{"id":"https://openalex.org/W3185225911","doi":"https://doi.org/10.1109/tcbb.2021.3098126","title":"MCA-Net: Multi-Feature Coding and Attention Convolutional Neural Network for Predicting lncRNA-Disease Association","display_name":"MCA-Net: Multi-Feature Coding and Attention Convolutional Neural Network for Predicting lncRNA-Disease Association","publication_year":2021,"publication_date":"2021-07-20","ids":{"openalex":"https://openalex.org/W3185225911","doi":"https://doi.org/10.1109/tcbb.2021.3098126","mag":"3185225911","pmid":"https://pubmed.ncbi.nlm.nih.gov/34283719"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2021.3098126","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2021.3098126","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100368734","display_name":"Yuan Zhang","orcid":"https://orcid.org/0000-0002-8019-7944"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuan Zhang","raw_affiliation_strings":["Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, China"],"raw_orcid":"https://orcid.org/0000-0002-8019-7944","affiliations":[{"raw_affiliation_string":"Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100357209","display_name":"Fei Ye","orcid":"https://orcid.org/0000-0001-9512-3625"},"institutions":[{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fei Ye","raw_affiliation_strings":["Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, China"],"raw_orcid":"https://orcid.org/0000-0001-9512-3625","affiliations":[{"raw_affiliation_string":"Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, China","institution_ids":["https://openalex.org/I4610292"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010870600","display_name":"Xieping Gao","orcid":"https://orcid.org/0000-0002-7764-3616"},"institutions":[{"id":"https://openalex.org/I43081956","display_name":"Xiangnan University","ror":"https://ror.org/05by9mg64","country_code":"CN","type":"education","lineage":["https://openalex.org/I43081956"]},{"id":"https://openalex.org/I4610292","display_name":"Xiangtan University","ror":"https://ror.org/00xsfaz62","country_code":"CN","type":"education","lineage":["https://openalex.org/I4610292"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xieping Gao","raw_affiliation_strings":["Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, China","Key Laboratory of Medical Imaging and Artifical Intelligence of Hunan Province, Xiangnan University, Chenzhou, China"],"raw_orcid":"https://orcid.org/0000-0002-7764-3616","affiliations":[{"raw_affiliation_string":"Key Laboratory of Intelligent Computing and Information Processing of Ministry of Education, Xiangtan University, Xiangtan, China","institution_ids":["https://openalex.org/I4610292"]},{"raw_affiliation_string":"Key Laboratory of Medical Imaging and Artifical Intelligence of Hunan Province, Xiangnan University, Chenzhou, China","institution_ids":["https://openalex.org/I43081956"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.1028,"has_fulltext":false,"cited_by_count":21,"citation_normalized_percentile":{"value":0.73852616,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"19","issue":"5","first_page":"2907","last_page":"2919"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.7812536954879761},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7319595217704773},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6335723400115967},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5757336020469666},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5455105900764465},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.4910259246826172},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.48256292939186096},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.47529280185699463},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4670514166355133},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.43455034494400024},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.32763028144836426},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.08821013569831848},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.0696331262588501}],"concepts":[{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.7812536954879761},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7319595217704773},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6335723400115967},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5757336020469666},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5455105900764465},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.4910259246826172},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.48256292939186096},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.47529280185699463},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4670514166355133},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.43455034494400024},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.32763028144836426},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.08821013569831848},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0696331262588501},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2021.3098126","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2021.3098126","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34283719","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34283719","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.75}],"awards":[{"id":"https://openalex.org/G1339473012","display_name":"\u9762\u5411\u80bf\u7624\u7cbe\u51c6\u8bca\u65ad\u7684\u75c5\u7406\u56fe\u50cf\u5b9a\u91cf\u5206\u6790\u7814\u7a76","funder_award_id":"61972333","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2672142798","display_name":null,"funder_award_id":"61802328","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3497966262","display_name":"\u4efb\u610f\u7ef4CDF97\u578b\u6ee4\u6ce2\u5668\u7ec4\u7684\u683c\u578b\u7ed3\u6784\u8bbe\u8ba1\u7814\u7a76","funder_award_id":"61771415","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8879139198","display_name":null,"funder_award_id":"2019JJ50606","funder_id":"https://openalex.org/F4320322843","funder_display_name":"Natural