{"id":"https://openalex.org/W3127210636","doi":"https://doi.org/10.1109/tcbb.2021.3059046","title":"A Dual Ranking Algorithm Based on the Multiplex Network for Heterogeneous Complex Disease Analysis","display_name":"A Dual Ranking Algorithm Based on the Multiplex Network for Heterogeneous Complex Disease Analysis","publication_year":2021,"publication_date":"2021-02-12","ids":{"openalex":"https://openalex.org/W3127210636","doi":"https://doi.org/10.1109/tcbb.2021.3059046","mag":"3127210636","pmid":"https://pubmed.ncbi.nlm.nih.gov/33577455"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2021.3059046","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2021.3059046","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100687807","display_name":"Xingyi Li","orcid":"https://orcid.org/0000-0002-6004-4174"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xingyi Li","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, Hunan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, Hunan, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046328933","display_name":"Ju Xiang","orcid":"https://orcid.org/0000-0002-3045-5706"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ju Xiang","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, Hunan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, Hunan, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091157395","display_name":"Fang\u2010Xiang Wu","orcid":"https://orcid.org/0000-0002-4593-9332"},"institutions":[{"id":"https://openalex.org/I32625721","display_name":"University of Saskatchewan","ror":"https://ror.org/010x8gc63","country_code":"CA","type":"education","lineage":["https://openalex.org/I32625721"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Fang-Xiang Wu","raw_affiliation_strings":["Division of Biomedical Engineering and Department of Mechanical Engineering, University of Saskatchewan, Saskatoon, Canada"],"affiliations":[{"raw_affiliation_string":"Division of Biomedical Engineering and Department of Mechanical Engineering, University of Saskatchewan, Saskatoon, Canada","institution_ids":["https://openalex.org/I32625721"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100719013","display_name":"Min Li","orcid":"https://orcid.org/0000-0002-0188-1394"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Min Li","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, Hunan, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, Hunan, China","institution_ids":["https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100687807"],"corresponding_institution_ids":["https://openalex.org/I139660479"],"apc_list":null,"apc_paid":null,"fwci":0.4058,"has_fulltext":false,"cited_by_count":25,"citation_normalized_percentile":{"value":0.57936102,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"19","issue":"4","first_page":"1993","last_page":"2002"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9937000274658203,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.8536806106567383},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6544018387794495},{"id":"https://openalex.org/keywords/heterogeneous-network","display_name":"Heterogeneous network","score":0.6429020166397095},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.6295773386955261},{"id":"https://openalex.org/keywords/multiplex","display_name":"Multiplex","score":0.5600059032440186},{"id":"https://openalex.org/keywords/dual","display_name":"Dual (grammatical number)","score":0.5125872492790222},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5028759837150574},{"id":"https://openalex.org/keywords/network-analysis","display_name":"Network analysis","score":0.4975889027118683},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.49403053522109985},{"id":"https://openalex.org/keywords/network-topology","display_name":"Network topology","score":0.478908896446228},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4395972192287445},{"id":"https://openalex.org/keywords/complex-network","display_name":"Complex network","score":0.41376328468322754},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4103177785873413},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3688807189464569},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.24461206793785095},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14627030491828918},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.09054362773895264},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.08043280243873596}],"concepts":[{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.8536806106567383},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6544018387794495},{"id":"https://openalex.org/C158207573","wikidata":"https://www.wikidata.org/wiki/Q5747224","display_name":"Heterogeneous network","level":4,"score":0.6429020166397095},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.6295773386955261},{"id":"https://openalex.org/C2781188995","wikidata":"https://www.wikidata.org/wiki/Q6934982","display_name":"Multiplex","level":2,"score":0.5600059032440186},{"id":"https://openalex.org/C2780980858","wikidata":"https://www.wikidata.org/wiki/Q110022","display_name":"Dual (grammatical number)","level":2,"score":0.5125872492790222},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5028759837150574},{"id":"https://openalex.org/C32946077","wikidata":"https://www.wikidata.org/wiki/Q618079","display_name":"Network analysis","level":2,"score":0.4975889027118683},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.49403053522109985},{"id":"https://openalex.org/C199845137","wikidata":"https://www.wikidata.org/wiki/Q145490","display_name":"Network topology","level":2,"score":0.478908896446228},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4395972192287445},{"id":"https://openalex.org/C34947359","wikidata":"https://www.wikidata.org/wiki/Q665189","display_name":"Complex network","level":2,"score":0.41376328468322754},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4103177785873413},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3688807189464569},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.24461206793785095},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14627030491828918},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.09054362773895264},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.08043280243873596},{"id":"https://openalex.org/C108037233","wikidata":"https://www.wikidata.org/wiki/Q11375","display_name":"Wireless