W2887819168","https://openalex.org/W2888422740","https://openalex.org/W2892812660","https://openalex.org/W2898021622","https://openalex.org/W2938014360","https://openalex.org/W2945063373","https://openalex.org/W2954296107","https://openalex.org/W2971083208","https://openalex.org/W2991469415","https://openalex.org/W3026944548","https://openalex.org/W3035710795","https://openalex.org/W3044091925","https://openalex.org/W3048041697","https://openalex.org/W3091154116","https://openalex.org/W3093304720","https://openalex.org/W3103817759","https://openalex.org/W3107160482","https://openalex.org/W3126427455","https://openalex.org/W3126781621","https://openalex.org/W3127501779","https://openalex.org/W3162943200","https://openalex.org/W3167564676","https://openalex.org/W3168596946","https://openalex.org/W4214828992","https://openalex.org/W6638472360","https://openalex.org/W6688469789"],"related_works":["https://openalex.org/W1455488868","https://openalex.org/W2793107484","https://openalex.org/W2071872705","https://openalex.org/W2048794814","https://openalex.org/W4312019931","https://openalex.org/W4286852561","https://openalex.org/W3151269007","https://openalex.org/W2105651892","https://openalex.org/W2384299386","https://openalex.org/W2378413371"],"abstract_inverted_index":{"Alzheimer's":[0],"disease":[1],"(AD)":[2],"is":[3,17,51,158],"the":[4,21,100,126,140,147],"most":[5],"common":[6],"neurodegenerative":[7],"disease.":[8],"More":[9],"and":[10,32,95,107,120,145],"more":[11],"evidence":[12],"show":[13],"that":[14,125],"DNA":[15,149],"methylation":[16,59,136],"closely":[18],"related":[19],"to":[20,55,61,67,117,132],"pathological":[22,141],"mechanism":[23,142],"of":[24,84,143,153],"AD.":[25,154],"Many":[26],"AD-associated":[27,135],"differentially":[28,87],"methylated":[29,88],"genes,":[30,104],"regions":[31,94,106],"CpG":[33,109],"sites":[34],"have":[35,43],"been":[36],"identified":[37,90],"in":[38,46,99,138],"recent":[39],"researches,":[40],"which":[41,80],"may":[42],"great":[44],"potential":[45],"clinical":[47],"research.":[48],"However,":[49],"there":[50],"no":[52],"dedicated":[53],"database":[54,72,113,128,157],"collect":[56],"AD-related":[57,86],"differential":[58],"up":[60],"now.":[62],"To":[63],"provide":[64],"a":[65,71,82],"reference":[66],"researchers,":[68],"we":[69],"design":[70],"named":[73],"ADmeth":[74,112,127,156],"by":[75],"manually":[76],"curating":[77],"relevant":[78],"articles,":[79],"contains":[81],"total":[83],"16,709":[85],"items":[89],"from":[91],"different":[92,96],"brain":[93],"cell":[97],"types":[98],"blood,":[101],"involving":[102],"209":[103],"2,229":[105],"14,271":[108],"sites.":[110],"The":[111,155],"provides":[114],"user-friendly":[115],"pages":[116],"search,":[118],"submit":[119],"download":[121],"data.":[122],"We":[123],"hope":[124],"can":[129],"facilitate":[130],"researchers":[131],"select":[133],"candidate":[134],"markers":[137],"revealing":[139],"AD":[144],"promote":[146],"cell-free":[148],"based":[150],"non-invasive":[151],"diagnosis":[152],"available":[159],"at":[160],"http://www.biobdlab.cn/ADmeth.":[161]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2025-10-10T00:00:00"}
