{"id":"https://openalex.org/W3111103775","doi":"https://doi.org/10.1109/tcbb.2020.3037136","title":"High-Throughput Screening and Quantum Mechanics for Identifying Potent Inhibitors Against Mac1 Domain of SARS-CoV-2 Nsp3","display_name":"High-Throughput Screening and Quantum Mechanics for Identifying Potent Inhibitors Against Mac1 Domain of SARS-CoV-2 Nsp3","publication_year":2020,"publication_date":"2020-12-11","ids":{"openalex":"https://openalex.org/W3111103775","doi":"https://doi.org/10.1109/tcbb.2020.3037136","mag":"3111103775","pmid":"https://pubmed.ncbi.nlm.nih.gov/33306471"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2020.3037136","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tcbb.2020.3037136","pdf_url":"https://ieeexplore.ieee.org/ielx7/8857/9508625/09291403.pdf","source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"bronze","oa_url":"https://ieeexplore.ieee.org/ielx7/8857/9508625/09291403.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016686816","display_name":"Chandrabose Selvaraj","orcid":"https://orcid.org/0000-0002-8115-0486"},"institutions":[{"id":"https://openalex.org/I131155284","display_name":"Alagappa University","ror":"https://ror.org/04ec9cc06","country_code":"IN","type":"education","lineage":["https://openalex.org/I131155284"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Chandrabose Selvaraj","raw_affiliation_strings":["Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India","institution_ids":["https://openalex.org/I131155284"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079887198","display_name":"Dhurvas Chandrasekaran Dinesh","orcid":"https://orcid.org/0000-0001-9125-4775"},"institutions":[{"id":"https://openalex.org/I4210145889","display_name":"Czech Academy of Sciences, Institute of Organic Chemistry and Biochemistry","ror":"https://ror.org/04nfjn472","country_code":"CZ","type":"facility","lineage":["https://openalex.org/I202391551","https://openalex.org/I4210145889"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Dhurvas Chandrasekaran Dinesh","raw_affiliation_strings":["Institute of Organic Chemistry and Biochemistry AS CR, Prague, Czechia"],"affiliations":[{"raw_affiliation_string":"Institute of Organic Chemistry and Biochemistry AS CR, Prague, Czechia","institution_ids":["https://openalex.org/I4210145889"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029236328","display_name":"Umesh Panwar","orcid":"https://orcid.org/0000-0001-7777-7174"},"institutions":[{"id":"https://openalex.org/I131155284","display_name":"Alagappa University","ror":"https://ror.org/04ec9cc06","country_code":"IN","type":"education","lineage":["https://openalex.org/I131155284"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Umesh Panwar","raw_affiliation_strings":["Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India","institution_ids":["https://openalex.org/I131155284"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074477903","display_name":"Ev\u017een Bou\u0159a","orcid":"https://orcid.org/0000-0002-9652-4065"},"institutions":[{"id":"https://openalex.org/I4210145889","display_name":"Czech Academy of Sciences, Institute of Organic Chemistry and Biochemistry","ror":"https://ror.org/04nfjn472","country_code":"CZ","type":"facility","lineage":["https://openalex.org/I202391551","https://openalex.org/I4210145889"]}],"countries":["CZ"],"is_corresponding":false,"raw_author_name":"Evzen Boura","raw_affiliation_strings":["Institute of Organic Chemistry and Biochemistry AS CR, Prague, Czechia"],"affiliations":[{"raw_affiliation_string":"Institute of Organic Chemistry and Biochemistry AS CR, Prague, Czechia","institution_ids":["https://openalex.org/I4210145889"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5054825291","display_name":"Sanjeev Kumar Singh","orcid":"https://orcid.org/0000-0003-4153-6437"},"institutions":[{"id":"https://openalex.org/I131155284","display_name":"Alagappa University","ror":"https://ror.org/04ec9cc06","country_code":"IN","type":"education","lineage":["https://openalex.org/I131155284"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Sanjeev Kumar Singh","raw_affiliation_strings":["Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Alagappa University, Karaikudi, Tamil Nadu, India","institution_ids":["https://openalex.org/I131155284"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5016686816"],"corresponding_institution_ids":["https://openalex.org/I131155284"],"apc_list":null,"apc_paid":null,"fwci":1.8366,"has_fulltext":true,"cited_by_count":25,"citation_normalized_percentile":{"value":0.88110933,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"18","issue":"4","first_page":"1262","last_page":"1270"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11914","display_name":"PARP inhibition in cancer therapy","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11914","display_name":"PARP inhibition in cancer therapy","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10118","display_name":"SARS-CoV-2 and COVID-19 Research","score":0.9886999726295471,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9840999841690063,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.621281087398529},{"id":"https://openalex.org/keywords/binding-site","display_name":"Binding