{"id":"https://openalex.org/W2899950364","doi":"https://doi.org/10.1109/tcbb.2018.2880202","title":"Two New Heuristic Methods for Protein Model Quality Assessment","display_name":"Two New Heuristic Methods for Protein Model Quality Assessment","publication_year":2018,"publication_date":"2018-11-09","ids":{"openalex":"https://openalex.org/W2899950364","doi":"https://doi.org/10.1109/tcbb.2018.2880202","mag":"2899950364","pmid":"https://pubmed.ncbi.nlm.nih.gov/30418914"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2018.2880202","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2018.2880202","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8988942","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100350662","display_name":"Wenbo Wang","orcid":"https://orcid.org/0000-0001-8275-1067"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wenbo Wang","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO, USA","Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, USA"],"raw_orcid":"https://orcid.org/0000-0001-8275-1067","affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101617584","display_name":"Junlin Wang","orcid":"https://orcid.org/0000-0002-7331-3580"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Junlin Wang","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO, USA","Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082428303","display_name":"Dong Xu","orcid":"https://orcid.org/0000-0002-4809-0514"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dong Xu","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO, USA","Christopher S. Bond Life Science Center, University of Missouri, Columbia, USA","Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, USA"],"raw_orcid":"https://orcid.org/0000-0002-4809-0514","affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Christopher S. Bond Life Science Center, University of Missouri, Columbia, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5057883374","display_name":"Yi Shang","orcid":"https://orcid.org/0000-0001-7771-4034"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yi Shang","raw_affiliation_strings":["Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO, USA","Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, USA"],"raw_orcid":"https://orcid.org/0000-0001-7771-4034","affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, MO, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Department of Electrical Engineering and Computer Science, University of Missouri, Columbia, USA","institution_ids":["https://openalex.org/I76835614"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I76835614"],"apc_list":null,"apc_paid":null,"fwci":0.4949,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.62660595,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"17","issue":"4","first_page":"1430","last_page":"1439"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7485957145690918},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.6851989030838013},{"id":"https://openalex.org/keywords/heuristic","display_name":"Heuristic","score":0.646904706954956},{"id":"https://openalex.org/keywords/template","display_name":"Template","score":0.5508511066436768},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5368341207504272},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.5294111967086792},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.4793858528137207},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.46784743666648865},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4316948652267456},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38137930631637573},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.15570151805877686},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.10835134983062744}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7485957145690918},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.6851989030838013},{"id":"https://openalex.org/C173801870","wikidata":"https://www.wikidata.org/wiki/Q201413","display_name":"Heuristic","level":2,"score":0.646904706954956},{"id":"https://openalex.org/C82714645","wikidata":"https://www.wikidata.org/wiki/Q438331","display_name":"Template","level":2,"score":0.5508511066436768},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5368341207504272},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.5294111967086792},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.4793858528137207},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.46784743666648865},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4316948652267456},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38137930631637573},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.15570151805877686},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.10835134983062744},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C46141821","wikidata":"https://www.wikidata.org/wiki/Q209402","display_name":"Nuclear magnetic resonance","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000067508","descriptor_name":"Computer Heuristics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000067508","descriptor_name":"Computer Heuristics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000067508","descriptor_name":"Computer Heuristics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000067508","descriptor_name":"Computer