{"id":"https://openalex.org/W3006134970","doi":"https://doi.org/10.1109/tcbb.2020.3008196","title":"Personalized Metabolic Analysis of Diseases","display_name":"Personalized Metabolic Analysis of Diseases","publication_year":2020,"publication_date":"2020-07-09","ids":{"openalex":"https://openalex.org/W3006134970","doi":"https://doi.org/10.1109/tcbb.2020.3008196","mag":"3006134970","pmid":"https://pubmed.ncbi.nlm.nih.gov/32750887"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2020.3008196","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2020.3008196","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"preprint","indexed_in":["arxiv","crossref","datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2002.04078","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035836413","display_name":"Ali Cakmak","orcid":"https://orcid.org/0000-0002-1382-6130"},"institutions":[{"id":"https://openalex.org/I48912391","display_name":"Istanbul Technical University","ror":"https://ror.org/059636586","country_code":"TR","type":"education","lineage":["https://openalex.org/I48912391"]}],"countries":["TR"],"is_corresponding":true,"raw_author_name":"Ali Cakmak","raw_affiliation_strings":["Department of Computer Engineering, Istanbul Technical University, Maslak, Istanbul, Turkey"],"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering, Istanbul Technical University, Maslak, Istanbul, Turkey","institution_ids":["https://openalex.org/I48912391"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5104025914","display_name":"M. Hasan Celik","orcid":null},"institutions":[{"id":"https://openalex.org/I13419840","display_name":"Istanbul \u015eehir University","ror":"https://ror.org/020ddy191","country_code":"TR","type":"education","lineage":["https://openalex.org/I13419840"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"M. Hasan Celik","raw_affiliation_strings":["Department of Computer Science and Engineering, Istanbul Sehir University, Dragos, Istanbul, Turkey"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Istanbul Sehir University, Dragos, Istanbul, Turkey","institution_ids":["https://openalex.org/I13419840"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5035836413"],"corresponding_institution_ids":["https://openalex.org/I48912391"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.01339091,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"18","issue":"3","first_page":"1014","last_page":"1025"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.6619651317596436},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.6117460131645203},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.5842185616493225},{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.5558381080627441},{"id":"https://openalex.org/keywords/colorectal-cancer","display_name":"Colorectal cancer","score":0.5102901458740234},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4542139768600464},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4314674437046051},{"id":"https://openalex.org/keywords/complex-disease","display_name":"Complex disease","score":0.41933026909828186},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4085604250431061},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4006291329860687},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3698870539665222},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23632395267486572},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.22471171617507935}],"concepts":[{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.6619651317596436},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.6117460131645203},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.5842185616493225},{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.5558381080627441},{"id":"https://openalex.org/C526805850","wikidata":"https://www.wikidata.org/wiki/Q188874","display_name":"Colorectal cancer","level":3,"score":0.5102901458740234},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4542139768600464},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4314674437046051},{"id":"https://openalex.org/C3018605307","wikidata":"https://www.wikidata.org/wiki/Q200779","display_name":"Complex disease","level":3,"score":0.41933026909828186},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4085604250431061},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4006291329860687},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3698870539665222},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23632395267486572},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.22471171617507935},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057285","descriptor_name":"Precision Medicine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1109/tcbb.2020.3008196","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2020.3008196","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32750887","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32750887","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null},{"id":"pmh:oai:arXiv.org:2002.04078","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2002.04078","pdf_url":"https://arxiv.org/pdf/2002.04078","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"mag:3006134970","is_oa":true,"landing_page_url":"http://arxiv.org/pdf/2002.04078.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.2002.04078","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2002.04078","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2002.04078","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2002.04078","pdf_url":"https://arxiv.org/pdf/2002.04078","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[{"score":0.8199999928474426,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G5954187615","display_name":null,"funder_award_id":"114E115","funder_id":"https://openalex.org/F4320322626","funder_display_name":"T\u00fcrkiye Bilimsel ve Teknolojik Ara\u015ft\u0131rma Kurumu"}],"funders":[{"id":"https://openalex.org/F4320322626","display_name":"T\u00fcrkiye Bilimsel ve Teknolojik Ara\u015ft\u0131rma