{"id":"https://openalex.org/W3196810252","doi":"https://doi.org/10.1109/tcbb.2021.3110127","title":"An Integrative Disease Information Network Approach to Similar Disease Detection","display_name":"An Integrative Disease Information Network Approach to Similar Disease Detection","publication_year":2021,"publication_date":"2021-09-03","ids":{"openalex":"https://openalex.org/W3196810252","doi":"https://doi.org/10.1109/tcbb.2021.3110127","mag":"3196810252","pmid":"https://pubmed.ncbi.nlm.nih.gov/34478379"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2021.3110127","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2021.3110127","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://figshare.com/articles/journal_contribution/An_Integrative_Disease_Information_Network_Approach_to_Similar_Disease_Detection/27577056","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054270673","display_name":"Wuli Xu","orcid":"https://orcid.org/0000-0002-0883-6190"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]},{"id":"https://openalex.org/I4210125143","display_name":"Chengdu University","ror":"https://ror.org/034z67559","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210125143"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wuli Xu","raw_affiliation_strings":["School of Computer Science, Sichuan University, Chengdu, China"],"raw_orcid":"https://orcid.org/0000-0002-0883-6190","affiliations":[{"raw_affiliation_string":"School of Computer Science, Sichuan University, Chengdu, China","institution_ids":["https://openalex.org/I24185976","https://openalex.org/I4210125143"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103153652","display_name":"Lei Duan","orcid":"https://orcid.org/0000-0001-7254-1832"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]},{"id":"https://openalex.org/I4210125143","display_name":"Chengdu University","ror":"https://ror.org/034z67559","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210125143"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lei Duan","raw_affiliation_strings":["School of Computer Science, Sichuan University, Chengdu, China"],"raw_orcid":"https://orcid.org/0000-0001-7254-1832","affiliations":[{"raw_affiliation_string":"School of Computer Science, Sichuan University, Chengdu, China","institution_ids":["https://openalex.org/I24185976","https://openalex.org/I4210125143"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024401909","display_name":"Huiru Zheng","orcid":"https://orcid.org/0000-0001-7648-8709"},"institutions":[{"id":"https://openalex.org/I138801177","display_name":"University of Ulster","ror":"https://ror.org/01yp9g959","country_code":"GB","type":"education","lineage":["https://openalex.org/I138801177"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Huiru Zheng","raw_affiliation_strings":["School of Computing, Ulster University, Northern Ireland, U.K"],"raw_orcid":"https://orcid.org/0000-0001-7648-8709","affiliations":[{"raw_affiliation_string":"School of Computing, Ulster University, Northern Ireland, U.K","institution_ids":["https://openalex.org/I138801177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042718871","display_name":"Jesse Li\u2010Ling","orcid":"https://orcid.org/0000-0003-1723-9088"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jesse Li-Ling","raw_affiliation_strings":["State Laboratory of Biotherapy, Sichuan University, Chengdu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Laboratory of Biotherapy, Sichuan University, Chengdu, China","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047066187","display_name":"Weipeng Jiang","orcid":"https://orcid.org/0000-0002-3028-891X"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]},{"id":"https://openalex.org/I4210125143","display_name":"Chengdu University","ror":"https://ror.org/034z67559","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210125143"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weipeng Jiang","raw_affiliation_strings":["School of Computer Science, Sichuan University, Chengdu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Sichuan University, Chengdu, China","institution_ids":["https://openalex.org/I24185976","https://openalex.org/I4210125143"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100652603","display_name":"Yidan Zhang","orcid":"https://orcid.org/0000-0002-7589-530X"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]},{"id":"https://openalex.org/I4210125143","display_name":"Chengdu University","ror":"https://ror.org/034z67559","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210125143"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yidan Zhang","raw_affiliation_strings":["School of Computer Science, Sichuan