site","score":0.5367805361747742},{"id":"https://openalex.org/keywords/plasma-protein-binding","display_name":"Plasma protein binding","score":0.49356138706207275},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.4528645873069763},{"id":"https://openalex.org/keywords/binding-pocket","display_name":"Binding pocket","score":0.4374775290489197},{"id":"https://openalex.org/keywords/substrate","display_name":"Substrate (aquarium)","score":0.4346785247325897},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3842158317565918},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.38002192974090576},{"id":"https://openalex.org/keywords/biophysics","display_name":"Biophysics","score":0.36930710077285767},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.20842018723487854},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.0783613920211792}],"concepts":[{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.621281087398529},{"id":"https://openalex.org/C107824862","wikidata":"https://www.wikidata.org/wiki/Q616005","display_name":"Binding site","level":2,"score":0.5367805361747742},{"id":"https://openalex.org/C51639874","wikidata":"https://www.wikidata.org/wiki/Q167149","display_name":"Plasma protein binding","level":2,"score":0.49356138706207275},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.4528645873069763},{"id":"https://openalex.org/C3020299119","wikidata":"https://www.wikidata.org/wiki/Q423026","display_name":"Binding pocket","level":3,"score":0.4374775290489197},{"id":"https://openalex.org/C2777289219","wikidata":"https://www.wikidata.org/wiki/Q7632154","display_name":"Substrate (aquarium)","level":2,"score":0.4346785247325897},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3842158317565918},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.38002192974090576},{"id":"https://openalex.org/C12554922","wikidata":"https://www.wikidata.org/wiki/Q7100","display_name":"Biophysics","level":1,"score":0.36930710077285767},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.20842018723487854},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0783613920211792},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D000086882","descriptor_name":"Coronavirus Papain-Like Proteases","qualifier_ui":"Q000037","qualifier_name":"antagonists & inhibitors","is_major_topic":false},{"descriptor_ui":"D000086882","descriptor_name":"Coronavirus Papain-Like Proteases","qualifier_ui":"Q000037","qualifier_name":"antagonists & inhibitors","is_major_topic":false},{"descriptor_ui":"D000086882","descriptor_name":"Coronavirus Papain-Like Proteases","qualifier_ui":"Q000037","qualifier_name":"antagonists & inhibitors","is_major_topic":false},{"descriptor_ui":"D000086882","descriptor_name":"Coronavirus Papain-Like Proteases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086882","descriptor_name":"Coronavirus Papain-Like Proteases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086882","descriptor_name":"Coronavirus Papain-Like Proteases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000086882","descriptor_name":"Coronavirus Papain-Like Proteases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000086882","descriptor_name":"Coronavirus Papain-Like Proteases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000086882","descriptor_name":"Coronavirus Papain-Like Proteases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000093485","descriptor_name":"COVID-19 Drug Treatment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000093485","descriptor_name":"COVID-19 Drug Treatment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000093485","descriptor_name":"COVID-19 Drug Treatment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000246","descriptor_name":"Adenosine Diphosphate Ribose","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000246","descriptor_name":"Adenosine Diphosphate Ribose","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000246","descriptor_name":"Adenosine Diphosphate Ribose","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011789","descriptor_name":"Quantum Theory","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011789","descriptor_name":"Quantum Theory","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011789","descriptor_name":"Quantum Theory","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D057166","descriptor_name":"High-Throughput Screening Assays","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1109/tcbb.2020.3037136","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tcbb.2020.3037136","pdf_url":"https://ieeexplore.ieee.org/ielx7/8857/9508625/09291403.pdf","source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33306471","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33306471","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8769010","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8769010","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE/ACM Trans Comput