Kurumu","ror":"https://ror.org/04w9kkr77"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":101,"referenced_works":["https://openalex.org/W152480435","https://openalex.org/W213897953","https://openalex.org/W1567112601","https://openalex.org/W1662191912","https://openalex.org/W1935434993","https://openalex.org/W1974726848","https://openalex.org/W1977773843","https://openalex.org/W1978408474","https://openalex.org/W1981982297","https://openalex.org/W1982838078","https://openalex.org/W1983228667","https://openalex.org/W1989277387","https://openalex.org/W1990467031","https://openalex.org/W1992045522","https://openalex.org/W1995755619","https://openalex.org/W2003153311","https://openalex.org/W2007453631","https://openalex.org/W2011417152","https://openalex.org/W2018518196","https://openalex.org/W2030776070","https://openalex.org/W2039638713","https://openalex.org/W2040834897","https://openalex.org/W2044515618","https://openalex.org/W2049666831","https://openalex.org/W2057399242","https://openalex.org/W2062573649","https://openalex.org/W2068141066","https://openalex.org/W2072533587","https://openalex.org/W2078355959","https://openalex.org/W2078524519","https://openalex.org/W2084830302","https://openalex.org/W2085281262","https://openalex.org/W2090406819","https://openalex.org/W2100714130","https://openalex.org/W2101234009","https://openalex.org/W2110687686","https://openalex.org/W2112521228","https://openalex.org/W2115159982","https://openalex.org/W2119387367","https://openalex.org/W2126382397","https://openalex.org/W2129823286","https://openalex.org/W2130410032","https://openalex.org/W2130790725","https://openalex.org/W2132218677","https://openalex.org/W2133210805","https://openalex.org/W2135581618","https://openalex.org/W2139135974","https://openalex.org/W2139703939","https://openalex.org/W2143426320","https://openalex.org/W2144073719","https://openalex.org/W2153032620","https://openalex.org/W2154972152","https://openalex.org/W2162946128","https://openalex.org/W2163181319","https://openalex.org/W2165899056","https://openalex.org/W2167101736","https://openalex.org/W2167778120","https://openalex.org/W2171108478","https://openalex.org/W2288225021","https://openalex.org/W2322921974","https://openalex.org/W2334617819","https://openalex.org/W2340703376","https://openalex.org/W2395887422","https://openalex.org/W2409079259","https://openalex.org/W2411034702","https://openalex.org/W2494003068","https://openalex.org/W2516363685","https://openalex.org/W2594573607","https://openalex.org/W2599070308","https://openalex.org/W2605549446","https://openalex.org/W2606897259","https://openalex.org/W2613210283","https://openalex.org/W2751336292","https://openalex.org/W2763148304","https://openalex.org/W2767914218","https://openalex.org/W2777966573","https://openalex.org/W2780054069","https://openalex.org/W2783788528","https://openalex.org/W2789128799","https://openalex.org/W2791635715","https://openalex.org/W2794334542","https://openalex.org/W2803664483","https://openalex.org/W2806157403","https://openalex.org/W2807625668","https://openalex.org/W2819495965","https://openalex.org/W2884824869","https://openalex.org/W2901402567","https://openalex.org/W2903357856","https://openalex.org/W2914035075","https://openalex.org/W2919129599","https://openalex.org/W2948600471","https://openalex.org/W2949930735","https://openalex.org/W2950173838","https://openalex.org/W2950256799","https://openalex.org/W3003470753","https://openalex.org/W4233698560","https://openalex.org/W4234314512","https://openalex.org/W6637034065","https://openalex.org/W6675354045","https://openalex.org/W6753193990","https://openalex.org/W6977528248"],"related_works":["https://openalex.org/W4206552487","https://openalex.org/W2553632347","https://openalex.org/W2891493071","https://openalex.org/W3126862618","https://openalex.org/W192377586","https://openalex.org/W1963595418","https://openalex.org/W2592806593","https://openalex.org/W2315327149","https://openalex.org/W3213048827","https://openalex.org/W2582637393","https://openalex.org/W1987896487","https://openalex.org/W2888289165","https://openalex.org/W2624628190","https://openalex.org/W2742394932","https://openalex.org/W3186738226","https://openalex.org/W2007518984","https://openalex.org/W2179544415","https://openalex.org/W2120558414","https://openalex.org/W2749510389","https://openalex.org/W2032943026"],"abstract_inverted_index":{"The":[0,125],"metabolic":[1,122],"wiring":[2],"of":[3,17,33,52,58,67,82,127,162,171],"patient":[4],"cells":[5,59],"is":[6,129,188],"altered":[7],"drastically":[8],"in":[9,54,60,101,166,194],"many":[10],"diseases,":[11,134],"including":[12],"cancer.":[13,142],"Understanding":[14],"the":[15,22,31,55,65,120,147,169],"nature":[16],"such":[18],"changes":[19,53],"may":[20],"pave":[21],"way":[23],"for":[24,37,76,131],"new":[25],"therapeutic":[26],"opportunities":[27],"as":[28,30],"well":[29],"development":[32],"personalized":[34,103],"treatment":[35],"strategies":[36],"patients.":[38],"In":[39],"this":[40],"paper,":[41],"we":[42,177],"propose":[43],"an":[44,159],"algorithm":[45],"called":[46],"Metabolitics,":[47],"which":[48,197],"allows":[49],"systems-level":[50],"analysis":[51,89],"biochemical":[56],"network":[57,123],"disease":[61,69,83],"states.":[62],"It":[63],"enables":[64],"study":[66],"a":[68,77,91,102,191],"at":[70],"both":[71],"reaction-":[72],"and":[73,79,115,140,185],"pathway-level":[74],"granularities":[75],"detailed":[78],"summarized":[80],"view":[81],"etiology.":[84],"Metabolitics":[85,106,128],"employs":[86],"flux":[87,195],"variability":[88],"with":[90,183],"dynamically":[92],"built":[93],"objective":[94],"function":[95],"based":[96,118],"on":[97,119],"biofluid":[98],"metabolomics":[99],"measurements":[100],"manner.":[104],"Moreover,":[105],"builds":[107],"supervised":[108,149],"classification":[109],"models":[110,151],"to":[111,168,190],"discriminate":[112],"between":[113],"patients":[114,154],"healthy":[116,156],"subjects":[117],"computed":[121],"changes.":[124],"use":[126],"demonstrated":[130],"three":[132],"distinct":[133],"namely,":[135],"breast":[136,174],"cancer,":[137],"Crohn's":[138],"disease,":[139],"colorectal":[141],"Our":[143],"results":[144],"show":[145],"that":[146,179],"constructed":[148],"learning":[150],"successfully":[152],"differentiate":[153],"from":[155],"individuals":[157],"by":[158],"average":[160],"f1-score":[161],"88":[163],"percent.":[164],"Besides,":[165],"addition":[167],"confirmation":[170],"previously":[172],"reported":[173,201],"cancer-associated":[175],"pathways,":[176],"discovered":[178],"Biotin":[180],"Metabolism":[181,187],"along":[182],"Arginine":[184],"Proline":[186],"subject":[189],"significant":[192],"increase":[193],"capacity,":[196],"have":[198],"not":[199],"been":[200],"before.":[202]},"counts_by_year":[],"updated_date":"2026-04-09T08:11:56.329763","created_date":"2025-10-10T00:00:00"}