University, Chengdu, China"],"raw_orcid":"https://orcid.org/0000-0002-7589-530X","affiliations":[{"raw_affiliation_string":"School of Computer Science, Sichuan University, Chengdu, China","institution_ids":["https://openalex.org/I24185976","https://openalex.org/I4210125143"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100447732","display_name":"Tingting Wang","orcid":"https://orcid.org/0000-0002-4912-7171"},"institutions":[{"id":"https://openalex.org/I82951845","display_name":"RMIT University","ror":"https://ror.org/04ttjf776","country_code":"AU","type":"education","lineage":["https://openalex.org/I82951845"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Tingting Wang","raw_affiliation_strings":["School of Computer Science &amp; IT, RMIT University, Melbourne, VIC, Australia"],"raw_orcid":"https://orcid.org/0000-0002-4912-7171","affiliations":[{"raw_affiliation_string":"School of Computer Science &amp; IT, RMIT University, Melbourne, VIC, Australia","institution_ids":["https://openalex.org/I82951845"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059759995","display_name":"Ruiqi Qin","orcid":"https://orcid.org/0000-0003-0102-9588"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Ruiqi Qin","raw_affiliation_strings":["SAP (China) Co., Ltd., Chengdu, China"],"raw_orcid":"https://orcid.org/0000-0003-0102-9588","affiliations":[{"raw_affiliation_string":"SAP (China) Co., Ltd., Chengdu, China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.07117515,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":96},"biblio":{"volume":"20","issue":"5","first_page":"2724","last_page":"2735"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.6877833604812622},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.6085540652275085},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5571482181549072},{"id":"https://openalex.org/keywords/semantic-similarity","display_name":"Semantic similarity","score":0.5524246096611023},{"id":"https://openalex.org/keywords/perspective","display_name":"Perspective (graphical)","score":0.4398570656776428},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.4262283146381378},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.40994611382484436},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.33953842520713806},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.26222604513168335},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.17520391941070557},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.17298784852027893},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.06958040595054626}],"concepts":[{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.6877833604812622},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.6085540652275085},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5571482181549072},{"id":"https://openalex.org/C130318100","wikidata":"https://www.wikidata.org/wiki/Q2268914","display_name":"Semantic similarity","level":2,"score":0.5524246096611023},{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.4398570656776428},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.4262283146381378},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.40994611382484436},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.33953842520713806},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.26222604513168335},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.17520391941070557},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.17298784852027893},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.06958040595054626},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1109/tcbb.2021.3110127","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2021.3110127","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34478379","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34478379","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null},{"id":"pmh:oai:figshare.com:article/27577056","is_oa":true,"landing_page_url":"https://figshare.com/articles/journal_contribution/An_Integrative_Disease_Information_Network_Approach_to_Similar_Disease_Detection/27577056","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:openaire/52505f7b-b0d9-4119-951c-31fbd8ff4a33","is_oa":true,"landing_page_url":"https://pure.ulster.ac.uk/en/publications/52505f7b-b0d9-4119-951c-31fbd8ff4a33","pdf_url":null,"source":{"id":"https://openalex.org/S4306402454","display_name":"Ulster University Research Portal (Ulster University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138801177","host_organization_name":"University of Ulster","host_organization_lineage":["https://openalex.org/I138801177"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Xu, W, Duan, L, Zheng, H, Li-Ling, J, Jiang, W, Zhang, Y, Wang, T & Qin, R 2021, 'An