Heuristics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1109/tcbb.2018.2880202","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2018.2880202","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043","2998-4165"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30418914","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30418914","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8988942","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8988942","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE/ACM Trans Comput Biol Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:8988942","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8988942","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE/ACM Trans Comput Biol Bioinform","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1844856859","display_name":null,"funder_award_id":"CNS-1429294","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2592954042","display_name":null,"funder_award_id":"R01\u2010GM100701","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G2838342567","display_name":null,"funder_award_id":"R01 GM100701","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G68000371","display_name":null,"funder_award_id":"CNS\u20101429294","funder_id":"https://openalex.org/F4320335353","funder_display_name":"National Science Foundation of Sri Lanka"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320335353","display_name":"National Science Foundation of Sri Lanka","ror":"https://ror.org/010xaa060"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W154649611","https://openalex.org/W1763545885","https://openalex.org/W1940137454","https://openalex.org/W1965615878","https://openalex.org/W1998676514","https://openalex.org/W1999613945","https://openalex.org/W1999973733","https://openalex.org/W2016707108","https://openalex.org/W2018820972","https://openalex.org/W2022486593","https://openalex.org/W2026478054","https://openalex.org/W2033357321","https://openalex.org/W2090778977","https://openalex.org/W2093567555","https://openalex.org/W2103986334","https://openalex.org/W2110483430","https://openalex.org/W2115540209","https://openalex.org/W2116672918","https://openalex.org/W2117451312","https://openalex.org/W2119068667","https://openalex.org/W2123085274","https://openalex.org/W2125677968","https://openalex.org/W2126711803","https://openalex.org/W2143210482","https://openalex.org/W2145268834","https://openalex.org/W2150831049","https://openalex.org/W2158714788","https://openalex.org/W2161151688","https://openalex.org/W2161776897","https://openalex.org/W2207830515","https://openalex.org/W2218781370","https://openalex.org/W2342423939","https://openalex.org/W2418704427","https://openalex.org/W2512869966","https://openalex.org/W2514534732","https://openalex.org/W2517233028","https://openalex.org/W2559617060","https://openalex.org/W2565608178","https://openalex.org/W2594725344","https://openalex.org/W2609811411","https://openalex.org/W2616930327","https://openalex.org/W2805338223","https://openalex.org/W6731372591"],"related_works":["https://openalex.org/W2121300814","https://openalex.org/W4234406076","https://openalex.org/W1886613375","https://openalex.org/W4236081792","https://openalex.org/W4250583430","https://openalex.org/W2010731026","https://openalex.org/W2360893094","https://openalex.org/W3023334178","https://openalex.org/W2036923798","https://openalex.org/W2113993025"],"abstract_inverted_index":{"Protein":[0],"tertiary":[1],"structure":[2,177],"prediction":[3,178],"is":[4,44,64,104],"an":[5],"important":[6],"open":[7],"challenge":[8],"in":[9,169,174,185],"bioinformatics":[10],"and":[11,60,142,180],"requires":[12],"effective":[13],"methods":[14,30,56,153,164],"to":[15,89,107,127],"accurately":[16],"evaluate":[17],"the":[18,35,40,71,76,93,117,124,170,175],"quality":[19,27,73],"of":[20,95,150],"protein":[21,78,90,176],"3-D":[22],"models":[23,141],"generated":[24],"computationally.":[25],"Many":[26],"assessment":[28],"(QA)":[29],"have":[31,143,154,165],"been":[32,166],"proposed":[33],"over":[34,158],"past":[36],"three":[37],"decades.":[38],"However,":[39],"accuracy":[41],"or":[42],"robustness":[43],"unsatisfactory":[45],"for":[46],"practical":[47],"applications.":[48],"In":[49,115,161],"this":[50],"paper,":[51],"two":[52,152],"new":[53],"heuristic":[54,103],"QA":[55,67,131],"are":[57],"proposed:":[58],"MUfoldQA_S":[59,63,120],"MUfoldQA_C.":[61],"The":[62],"a":[65,97,129],"quasi-single-model":[66],"method":[68,132],"that":[69,133],"assesses":[70],"model":[72],"based":[74],"on":[75],"known":[77],"structures":[79],"with":[80,123],"similar":[81],"sequences.":[82],"This":[83],"algorithm":[84],"can":[85],"be":[86],"directly":[87],"applied":[88],"fragments":[91],"without":[92],"necessity":[94],"building":[96],"full":[98],"structural":[99],"model.":[100],"A":[101],"BLOSUM-based":[102],"also":[105,135],"introduced":[106],"help":[108],"differentiate":[109],"accurate":[110],"templates":[111],"from":[112,119,138],"poor":[113],"ones.":[114],"MUfoldQA_C,":[116],"ideas":[118],"were":[121],"combined":[122],"consensus":[125],"approach":[126],"create":[128],"multi-model":[130],"could":[134],"utilize":[136],"information":[137],"existing":[139,159],"reference":[140],"demonstrated":[144],"improved":[145],"performance.":[146],"Extensive":[147],"experimental":[148],"results":[149],"these":[151],"shown":[155],"significant":[156],"improvement":[157],"methods.":[160],"addition,":[162],"both":[163],"blindly":[167],"tested":[168],"CASP12":[171],"world-wide":[172],"competition":[173],"field":[179],"ranked":[181],"as":[182],"top":[183],"performers":[184],"their":[186],"respective":[187],"categories.":[188]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
