{"id":"https://openalex.org/W2945300448","doi":"https://doi.org/10.1109/tcbb.2019.2911081","title":"Screening Pipeline for Flavivirus Based Inhibitors for Zika Virus NS1","display_name":"Screening Pipeline for Flavivirus Based Inhibitors for Zika Virus NS1","publication_year":2019,"publication_date":"2019-05-21","ids":{"openalex":"https://openalex.org/W2945300448","doi":"https://doi.org/10.1109/tcbb.2019.2911081","mag":"2945300448","pmid":"https://pubmed.ncbi.nlm.nih.gov/30990437"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2019.2911081","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2019.2911081","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077849410","display_name":"Saad Raza","orcid":"https://orcid.org/0000-0003-4842-2192"},"institutions":[{"id":"https://openalex.org/I12469534","display_name":"Quaid-i-Azam University","ror":"https://ror.org/04s9hft57","country_code":"PK","type":"education","lineage":["https://openalex.org/I12469534"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Saad Raza","raw_affiliation_strings":["Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, Pakistan","institution_ids":["https://openalex.org/I12469534"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101597199","display_name":"Ghulam Abbas","orcid":"https://orcid.org/0000-0001-8476-2181"},"institutions":[{"id":"https://openalex.org/I12469534","display_name":"Quaid-i-Azam University","ror":"https://ror.org/04s9hft57","country_code":"PK","type":"education","lineage":["https://openalex.org/I12469534"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Ghulam Abbas","raw_affiliation_strings":["Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, Pakistan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, Pakistan","institution_ids":["https://openalex.org/I12469534"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5036929679","display_name":"Syed Sikander Azam","orcid":"https://orcid.org/0000-0001-5624-6120"},"institutions":[{"id":"https://openalex.org/I12469534","display_name":"Quaid-i-Azam University","ror":"https://ror.org/04s9hft57","country_code":"PK","type":"education","lineage":["https://openalex.org/I12469534"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Syed Sikander Azam","raw_affiliation_strings":["Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, Pakistan"],"raw_orcid":"https://orcid.org/0000-0001-5624-6120","affiliations":[{"raw_affiliation_string":"Computational Biology Lab, National Center for Bioinformatics, Quaid-i-Azam University, Islamabad, Pakistan","institution_ids":["https://openalex.org/I12469534"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I12469534"],"apc_list":null,"apc_paid":null,"fwci":2.9754,"has_fulltext":false,"cited_by_count":23,"citation_normalized_percentile":{"value":0.90394723,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"17","issue":"5","first_page":"1751","last_page":"1761"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10166","display_name":"Mosquito-borne diseases and control","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10166","display_name":"Mosquito-borne diseases and control","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10091","display_name":"Malaria Research and Control","score":0.9825999736785889,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9611999988555908,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/zika-virus","display_name":"Zika virus","score":0.9837473630905151},{"id":"https://openalex.org/keywords/flavivirus","display_name":"Flavivirus","score":0.8409905433654785},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.6234357357025146},{"id":"https://openalex.org/keywords/microcephaly","display_name":"Microcephaly","score":0.6017603874206543},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.5717707872390747},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.5644567608833313},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5072912573814392},{"id":"https://openalex.org/keywords/antiviral-drug","display_name":"Antiviral drug","score":0.4648996889591217},{"id":"https://openalex.org/keywords/flaviviridae","display_name":"Flaviviridae","score":0.46408721804618835},{"id":"https://openalex.org/keywords/dengue-virus","display_name":"Dengue virus","score":0.4324905276298523},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4296305775642395},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.34614771604537964},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.23222070932388306},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13558372855186462},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1331844925880432},{"id":"https://openalex.org/keywords/viral-disease","display_name":"Viral disease","score":0.11137750744819641}],"concepts":[{"id":"https://openalex.org/C2777053367","wikidata":"https://www.wikidata.org/wiki/Q202864","display_name":"Zika virus","level":3,"score":0.9837473630905151},{"id":"https://openalex.org/C2780568436","wikidata":"https://www.wikidata.org/wiki/Q1165479","display_name":"Flavivirus","level":3,"score":0.8409905433654785},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.6234357357025146},{"id":"https://openalex.org/C2776395126","wikidata":"https://www.wikidata.org/wiki/Q431643","display_name":"Microcephaly","level":2,"score":0.6017603874206543},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.5717707872390747},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.5644567608833313},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5072912573814392},{"id":"https://openalex.org/C2779756493","wikidata":"https://www.wikidata.org/wiki/Q846227","display_name":"Antiviral drug","level":3,"score":0.4648996889591217},{"id":"https://openalex.org/C2777510210","wikidata":"https://www.wikidata.org/wiki/Q1331256","display_name":"Flaviviridae","level":4,"score":0.46408721804618835},{"id":"https://openalex.org/C2779635636","wikidata":"https://www.wikidata.org/wiki/Q476209","display_name":"Dengue virus","level":3,"score":0.4324905276298523},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4296305775642395},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.34614771604537964},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.23222070932388306},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13558372855186462},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1331844925880432},{"id":"https://openalex.org/C2780727368","wikidata":"https://www.wikidata.org/wiki/Q1928978","display_name":"Viral disease","level":3,"score":0.11137750744819641},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000071243","descriptor_name":"Zika