Integrative Disease Information Network Approach to Similar Disease detection', IEEE/ACM Transactions on Computational Biology and Bioinformatics, vol. 20, no. 5, pp. 1. https://doi.org/10.1109/TCBB.2021.3110127","raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:figshare.com:article/27577056","is_oa":true,"landing_page_url":"https://figshare.com/articles/journal_contribution/An_Integrative_Disease_Information_Network_Approach_to_Similar_Disease_Detection/27577056","pdf_url":null,"source":{"id":"https://openalex.org/S4377196282","display_name":"Figshare","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210132348","host_organization_name":"Figshare (United Kingdom)","host_organization_lineage":["https://openalex.org/I4210132348"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1498132315","display_name":"\u9762\u5411\u591a\u6e90\u65f6\u6001\u6570\u636e\u7684\u5f02\u5316\u5b50\u7a7a\u95f4\u6316\u6398\u7814\u7a76","funder_award_id":"61972268","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G551945883","display_name":null,"funder_award_id":"81473446","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W103340358","https://openalex.org/W115581746","https://openalex.org/W1517294127","https://openalex.org/W1880262756","https://openalex.org/W1984789788","https://openalex.org/W1995526759","https://openalex.org/W2041073071","https://openalex.org/W2054674225","https://openalex.org/W2108491719","https://openalex.org/W2128049108","https://openalex.org/W2134845483","https://openalex.org/W2143076797","https://openalex.org/W2146897752","https://openalex.org/W2159133583","https://openalex.org/W2168081408","https://openalex.org/W2354939339","https://openalex.org/W2505478609","https://openalex.org/W2516270479","https://openalex.org/W2792533056","https://openalex.org/W2809389329","https://openalex.org/W2899915536","https://openalex.org/W2901332105","https://openalex.org/W2906943923","https://openalex.org/W2916047525","https://openalex.org/W2945000764","https://openalex.org/W2950595506","https://openalex.org/W2962969117","https://openalex.org/W2963383024","https://openalex.org/W2974235162","https://openalex.org/W2974429973","https://openalex.org/W2983166786","https://openalex.org/W2995654955","https://openalex.org/W3027579288","https://openalex.org/W3043278204","https://openalex.org/W3124892619","https://openalex.org/W3126678729","https://openalex.org/W3128492988","https://openalex.org/W6608056421","https://openalex.org/W6611716644","https://openalex.org/W6636975626","https://openalex.org/W6677712588","https://openalex.org/W6682691769"],"related_works":["https://openalex.org/W2149537132","https://openalex.org/W1670566515","https://openalex.org/W641279757","https://openalex.org/W370975646","https://openalex.org/W596972243","https://openalex.org/W2380654781","https://openalex.org/W2114797768","https://openalex.org/W2176214140","https://openalex.org/W2516873349","https://openalex.org/W1990601549"],"abstract_inverted_index":{"Disease":[0],"similarity":[1,19,98],"analysis":[2],"impacts":[3],"significantly":[4],"in":[5,145],"pathogenesis":[6],"revealing,":[7],"treatment":[8],"recommending,":[9],"and":[10,84,109,143],"disease-causing":[11,35],"genes":[12],"predicting.":[13],"Previous":[14],"works":[15],"study":[16],"the":[17,22,32,80,88,96,102,114,119,128],"disease":[18,29,48,58,67,89,97,105,115,122,130,147],"based":[20,126],"on":[21,42,127,135],"semantics":[23],"obtaining":[24,47],"from":[25,101],"biomedical":[26,86],"ontologies":[27],"(e.g.,":[28],"ontology)":[30],"or":[31],"function":[33],"of":[34,104],"molecules.":[36],"However,":[37],"such":[38],"methods":[39],"almost":[40],"focus":[41],"a":[43,66],"single":[44],"perspective":[45],"for":[46,56,74],"features,":[49],"which":[50],"may":[51],"lead":[52],"to":[53],"biased":[54],"results":[55],"similar":[57,76,121,146],"detection.":[59,148],"To":[60],"address":[61],"this":[62],"issue,":[63],"we":[64],"propose":[65],"information":[68,90,116],"network-based":[69],"integrative":[70,129],"approach":[71],"named":[72],"MISSION":[73,140],"detecting":[75],"diseases.":[77],"By":[78],"leveraging":[79],"associations":[81],"between":[82],"diseases":[83],"other":[85],"entities,":[87],"network":[91],"is":[92,124,141],"established":[93],"first.":[94],"Then,":[95],"features":[99],"extracted":[100],"aspects":[103],"taxonomy,":[106],"attributes,":[107],"literature,":[108],"annotations":[110],"are":[111],"integrated":[112],"into":[113],"network.":[117],"Finally,":[118],"top-k":[120],"query":[123],"performed":[125],"information.":[131],"The":[132],"experiments":[133],"conducted":[134],"real-world":[136],"datasets":[137],"demonstrate":[138],"that":[139],"effective":[142],"useful":[144]},"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
