{"id":"https://openalex.org/W2323504902","doi":"https://doi.org/10.1109/tcbb.2016.2550430","title":"SuperMIC: Analyzing Large Biological Datasets in Bioinformatics with Maximal Information Coefficient","display_name":"SuperMIC: Analyzing Large Biological Datasets in Bioinformatics with Maximal Information Coefficient","publication_year":2016,"publication_date":"2016-04-05","ids":{"openalex":"https://openalex.org/W2323504902","doi":"https://doi.org/10.1109/tcbb.2016.2550430","mag":"2323504902","pmid":"https://pubmed.ncbi.nlm.nih.gov/27076457"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2016.2550430","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2016.2550430","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063435237","display_name":"Chao Wang","orcid":"https://orcid.org/0000-0003-0919-8781"},"institutions":[{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Chao Wang","raw_affiliation_strings":["University of Science and Technology of China, Hefei, Anhui, China","University of Science and Technology of China, Hefei,Anhui,China#TAB#"],"affiliations":[{"raw_affiliation_string":"University of Science and Technology of China, Hefei, Anhui, China","institution_ids":["https://openalex.org/I126520041"]},{"raw_affiliation_string":"University of Science and Technology of China, Hefei,Anhui,China#TAB#","institution_ids":["https://openalex.org/I126520041"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012002926","display_name":"Dong Dai","orcid":"https://orcid.org/0000-0003-4078-8149"},"institutions":[{"id":"https://openalex.org/I12315562","display_name":"Texas Tech University","ror":"https://ror.org/0405mnx93","country_code":"US","type":"education","lineage":["https://openalex.org/I12315562"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dong Dai","raw_affiliation_strings":["School of Computer Science, Texas Tech University, Lubbock, TX"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, Texas Tech University, Lubbock, TX","institution_ids":["https://openalex.org/I12315562"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100407701","display_name":"Xi Li","orcid":"https://orcid.org/0000-0001-6325-3230"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xi Li","raw_affiliation_strings":["Suzhou Institute, University of Science and Technology of China, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"Suzhou Institute, University of Science and Technology of China, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100693066","display_name":"Aili Wang","orcid":"https://orcid.org/0000-0002-8124-9697"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]},{"id":"https://openalex.org/I126520041","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09","country_code":"CN","type":"education","lineage":["https://openalex.org/I126520041","https://openalex.org/I19820366"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Aili Wang","raw_affiliation_strings":["School of Software Engineering, University of Science and Technology of China, Suzhou, Jiangsu, China","[School of Software Engineering, University of Science and Technology of China, Suzhou, Jiangsu, China]"],"affiliations":[{"raw_affiliation_string":"School of Software Engineering, University of Science and Technology of China, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837","https://openalex.org/I126520041"]},{"raw_affiliation_string":"[School of Software Engineering, University of Science and Technology of China, Suzhou, Jiangsu, China]","institution_ids":["https://openalex.org/I308837","https://openalex.org/I126520041"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077322091","display_name":"Xuehai Zhou","orcid":"https://orcid.org/0000-0002-8360-3143"},"institutions":[{"id":"https://openalex.org/I308837","display_name":"Suzhou University of Science and Technology","ror":"https://ror.org/04en8wb91","country_code":"CN","type":"education","lineage":["https://openalex.org/I308837"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xuehai Zhou","raw_affiliation_strings":["Suzhou Institute, University of Science and Technology of China, Suzhou, Jiangsu, China"],"affiliations":[{"raw_affiliation_string":"Suzhou Institute, University of Science and Technology of China, Suzhou, Jiangsu, China","institution_ids":["https://openalex.org/I308837"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5063435237"],"corresponding_institution_ids":["https://openalex.org/I126520041"],"apc_list":null,"apc_paid":null,"fwci":0.5002,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.69704314,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"14","issue":"4","first_page":"783","last_page":"795"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7666512727737427},{"id":"https://openalex.org/keywords/speedup","display_name":"Speedup","score":0.7274028062820435},{"id":"https://openalex.org/keywords/correctness","display_name":"Correctness","score":0.7240127921104431},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.5710033178329468},{"id":"https://openalex.org/keywords/partition","display_name":"Partition (number theory)","score":0.5701349973678589},{"id":"https://openalex.org/keywords/acceleration","display_name":"Acceleration","score":0.5301709175109863},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.5162417888641357},{"id":"https://openalex.org/keywords/cache","display_name":"Cache","score":0.4877780079841614},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4305272698402405},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.4221649467945099},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3515249490737915},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3282541334629059},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.14401841163635254},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14308789372444153}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7666512727737427},{"id":"https://openalex.org/C68339613","wikidata":"https://www.wikidata.org/wiki/Q1549489","display_name":"Speedup","level":2,"score":0.7274028062820435},{"id":"https://openalex.org/C55439883","wikidata":"https://www.wikidata.org/wiki/Q360812","display_name":"Correctness","level":2,"score":0.7240127921104431},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.5710033178329468},{"id":"https://openalex.org/C42812","wikidata":"https://www.wikidata.org/wiki/Q1082910","display_name":"Partition (number