network","level":3,"score":0.0},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0},{"id":"https://openalex.org/C124952713","wikidata":"https://www.wikidata.org/wiki/Q8242","display_name":"Literature","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2021.3059046","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2021.3059046","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33577455","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33577455","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","score":0.7400000095367432,"display_name":"Reduced inequalities"}],"awards":[{"id":"https://openalex.org/G5131139713","display_name":null,"funder_award_id":"CX20190123","funder_id":"https://openalex.org/F4320326217","funder_display_name":"Hunan Provincial Innovation Foundation for Postgraduate"},{"id":"https://openalex.org/G8693918016","display_name":null,"funder_award_id":"kq2009093","funder_id":"https://openalex.org/F4320336634","funder_display_name":"Training Program for Excellent Young Innovators of Changsha"}],"funders":[{"id":"https://openalex.org/F4320326217","display_name":"Hunan Provincial Innovation Foundation for Postgraduate","ror":null},{"id":"https://openalex.org/F4320336634","display_name":"Training Program for Excellent Young Innovators of Changsha","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":60,"referenced_works":["https://openalex.org/W1854214752","https://openalex.org/W1892363833","https://openalex.org/W1965302838","https://openalex.org/W1973872989","https://openalex.org/W1994803330","https://openalex.org/W2007534521","https://openalex.org/W2009019945","https://openalex.org/W2009710456","https://openalex.org/W2009720434","https://openalex.org/W2010707723","https://openalex.org/W2020040634","https://openalex.org/W2020541351","https://openalex.org/W2024679195","https://openalex.org/W2034400748","https://openalex.org/W2038122249","https://openalex.org/W2041993682","https://openalex.org/W2050766178","https://openalex.org/W2051923123","https://openalex.org/W2053992818","https://openalex.org/W2056025993","https://openalex.org/W2056782561","https://openalex.org/W2067305633","https://openalex.org/W2067803871","https://openalex.org/W2081375228","https://openalex.org/W2086243891","https://openalex.org/W2095867585","https://openalex.org/W2096781310","https://openalex.org/W2099610622","https://openalex.org/W2101181377","https://openalex.org/W2108371618","https://openalex.org/W2112492259","https://openalex.org/W2119220491","https://openalex.org/W2122863289","https://openalex.org/W2148043260","https://openalex.org/W2156166905","https://openalex.org/W2160450758","https://openalex.org/W2165253681","https://openalex.org/W2166898290","https://openalex.org/W2537679995","https://openalex.org/W2570396690","https://openalex.org/W2583706707","https://openalex.org/W2615110909","https://openalex.org/W2624701078","https://openalex.org/W2740528188","https://openalex.org/W2743400982","https://openalex.org/W2750770743","https://openalex.org/W2800948866","https://openalex.org/W2912198494","https://openalex.org/W2915108429","https://openalex.org/W2915554882","https://openalex.org/W2916479752","https://openalex.org/W2920876032","https://openalex.org/W2951531839","https://openalex.org/W3004474617","https://openalex.org/W3004579494","https://openalex.org/W3006386970","https://openalex.org/W4235025907","https://openalex.org/W4255365317","https://openalex.org/W4297820745","https://openalex.org/W6759243761"],"related_works":["https://openalex.org/W2070704205","https://openalex.org/W2353485001","https://openalex.org/W2901655697","https://openalex.org/W2979634341","https://openalex.org/W1525985997","https://openalex.org/W2394794438","https://openalex.org/W118100147","https://openalex.org/W2727283706","https://openalex.org/W108107911","https://openalex.org/W2161626927"],"abstract_inverted_index":{"Identifying":[0],"biomarkers":[1,111,169],"of":[2,10,53,59,63,80,92,104,120],"heterogeneous":[3,140,150],"complex":[4,141,151],"diseases":[5,152],"has":[6],"always":[7],"been":[8,25],"one":[9],"the":[11,19,51,54,57,87,100,118,146,171],"focuses":[12],"in":[13,113],"medical":[14],"research.":[15],"In":[16,127],"previous":[17],"studies,":[18],"powerful":[20],"network":[21,55,85,107],"propagation":[22],"methods":[23,37,74,165],"have":[24,86,117],"applied":[26,145],"to":[27,32,149],"finding":[28],"marker":[29],"genes":[30],"related":[31],"specific":[33],"diseases,":[34],"but":[35],"existing":[36],"are":[38,108],"mostly":[39],"based":[40],"on":[41],"a":[42,60,132],"single":[43],"network,":[44],"which":[45],"may":[46,94],"be":[47],"greatly":[48],"affected":[49],"by":[50],"incompleteness":[52],"and":[56,67,99,102,123,156,166,181],"ignorance":[58],"large":[61],"amount":[62],"information":[64],"about":[65],"physical":[66],"functional":[68],"interactions":[69,81],"between":[70],"biological":[71,182],"components.":[72],"Other":[73],"that":[75,89,161],"directly":[76],"integrate":[77],"multiple":[78],"types":[79,91],"into":[82],"an":[83],"aggregate":[84],"risks":[88],"different":[90],"data":[93],"conflict":[95],"with":[96,170],"each":[97,105],"other":[98],"characteristics":[101,119],"topologies":[103],"individual":[106],"lost.":[109],"Meanwhile,":[110],"used":[112],"clinical":[114],"trials":[115],"should":[116],"small":[121,172],"quantity":[122],"strong":[124],"discriminate":[125],"ability.":[126],"this":[128],"study,":[129],"we":[130],"developed":[131],"multiplex":[133],"network-based":[134],"dual":[135],"ranking":[136],"framework":[137],"(DualRank)":[138],"for":[139,153],"disease":[142],"analysis.":[143],"We":[144],"proposed":[147],"method":[148],"diagnosis,":[154],"prognosis,":[155],"classification.":[157],"The":[158],"results":[159],"showed":[160],"DualRank":[162],"outperformed":[163],"competing":[164],"could":[167],"identify":[168],"quantity,":[173],"great":[174],"prediction":[175],"performance":[176],"(average":[177],"AUC":[178],"=":[179],"0.818)":[180],"interpretability.":[183]},"counts_by_year":[{"year":2026,"cited_by_count":12},{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-03-25T14:56:36.534964","created_date":"2025-10-10T00:00:00"}
