{"id":"https://openalex.org/W3013450562","doi":"https://doi.org/10.1109/tcbb.2020.2982873","title":"ncRFP: A Novel end-to-end Method for Non-Coding RNAs Family Prediction Based on Deep Learning","display_name":"ncRFP: A Novel end-to-end Method for Non-Coding RNAs Family Prediction Based on Deep Learning","publication_year":2020,"publication_date":"2020-03-30","ids":{"openalex":"https://openalex.org/W3013450562","doi":"https://doi.org/10.1109/tcbb.2020.2982873","mag":"3013450562","pmid":"https://pubmed.ncbi.nlm.nih.gov/32224462"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2020.2982873","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tcbb.2020.2982873","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://doi.org/10.1109/tcbb.2020.2982873","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053870351","display_name":"Linyu Wang","orcid":"https://orcid.org/0000-0002-1154-6530"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Linyu Wang","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I4210134929","https://openalex.org/I194450716"]},{"raw_affiliation_string":"Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032705404","display_name":"Shaoge Zheng","orcid":null},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shaoge Zheng","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I4210134929","https://openalex.org/I194450716"]},{"raw_affiliation_string":"Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100396872","display_name":"Hao Zhang","orcid":"https://orcid.org/0000-0002-2058-7123"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hao Zhang","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I4210134929","https://openalex.org/I194450716"]},{"raw_affiliation_string":"Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010365935","display_name":"Zhiyang Qiu","orcid":null},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhiyang Qiu","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I4210134929","https://openalex.org/I194450716"]},{"raw_affiliation_string":"Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032764893","display_name":"Xiaodan Zhong","orcid":"https://orcid.org/0000-0001-5268-3905"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210125137","display_name":"First Hospital of Jilin University","ror":"https://ror.org/034haf133","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210125137"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaodan Zhong","raw_affiliation_strings":["Department of Pediatric Oncology, The First Hospital of Jilin University, Changchun, Jilin, China","College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","The First Hospital of Jilin University, Changchun, Jilin, China"],"affiliations":[{"raw_affiliation_string":"Department of Pediatric Oncology, The First Hospital of Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I4210125137","https://openalex.org/I194450716"]},{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I4210134929","https://openalex.org/I194450716"]},{"raw_affiliation_string":"The First Hospital of Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I4210125137","https://openalex.org/I194450716"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044570994","display_name":"Haiming Liuliu","orcid":null},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haiming Liu","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I4210134929","https://openalex.org/I194450716"]},{"raw_affiliation_string":"Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045370732","display_name":"Yuanning Liu","orcid":"https://orcid.org/0000-0001-7926-7936"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210134929","display_name":"Jilin Province Science and Technology Department","ror":"https://ror.org/049x38272","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210134929"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuanning Liu","raw_affiliation_strings":["College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China"],"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I4210134929","https://openalex.org/I194450716"]},{"raw_affiliation_string":"Key Laboratory of Symbolic Computation and Knowledge Engineering, Ministry of Education, Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5053870351"],"corresponding_institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210134929"],"apc_list":null,"apc_paid":null,"fwci":1.2774,"has_fulltext":false,"cited_by_count":31,"citation_normalized_percentile":{"value":0.77581864,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"18","issue":"2","first_page":"784","last_page":"789"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6630046367645264},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.5920577049255371},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5137935280799866},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.5000410079956055},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4977453052997589},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.48154929280281067},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4487610161304474},{"id":"https://openalex.org/keywords/non-coding-rna","display_name":"Non-coding RNA","score":0.43899938464164734},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.3774328827857971},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3717415928840637},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20025524497032166},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15302398800849915},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13230103254318237},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11107850074768066}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6630046367645264},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.5920577049255371},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5137935280799866},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.5000410079956055},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4977453052997589},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.48154929280281067},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4487610161304474},{"id":"https://openalex.org/C194993378","wikidata":"https://www.wikidata.org/wiki/Q427087","display_name":"Non-coding