theory)","level":2,"score":0.5701349973678589},{"id":"https://openalex.org/C117896860","wikidata":"https://www.wikidata.org/wiki/Q11376","display_name":"Acceleration","level":2,"score":0.5301709175109863},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.5162417888641357},{"id":"https://openalex.org/C115537543","wikidata":"https://www.wikidata.org/wiki/Q165596","display_name":"Cache","level":2,"score":0.4877780079841614},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4305272698402405},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.4221649467945099},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3515249490737915},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3282541334629059},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.14401841163635254},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14308789372444153},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C74650414","wikidata":"https://www.wikidata.org/wiki/Q11397","display_name":"Classical mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2016.2550430","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2016.2550430","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27076457","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27076457","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.49000000953674316,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G1182658191","display_name":null,"funder_award_id":"61379040","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1795454165","display_name":null,"funder_award_id":"61221062","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2366084430","display_name":null,"funder_award_id":"XDA06010403","funder_id":"https://openalex.org/F4320337515","funder_display_name":"Center for Advanced Study, University of Illinois at Urbana-Champaign"},{"id":"https://openalex.org/G3561269033","display_name":null,"funder_award_id":"61222204","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G380041391","display_name":null,"funder_award_id":"61272131","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4419406104","display_name":null,"funder_award_id":"SBK201240198","funder_id":"https://openalex.org/F4320322769","funder_display_name":"Natural Science Foundation of Jiangsu Province"},{"id":"https://openalex.org/G5340841820","display_name":null,"funder_award_id":"61202053","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6823762549","display_name":null,"funder_award_id":"WK2150110003","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322769","display_name":"Natural Science Foundation of Jiangsu Province","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320325599","display_name":"University of Science and Technology of China","ror":"https://ror.org/04c4dkn09"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null},{"id":"https://openalex.org/F4320337387","display_name":"Division of Computing and Communication Foundations","ror":"https://ror.org/01mng8331"},{"id":"https://openalex.org/F4320337515","display_name":"Center for Advanced Study, University of Illinois at Urbana-Champaign","ror":"https://ror.org/047426m28"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W1591178201","https://openalex.org/W1912475167","https://openalex.org/W1970156673","https://openalex.org/W1970737190","https://openalex.org/W1977512185","https://openalex.org/W1999303581","https://openalex.org/W2004127671","https://openalex.org/W2006496146","https://openalex.org/W2018348175","https://openalex.org/W2018582985","https://openalex.org/W2030903985","https://openalex.org/W2046626049","https://openalex.org/W2055905213","https://openalex.org/W2060465989","https://openalex.org/W2060965620","https://openalex.org/W2071756636","https://openalex.org/W2080038972","https://openalex.org/W2082346787","https://openalex.org/W2084594458","https://openalex.org/W2091940856","https://openalex.org/W2092939357","https://openalex.org/W2095841525","https://openalex.org/W2096220103","https://openalex.org/W2113487832","https://openalex.org/W2114771311","https://openalex.org/W2131989143","https://openalex.org/W2143096356","https://openalex.org/W2146496959","https://openalex.org/W2149350210","https://openalex.org/W2152142354","https://openalex.org/W2152839228","https://openalex.org/W2153287401","https://openalex.org/W2154826966","https://openalex.org/W2156875677","https://openalex.org/W2165700458","https://openalex.org/W2171033594","https://openalex.org/W2172236671","https://openalex.org/W2173213060","https://openalex.org/W2264240622","https://openalex.org/W4241632897","https://openalex.org/W4243490065","https://openalex.org/W6649993391"],"related_works":["https://openalex.org/W2058965144","https://openalex.org/W2164382479","https://openalex.org/W98480971","https://openalex.org/W2150291671","https://openalex.org/W2027972911","https://openalex.org/W2146343568","https://openalex.org/W2013643406","https://openalex.org/W2157978810","https://openalex.org/W2597809628","https://openalex.org/W3046370962"],"abstract_inverted_index":{"The":[0,59,95],"maximal":[1],"information":[2],"coefficient":[3],"(MIC)":[4],"has":[5],"been":[6],"proposed":[7],"to":[8,24,48,91],"discover":[9],"relationships":[10],"and":[11,33,53,74,115],"associations":[12],"between":[13],"pairs":[14],"of":[15,55,77],"variables.":[16],"It":[17],"poses":[18],"significant":[19],"challenges":[20],"for":[21],"bioinformatics":[22],"scientists":[23],"accelerate":[25],"the":[26,50,56,75,82,87,113],"MIC":[27,57],"calculation,":[28],"especially":[29],"in":[30],"genome":[31],"sequencing":[32],"biological":[34,63],"annotations.":[35],"In":[36],"this":[37],"paper,":[38],"we":[39,85],"explore":[40],"a":[41,104],"parallel":[42,101],"approach":[43],"which":[44],"uses":[45],"MapReduce":[46,78],"framework":[47],"improve":[49],"computing":[51],"efficiency":[52],"throughput":[54],"computation.":[58],"acceleration":[60,83],"system":[61],"includes":[62],"data":[64],"storage":[65],"on":[66,81],"HDFS,":[67],"preprocessing":[68],"algorithms,":[69],"distributed":[70],"memory":[71],"cache":[72],"mechanism,":[73],"partition":[76],"jobs.":[79],"Based":[80],"approach,":[84],"extend":[86],"traditional":[88],"two-variable":[89],"algorithm":[90,110],"multiple":[92],"variables":[93],"algorithm.":[94],"experimental":[96],"results":[97],"show":[98],"that":[99],"our":[100],"solution":[102],"provides":[103],"linear":[105],"speedup":[106],"comparing":[107],"with":[108],"original":[109],"without":[111],"affecting":[112],"correctness":[114],"sensitivity.":[116]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":2}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