Virus Infection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071243","descriptor_name":"Zika Virus Infection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071243","descriptor_name":"Zika Virus Infection","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071244","descriptor_name":"Zika Virus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071244","descriptor_name":"Zika Virus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000071244","descriptor_name":"Zika Virus","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D000998","descriptor_name":"Antiviral Agents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017361","descriptor_name":"Viral Nonstructural Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D017361","descriptor_name":"Viral Nonstructural Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D017361","descriptor_name":"Viral Nonstructural Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D017361","descriptor_name":"Viral Nonstructural Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D017361","descriptor_name":"Viral Nonstructural Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D017361","descriptor_name":"Viral Nonstructural Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D062105","descriptor_name":"Molecular Docking Simulation","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2019.2911081","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2019.2911081","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30990437","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30990437","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8799999952316284,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":55,"referenced_works":["https://openalex.org/W1487233798","https://openalex.org/W1968984443","https://openalex.org/W1974234430","https://openalex.org/W1976499671","https://openalex.org/W1979001015","https://openalex.org/W1983863966","https://openalex.org/W2001354744","https://openalex.org/W2008216856","https://openalex.org/W2014858249","https://openalex.org/W2029667189","https://openalex.org/W2037535298","https://openalex.org/W2041511615","https://openalex.org/W2042530028","https://openalex.org/W2044285145","https://openalex.org/W2050456292","https://openalex.org/W2050611351","https://openalex.org/W2070787809","https://openalex.org/W2070885633","https://openalex.org/W2073049582","https://openalex.org/W2075802963","https://openalex.org/W2081912151","https://openalex.org/W2085335543","https://openalex.org/W2098466244","https://openalex.org/W2106140689","https://openalex.org/W2110329144","https://openalex.org/W2129438079","https://openalex.org/W2130502320","https://openalex.org/W2132629607","https://openalex.org/W2134967712","https://openalex.org/W2134971931","https://openalex.org/W2139017313","https://openalex.org/W2139993960","https://openalex.org/W2142481964","https://openalex.org/W2154319440","https://openalex.org/W2160049658","https://openalex.org/W2160310346","https://openalex.org/W2169064131","https://openalex.org/W2170397837","https://openalex.org/W2178567898","https://openalex.org/W2234047240","https://openalex.org/W2267962002","https://openalex.org/W2268538245","https://openalex.org/W2285713692","https://openalex.org/W2288442727","https://openalex.org/W2294983505","https://openalex.org/W2297318611","https://openalex.org/W2302403659","https://openalex.org/W2302414979","https://openalex.org/W2315022235","https://openalex.org/W2325034207","https://openalex.org/W2460500742","https://openalex.org/W2497891252","https://openalex.org/W2612060048","https://openalex.org/W2743487040","https://openalex.org/W4292670429"],"related_works":["https://openalex.org/W2343858887","https://openalex.org/W2519355024","https://openalex.org/W2588222801","https://openalex.org/W2755675016","https://openalex.org/W2943950259","https://openalex.org/W3043040339","https://openalex.org/W4285329410","https://openalex.org/W2498864382","https://openalex.org/W4297321142","https://openalex.org/W2028198504"],"abstract_inverted_index":{"In-silico":[0],"pipeline":[1],"is":[2,39,55,103,115],"applied":[3],"for":[4,43,159,174,191],"identifying":[5],"and":[6,33,46,62,69,100,138,150,184],"designing":[7,189],"novel":[8,120],"inhibitors":[9],"against":[10],"ZIKV":[11,29,78,86,175,182],"NS1":[12,30],"protein.":[13],"Comparative":[14],"molecular":[15,163],"docking":[16,128],"studies":[17],"are":[18,133],"performed":[19],"to":[20,28,76,117,135],"explore":[21],"the":[22,72,85,106,141,154,192],"binding":[23],"of":[24,172,194],"structurally":[25],"diverse":[26],"compounds":[27,124,161],"by":[31,48],"AutoDock/Vina":[32],"GOLD.":[34],"The":[35],"Zika":[36],"virus":[37],"(ZIKV)":[38],"a":[40,79,92,112],"flavivirus,":[41],"responsible":[42],"life-threatening":[44],"infections":[45,183],"transmitted":[47],"Aedes":[49],"mosquitoes":[50],"in":[51,67,105,188],"other":[52],"organisms.":[53],"It":[54],"associated":[56],"with":[57,146,153],"Guillain":[58],"Barre":[59],"Syndrome":[60],"(GBS)":[61],"microcephaly.":[63],"This":[64,177],"epidemic":[65],"increase":[66],"GBS":[68],"microcephaly":[70],"convoyed":[71],"World":[73],"Health":[74],"Organization":[75],"affirm":[77],"public":[80],"health":[81],"crisis.":[82],"To":[83],"combat":[84],"infections,":[87],"non-structural":[88],"protein":[89],"1":[90],"(NS1),":[91],"major":[93],"host-interaction":[94],"molecule":[95],"contributing":[96],"towards":[97,180],"replication,":[98],"pathogenesis":[99],"immune":[101],"evasion":[102],"targeted":[104],"current":[107],"study.":[108],"For":[109],"this":[110],"purpose,":[111],"comprehensive":[113],"study":[114,178],"required":[116],"develop":[118],"potential":[119],"antiviral":[121],"inhibitors.":[122],"Three":[123],"were":[125,157],"identified":[126],"through":[127],"programs":[129],"exhibiting":[130],"properties":[131],"which":[132],"non-toxic":[134],"human":[136],"host":[137],"could":[139],"inhibit":[140],"elusive":[142],"ZIKV.":[143,195],"Significant":[144],"interaction":[145],"active":[147],"site":[148],"residues":[149,156],"H-bond":[151],"interactions":[152],"key":[155],"analyzed":[158],"these":[160],"using":[162],"dynamics":[164],"simulation.":[165],"Free":[166],"energy":[167],"calculation":[168],"predicted":[169],"higher":[170],"affinity":[171],"Deoxycalyxin-A":[173],"NS1.":[176],"contributes":[179],"fighting":[181],"can":[185],"help":[186],"researchers":[187],"drug":[190],"treatment":[193]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2}],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2025-10-10T00:00:00"}