Science Foundation of\u00a0Hunan Province"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322843","display_name":"Natural Science Foundation of\u00a0Hunan Province","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":76,"referenced_works":["https://openalex.org/W251358359","https://openalex.org/W302823870","https://openalex.org/W611910056","https://openalex.org/W1158178075","https://openalex.org/W1963592300","https://openalex.org/W1967102258","https://openalex.org/W2008491586","https://openalex.org/W2039816251","https://openalex.org/W2049621625","https://openalex.org/W2054841768","https://openalex.org/W2059795285","https://openalex.org/W2060430981","https://openalex.org/W2073055866","https://openalex.org/W2085971867","https://openalex.org/W2102304447","https://openalex.org/W2105192691","https://openalex.org/W2106787323","https://openalex.org/W2110957978","https://openalex.org/W2111479290","https://openalex.org/W2112796928","https://openalex.org/W2113868616","https://openalex.org/W2116168949","https://openalex.org/W2119043602","https://openalex.org/W2128983843","https://openalex.org/W2152970345","https://openalex.org/W2345181615","https://openalex.org/W2408796111","https://openalex.org/W2531500048","https://openalex.org/W2538882679","https://openalex.org/W2571471366","https://openalex.org/W2575260040","https://openalex.org/W2592189645","https://openalex.org/W2599192953","https://openalex.org/W2602602940","https://openalex.org/W2730472814","https://openalex.org/W2734400094","https://openalex.org/W2740189552","https://openalex.org/W2763023272","https://openalex.org/W2766935102","https://openalex.org/W2772618228","https://openalex.org/W2787946513","https://openalex.org/W2799979276","https://openalex.org/W2801013643","https://openalex.org/W2802616725","https://openalex.org/W2891866117","https://openalex.org/W2895679848","https://openalex.org/W2897174088","https://openalex.org/W2898736938","https://openalex.org/W2910795786","https://openalex.org/W2918193787","https://openalex.org/W2931885496","https://openalex.org/W2940891808","https://openalex.org/W2942122135","https://openalex.org/W2942942195","https://openalex.org/W2951392351","https://openalex.org/W2962049406","https://openalex.org/W2966083270","https://openalex.org/W2967521176","https://openalex.org/W2968308583","https://openalex.org/W2969761002","https://openalex.org/W2970249540","https://openalex.org/W2971132843","https://openalex.org/W2972582951","https://openalex.org/W2990265059","https://openalex.org/W3000503908","https://openalex.org/W3013787003","https://openalex.org/W3014726572","https://openalex.org/W3017583060","https://openalex.org/W3027711990","https://openalex.org/W3028590990","https://openalex.org/W3082139797","https://openalex.org/W3099929518","https://openalex.org/W3117426525","https://openalex.org/W6609324540","https://openalex.org/W6610687998","https://openalex.org/W6684191040"],"related_works":["https://openalex.org/W4293226380","https://openalex.org/W4375867731","https://openalex.org/W2611989081","https://openalex.org/W4313906399","https://openalex.org/W4226493464","https://openalex.org/W4312417841","https://openalex.org/W3193565141","https://openalex.org/W3133861977","https://openalex.org/W3167935049","https://openalex.org/W3029198973"],"abstract_inverted_index":{"With":[0],"the":[1,4,15,80,89,111,119,122,130,160,185],"advent":[2],"of":[3,6,65,83,113,121,132],"era":[5],"big":[7],"data,":[8],"it":[9],"is":[10,76,99,180],"troublesome":[11],"to":[12,27,61,78,101],"accurately":[13],"predict":[14],"associations":[16,45,104],"between":[17],"lncRNAs":[18],"and":[19,30,49,67,129,151,173,182],"diseases":[20],"based":[21],"on":[22,143,163,170],"traditional":[23],"biological":[24],"experiments":[25],"due":[26],"its":[28],"time-consuming":[29],"subjective.":[31],"In":[32],"this":[33],"paper,":[34],"we":[35,109],"propose":[36],"a":[37,72],"novel":[38],"deep":[39,126],"learning":[40,127],"method":[41,75],"for":[42,184],"predicting":[43],"lncRNA-disease":[44,84,103,186],"using":[46],"multi-feature":[47,73],"coding":[48,74],"attention":[50,95,133],"convolutional":[51,96],"neural":[52,97],"network":[53,98],"(MCA-Net).":[54],"We":[55,135],"first":[56],"calculate":[57],"six":[58,90],"similarity":[59,91],"features":[60],"extract":[62],"different":[63,116],"types":[64],"lncRNA":[66],"disease":[68],"feature":[69,81],"information.":[70],"Second,":[71],"proposed":[77],"construct":[79],"vectors":[82],"association":[85,187],"samples":[86],"by":[87],"integrating":[88],"features.":[92],"Furthermore,":[93],"an":[94],"developed":[100],"identify":[102],"under":[105],"10-fold":[106],"cross-validation.":[107],"Finally,":[108],"evaluate":[110],"performance":[112],"MCA-Net":[114,138,158,179],"from":[115],"perspectives":[117],"including":[118],"effects":[120],"model":[123],"parameters,":[124],"distinct":[125],"models,":[128],"necessity":[131],"mechanism.":[134],"also":[136],"compare":[137],"with":[139],"several":[140],"state-of-the-art":[141,161],"methods":[142,162],"three":[144,165],"publicly":[145],"available":[146],"datasets,":[147],"i.e.,":[148],"LncRNADisease,":[149],"Lnc2Cancer,":[150],"LncRNADisease2.0.":[152],"The":[153],"results":[154],"show":[155],"that":[156,178],"our":[157],"outperforms":[159],"all":[164],"dataset.":[166],"Besides,":[167],"case":[168],"studies":[169],"breast":[171],"cancer":[172,175],"lung":[174],"further":[176],"verify":[177],"effective":[181],"accurate":[183],"prediction.":[188]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1}],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2025-10-10T00:00:00"}
