{"id":"https://openalex.org/W3213915071","doi":"https://doi.org/10.1109/tcbb.2021.3128172","title":"G Protein-Coupled Receptor Interaction Prediction Based on Deep Transfer Learning","display_name":"G Protein-Coupled Receptor Interaction Prediction Based on Deep Transfer Learning","publication_year":2021,"publication_date":"2021-11-15","ids":{"openalex":"https://openalex.org/W3213915071","doi":"https://doi.org/10.1109/tcbb.2021.3128172","mag":"3213915071","pmid":"https://pubmed.ncbi.nlm.nih.gov/34780331"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2021.3128172","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2021.3128172","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Tengsheng Jiang","orcid":null},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Tengsheng Jiang","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Yuhui Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuhui Chen","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Shixuan Guan","orcid":"https://orcid.org/0000-0003-4564-6297"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shixuan Guan","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Zhongtian Hu","orcid":null},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhongtian Hu","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Weizhong Lu","orcid":null},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weizhong Lu","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Qiming Fu","orcid":"https://orcid.org/0000-0001-9757-4323"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiming Fu","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Yijie Ding","orcid":"https://orcid.org/0000-0003-2911-7643"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yijie Ding","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Haiou Li","orcid":"https://orcid.org/0000-0002-5808-9330"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haiou Li","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou University of Science and Technology, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"last","author":{"id":null,"display_name":"Hongjie Wu","orcid":"https://orcid.org/0000-0001-5921-8707"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongjie Wu","raw_affiliation_strings":["School of Electronic and Information Engineering, Suzhou Smart City Research Institute, Suzhou University of Science and Technology, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"School of Electronic and Information Engineering, Suzhou Smart City Research Institute, Suzhou University of Science and Technology, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I308837"],"apc_list":null,"apc_paid":null,"fwci":0.0813,"has_fulltext":false,"cited_by_count":4,"citation_normalized_percentile":{"value":0.45508626,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"19","issue":"6","first_page":"3126","last_page":"3134"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.5825999975204468,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.5825999975204468,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.2329999953508377,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.011099999770522118,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/initialization","display_name":"Initialization","score":0.683899998664856},{"id":"https://openalex.org/keywords/transfer-of-learning","display_name":"Transfer of learning","score":0.64410001039505},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5188000202178955},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.517799973487854},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5080999732017517},{"id":"https://openalex.org/keywords/g-protein-coupled-receptor","display_name":"G protein-coupled receptor","score":0.4377000033855438},{"id":"https://openalex.org/keywords/independent-and-identically-distributed-random-variables","display_name":"Independent and identically distributed random variables","score":0.4129999876022339},{"id":"https://openalex.org/keywords/divergence","display_name":"Divergence (linguistics)","score":0.3840999901294708}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6873999834060669},{"id":"https://openalex.org/C114466953","wikidata":"https://www.wikidata.org/wiki/Q6034165","display_name":"Initialization","level":2,"score":0.683899998664856},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6503999829292297},{"id":"https://openalex.org/C150899416","wikidata":"https://www.wikidata.org/wiki/Q1820378","display_name":"Transfer of learning","level":2,"score":0.64410001039505},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.590499997138977},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5188000202178955},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.517799973487854},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5080999732017517},{"id":"https://openalex.org/C135285700","wikidata":"https://www.wikidata.org/wiki/Q38173","display_name":"G protein-coupled receptor","level":3,"score":0.4377000033855438},{"id":"https://openalex.org/C141513077","wikidata":"https://www.wikidata.org/wiki/Q378542","display_name":"Independent and identically distributed random variables","level":3,"score":0.4129999876022339},{"id":"https://openalex.org/C207390915","wikidata":"https://www.wikidata.org/wiki/Q1230525","display_name":"Divergence (linguistics)","level":2,"score":0.3840999901294708},{"id":"https://openalex.org/C58973888","wikidata":"https://www.wikidata.org/wiki/Q1041418","display_name":"Semi-supervised learning","level":2,"score":0.3327000141143799},{"id":"https://openalex.org/C198531522","wikidata":"https://www.wikidata.org/wiki/Q485146","display_name":"Sample (material)","level":2,"score":0.31520000100135803},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.29429998993873596},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.27160000801086426},{"id":"https://openalex.org/C3020318244","wikidata":"https://www.wikidata.org/wiki/Q4812187","display_name":"Large sample","level":2,"score":0.2709999978542328},{"id":"https://openalex.org/C9357733","wikidata":"https://www.wikidata.org/wiki/Q6878417","display_name":"Missing data","level":2,"score":0.2676999866962433},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.2590000033378601},{"id":"https://openalex.org/C67186912","wikidata":"https://www.wikidata.org/wiki/Q367664","display_name":"Data modeling","level":2,"score":0.2556999921798706},{"id":"https://openalex.org/C2776175482","wikidata":"https://www.wikidata.org/wiki/Q1195816","display_name":"Transfer (computing)","level":2,"score":0.2547000050544739},{"id":"https://openalex.org/C2984842247","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep neural networks","level":3,"score":0.251800000667572}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D043562","descriptor_name":"Receptors, G-Protein-Coupled","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D043562","descriptor_name":"Receptors, G-Protein-Coupled","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D043562","descriptor_name":"Receptors, G-Protein-Coupled","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2021.3128172","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2021.3128172","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34780331","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34780331","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W1934923538","https://openalex.org/W1975691556","https://openalex.org/W2005957699","https://openalex.org/W2007618103","https://openalex.org/W2021852343","https://openalex.org/W2028928739","https://openalex.org/W2033855745","https://openalex.org/W2050159278","https://openalex.org/W2053848019","https://openalex.org/W2056756773","https://openalex.org/W2091411809","https://openalex.org/W2091988898","https://openalex.org/W2099869876","https://openalex.org/W2115403315","https://openalex.org/W2132464866","https://openalex.org/W2136799255","https://openalex.org/W2143720865","https://openalex.org/W2147088137","https://openalex.org/W2152630148","https://openalex.org/W2155004936","https://openalex.org/W2165698076","https://openalex.org/W2166701319","https://openalex.org/W2295598076","https://openalex.org/W2330697475","https://openalex.org/W2345920240","https://openalex.org/W2604694953","https://openalex.org/W2740678359","https://openalex.org/W2769154729","https://openalex.org/W2773346592","https://openalex.org/W2777807685","https://openalex.org/W2783285310","https://openalex.org/W2784672273","https://openalex.org/W2810570119","https://openalex.org/W2886037034","https://openalex.org/W2899991546","https://openalex.org/W2911076526","https://openalex.org/W2911632687","https://openalex.org/W2945515348","https://openalex.org/W2947027538","https://openalex.org/W2950489801","https://openalex.org/W2964708888","https://openalex.org/W2964758100","https://openalex.org/W2965386541","https://openalex.org/W2965395150","https://openalex.org/W2966018231","https://openalex.org/W2969526619","https://openalex.org/W6639956479"],"related_works":[],"abstract_inverted_index":{"G":[0,19],"protein-coupled":[1],"receptors":[2],"(GPCRs)":[3],"account":[4],"for":[5,127,152,160],"about":[6],"40%":[7],"to":[8,18,32,70,131,134],"50%":[9],"of":[10,25,48,64,77,168],"drug":[11],"targets.":[12],"Many":[13],"human":[14],"diseases":[15],"are":[16],"related":[17],"protein":[20],"coupled":[21],"receptors.":[22],"Accurate":[23],"prediction":[24,47],"GPCR":[26,49,79,157],"interaction":[27,50],"is":[28,85,150,158,171],"not":[29],"only":[30],"essential":[31],"understand":[33],"its":[34],"structural":[35],"role,":[36],"but":[37],"also":[38],"helps":[39],"design":[40],"more":[41],"effective":[42],"drugs.":[43],"At":[44],"present,":[45],"the":[46,75,120,141,147,166],"mainly":[51],"uses":[52],"machine":[53],"learning":[54,57,88,106],"methods.":[55,176],"Machine":[56],"methods":[58],"generally":[59],"require":[60],"a":[61,90,104,115,136],"large":[62],"number":[63,76],"independent":[65],"and":[66,118],"identically":[67],"distributed":[68],"samples":[69,80,133],"achieve":[71],"good":[72],"results.":[73],"However,":[74],"available":[78],"that":[81],"have":[82],"been":[83],"marked":[84],"scarce.":[86],"Transfer":[87],"has":[89],"strong":[91],"advantage":[92],"in":[93],"dealing":[94],"with":[95],"such":[96],"small":[97],"sample":[98,110],"problems.":[99],"Therefore,":[100],"this":[101],"paper":[102],"proposes":[103],"transfer":[105,132],"method":[107,170],"based":[108,123,145],"on":[109,124,146],"similarity,":[111],"using":[112,119],"XGBoost":[113],"as":[114],"weak":[116],"classifier":[117],"TrAdaBoost":[121],"algorithm":[122],"JS":[125],"divergence":[126],"data":[128,137],"weight":[129],"initialization":[130],"construct":[135],"set.":[138],"After":[139],"that,":[140],"deep":[142],"neural":[143],"network":[144],"attention":[148],"mechanism":[149],"used":[151,159],"model":[153],"training.":[154],"The":[155],"existing":[156],"prediction.":[161],"In":[162],"short-distance":[163],"contact":[164],"prediction,":[165],"accuracy":[167],"our":[169],"0.26":[172],"higher":[173],"than":[174],"similar":[175]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-04-02T15:55:50.835912","created_date":"2021-11-22T00:00:00"}