RNA","level":4,"score":0.43899938464164734},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.3774328827857971},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3717415928840637},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20025524497032166},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15302398800849915},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13230103254318237},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11107850074768066},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009690","descriptor_name":"Nucleic Acid Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":true},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D022661","descriptor_name":"RNA, Untranslated","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2020.2982873","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tcbb.2020.2982873","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32224462","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32224462","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":{"id":"doi:10.1109/tcbb.2020.2982873","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tcbb.2020.2982873","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1643819463","display_name":null,"funder_award_id":"2019C053-2","funder_id":"https://openalex.org/F4320310121","funder_display_name":"Natural Science Foundation of Jilin Province"},{"id":"https://openalex.org/G6256652140","display_name":null,"funder_award_id":"2019C053-6","funder_id":"https://openalex.org/F4320310121","funder_display_name":"Natural Science Foundation of Jilin Province"},{"id":"https://openalex.org/G8366074997","display_name":null,"funder_award_id":"61471181","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320310121","display_name":"Natural Science Foundation of Jilin Province","ror":null},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1522301498","https://openalex.org/W1577822803","https://openalex.org/W1605366962","https://openalex.org/W1902237438","https://openalex.org/W1967102258","https://openalex.org/W2025763720","https://openalex.org/W2028070629","https://openalex.org/W2037313242","https://openalex.org/W2078263411","https://openalex.org/W2090659281","https://openalex.org/W2095705004","https://openalex.org/W2108230379","https://openalex.org/W2127432713","https://openalex.org/W2130979840","https://openalex.org/W2134489577","https://openalex.org/W2151922790","https://openalex.org/W2156021317","https://openalex.org/W2172030723","https://openalex.org/W2528305538","https://openalex.org/W2740619578","https://openalex.org/W2754689878","https://openalex.org/W2800965800","https://openalex.org/W2808160035","https://openalex.org/W2917883546","https://openalex.org/W2919479895","https://openalex.org/W2922362609","https://openalex.org/W2943588752","https://openalex.org/W2948041524","https://openalex.org/W2964121744","https://openalex.org/W6631190155","https://openalex.org/W6674330103","https://openalex.org/W6763670675"],"related_works":["https://openalex.org/W2147993839","https://openalex.org/W1840103016","https://openalex.org/W2898732673","https://openalex.org/W54859794","https://openalex.org/W2064941026","https://openalex.org/W2058984380","https://openalex.org/W1988125422","https://openalex.org/W2900182103","https://openalex.org/W3183769948","https://openalex.org/W3184762873"],"abstract_inverted_index":{"Evidence":[0],"has":[1],"accumulated":[2],"enough":[3],"to":[4,42,54,68,93,104,140],"prove":[5],"non-coding":[6],"RNAs":[7],"(ncRNAs)":[8],"play":[9],"important":[10],"roles":[11],"in":[12],"cellular":[13],"biological":[14],"processes":[15],"and":[16,52,98],"disease":[17],"pathogenesis.":[18],"High":[19],"throughput":[20],"techniques":[21],"have":[22],"produced":[23],"a":[24,133],"large":[25],"number":[26],"of":[27,37,45,50,58,72,88,106,118,127,150,184],"ncRNAs":[28,38,101,158,165],"whose":[29],"function":[30],"remains":[31],"unknown.":[32],"Since":[33],"the":[34,43,56,70,95,107,111,116,125,142,152,157,175],"accurate":[35],"identification":[36],"family":[39,57,71,102,159],"is":[40,49,91],"helpful":[41],"research":[44],"their":[46,74],"function,":[47],"it":[48],"necessity":[51],"urgency":[53],"predict":[55,69,94],"each":[59],"ncRNAs.":[60],"Although":[61],"several":[62],"traditional":[63],"excellent":[64],"methods":[65,90],"are":[66],"applicable":[67],"ncRNAs,":[73],"complex":[75],"procedures":[76],"or":[77],"inaccurate":[78],"performance":[79],"remain":[80],"major":[81],"problems":[82],"confronting":[83],"us.":[84],"The":[85,181],"main":[86],"idea":[87],"those":[89],"first":[92],"secondary":[96,108,120,153],"structure,":[97,154],"then":[99],"identify":[100],"according":[103],"properties":[105],"structure.":[109],"Unfortunately,":[110],"multi-step":[112],"error":[113],"superposition,":[114],"especially":[115],"imperfection":[117],"RNA":[119],"structure":[121],"prediction":[122,143],"tools,":[123],"maybe":[124],"cause":[126],"low":[128],"accuracy.":[129,180],"In":[130],"this":[131],"paper,":[132],"novel":[134],"end-to-end":[135],"method":[136],"'ncRFP'":[137],"was":[138],"proposed":[139],"complete":[141],"task":[144],"based":[145],"on":[146],"Deep":[147],"Learning.":[148],"Instead":[149],"predicting":[151],"ncRFP":[155,171,185],"predicts":[156],"by":[160],"automatically":[161],"extracting":[162],"features":[163],"from":[164],"sequences.":[166],"Compared":[167],"with":[168],"other":[169],"methods,":[170],"not":[172],"only":[173],"simplifies":[174],"process":[176],"but":[177],"also":[178],"improves":[179],"source":[182],"code":[183],"can":[186],"be":[187],"available":[188],"at":[189],"https://github.com/linyuwangPHD/ncRFP.":[190]},"counts_by_year":[{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-11T08:14:18.477133","created_date":"2025-10-10T00:00:00"}