Biol Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1109/tcbb.2020.3037136","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tcbb.2020.3037136","pdf_url":"https://ieeexplore.ieee.org/ielx7/8857/9508625/09291403.pdf","source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.7300000190734863,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320322482","display_name":"Akademie V\u011bd \u010cesk\u00e9 Republiky","ror":"https://ror.org/053avzc18"},{"id":"https://openalex.org/F4320335322","display_name":"European Regional Development Fund","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3111103775.pdf","grobid_xml":"https://content.openalex.org/works/W3111103775.grobid-xml"},"referenced_works_count":52,"referenced_works":["https://openalex.org/W797622151","https://openalex.org/W1566763301","https://openalex.org/W1966078827","https://openalex.org/W2000387332","https://openalex.org/W2004343588","https://openalex.org/W2010233441","https://openalex.org/W2019184993","https://openalex.org/W2027036980","https://openalex.org/W2033994061","https://openalex.org/W2050150242","https://openalex.org/W2053536761","https://openalex.org/W2054743669","https://openalex.org/W2056022472","https://openalex.org/W2063090250","https://openalex.org/W2063348943","https://openalex.org/W2066536058","https://openalex.org/W2067852761","https://openalex.org/W2086779432","https://openalex.org/W2100593398","https://openalex.org/W2103037377","https://openalex.org/W2108535530","https://openalex.org/W2119065139","https://openalex.org/W2150267214","https://openalex.org/W2163279093","https://openalex.org/W2168974130","https://openalex.org/W2171268876","https://openalex.org/W2217204947","https://openalex.org/W2257005270","https://openalex.org/W2403769980","https://openalex.org/W2491014331","https://openalex.org/W2532189500","https://openalex.org/W2749555747","https://openalex.org/W2753698002","https://openalex.org/W2768064447","https://openalex.org/W2777809190","https://openalex.org/W2790356379","https://openalex.org/W2890577408","https://openalex.org/W2935042319","https://openalex.org/W2937687122","https://openalex.org/W2944980314","https://openalex.org/W2973917566","https://openalex.org/W2974230186","https://openalex.org/W2978641965","https://openalex.org/W2980654983","https://openalex.org/W2995563458","https://openalex.org/W3000299205","https://openalex.org/W3004896487","https://openalex.org/W3011176674","https://openalex.org/W3011631576","https://openalex.org/W3014342792","https://openalex.org/W3015101246","https://openalex.org/W3026051701"],"related_works":["https://openalex.org/W2170354954","https://openalex.org/W1964547127","https://openalex.org/W2951841761","https://openalex.org/W2006905684","https://openalex.org/W2068170225","https://openalex.org/W3134762652","https://openalex.org/W2797856818","https://openalex.org/W1995289937","https://openalex.org/W2620864330","https://openalex.org/W2407113773"],"abstract_inverted_index":{"SARS-CoV-2":[0,74],"encodes":[1],"the":[2,6,33,64,68,127,144,152,159,172,176,197],"Mac1":[3,25,58,75,103],"domain":[4,104],"within":[5],"large":[7,110],"nonstructural":[8],"protein":[9],"3":[10],"(Nsp3),":[11],"which":[12,48],"has":[13],"an":[14,28,80],"ADP-ribosylhydrolase":[15],"activity":[16,23,94],"conserved":[17,61],"in":[18,43,63,143],"other":[19],"coronaviruses.":[20],"The":[21],"enzymatic":[22],"of":[24,35,52,102,112,166,200],"makes":[26,171],"it":[27],"essential":[29],"virulence":[30],"factor":[31],"for":[32,67,107],"pathogenicity":[34],"coronavirus":[36],"(CoV).":[37],"They":[38],"have":[39,138],"a":[40,91],"regulatory":[41],"role":[42],"counteracting":[44],"host-mediated":[45],"antiviral":[46,93],"ADP-ribosylation,":[47],"is":[49,77,105],"unique":[50],"part":[51],"host":[53],"response":[54],"towards":[55],"viral":[56],"infections.":[57],"shows":[59,182],"highly":[60],"residues":[62],"binding":[65,128,150,177,180,194],"pocket":[66],"mono":[69],"and":[70,84,116,136,161,169,185],"poly":[71],"ADP-ribose.":[72],"Therefore,":[73],"enzyme":[76],"considered":[78,106],"as":[79],"ideal":[81],"drug":[82],"target":[83],"inhibitors":[85],"developed":[86],"against":[87,95],"them":[88],"can":[89],"possess":[90],"broad":[92],"CoV.":[96],"ADP-ribose-1":[97],"phosphate":[98],"bound":[99],"closed":[100,198],"form":[101,199],"screening":[108],"with":[109,192],"database":[111],"ZINC.":[113],"XP":[114],"docking":[115],"QPLD":[117],"provides":[118],"strong":[119],"potential":[120],"lead":[121,163,186],"compounds,":[122],"that":[123,147],"perfectly":[124],"fits":[125],"inside":[126,151,175,196],"pocket.":[129,154,178],"Quantum":[130],"mechanical":[131],"studies":[132],"expose":[133],"that,":[134],"substrate":[135,160,184],"leads":[137],"similar":[139,193],"electron":[140,167],"donor":[141,168],"ability":[142],"head":[145],"regions,":[146],"allocates":[148],"tight":[149,174],"substrate-binding":[153],"Molecular":[155],"dynamics":[156],"study":[157],"confirms":[158],"new":[162],"molecules":[164,187],"presence":[165],"acceptor":[170],"interactions":[173],"Overall":[179],"phenomenon":[181],"both":[183],"are":[188],"well-adopt":[189],"to":[190],"bind":[191],"mode":[195],"Mac1.":[201]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":10}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2020-12-21T00:00:00"}
