{"id":"https://openalex.org/W2343293893","doi":"https://doi.org/10.1109/tcbb.2016.2515594","title":"Sorting Circular Permutations by Super Short Reversals","display_name":"Sorting Circular Permutations by Super Short Reversals","publication_year":2016,"publication_date":"2016-01-07","ids":{"openalex":"https://openalex.org/W2343293893","doi":"https://doi.org/10.1109/tcbb.2016.2515594","mag":"2343293893","pmid":"https://pubmed.ncbi.nlm.nih.gov/26761858"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2016.2515594","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2016.2515594","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://hdl.handle.net/20.500.12733/8289","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047066921","display_name":"Gustavo Rodrigues Galv\u00e3o","orcid":"https://orcid.org/0000-0001-6069-1147"},"institutions":[{"id":"https://openalex.org/I129975664","display_name":"Albert Einstein College of Medicine","ror":"https://ror.org/05cf8a891","country_code":"US","type":"education","lineage":["https://openalex.org/I129975664","https://openalex.org/I4210112371"]},{"id":"https://openalex.org/I181391015","display_name":"Universidade Estadual de Campinas (UNICAMP)","ror":"https://ror.org/04wffgt70","country_code":"BR","type":"education","lineage":["https://openalex.org/I181391015"]}],"countries":["BR","US"],"is_corresponding":false,"raw_author_name":"Gustavo Rodrigues Galvao","raw_affiliation_strings":["Institute of Computing, University of Campinas, Brazil","IC - Institute of Computing [Campinas] (Instituto de Computa\u00e7\u00e3o (IC) Universidade Estadual de Campinas (UNICAMP) Avenida Albert Einstein, 1251 Caixa Postal 6176 13084-971 Campinas, SP - Br\u00e9sil)"],"raw_orcid":"https://orcid.org/0000-0001-6069-1147","affiliations":[{"raw_affiliation_string":"Institute of Computing, University of Campinas, Brazil","institution_ids":["https://openalex.org/I181391015"]},{"raw_affiliation_string":"IC - Institute of Computing [Campinas] (Instituto de Computa\u00e7\u00e3o (IC) Universidade Estadual de Campinas (UNICAMP) Avenida Albert Einstein, 1251 Caixa Postal 6176 13084-971 Campinas, SP - Br\u00e9sil)","institution_ids":["https://openalex.org/I181391015","https://openalex.org/I129975664"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047766466","display_name":"Christian Baudet","orcid":"https://orcid.org/0000-0002-9187-6512"},"institutions":[{"id":"https://openalex.org/I100532134","display_name":"Universit\u00e9 Claude Bernard Lyon 1","ror":"https://ror.org/029brtt94","country_code":"FR","type":"education","lineage":["https://openalex.org/I100532134","https://openalex.org/I203339264"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210125048","display_name":"Centre de Recherche en Canc\u00e9rologie de Lyon","ror":"https://ror.org/02mgw3155","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I154526488","https://openalex.org/I203339264","https://openalex.org/I4210096427","https://openalex.org/I4210105738","https://openalex.org/I4210125048"]},{"id":"https://openalex.org/I4210135640","display_name":"Laboratoire de Biom\u00e9trie et Biologie Evolutive","ror":"https://ror.org/03skt0t88","country_code":"FR","type":"facility","lineage":["https://openalex.org/I100532134","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I203339264","https://openalex.org/I4210100596","https://openalex.org/I4210104684","https://openalex.org/I4210107625","https://openalex.org/I4210135640"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Christian Baudet","raw_affiliation_strings":["Cancer Research Center of Lyon, France","Laboratoire Biom\u00e9trie et Biologie Evolutive, Universit\u00e9 de Lyon, Universit\u00e9 Lyon 1, CNRS, Villeurbanne UMR5558, France","ERABLE - Equipe de recherche europ\u00e9enne en algorithmique et biologie formelle et exp\u00e9rimentale (Universit\u00e9 Claude Bernard (Lyon 1), \r\nCampus DOUA\r\n43, Boulevard du 11 Novembre 1918\r\n69622 Villeurbanne cedex - France)","Baobab (LBBE\r\n43 Bld du 11 Novembre 1918 69622 VILLEURBANNE CEDEX - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Research Center of Lyon, France","institution_ids":["https://openalex.org/I4210125048"]},{"raw_affiliation_string":"Laboratoire Biom\u00e9trie et Biologie Evolutive, Universit\u00e9 de Lyon, Universit\u00e9 Lyon 1, CNRS, Villeurbanne UMR5558, France","institution_ids":["https://openalex.org/I4210135640","https://openalex.org/I100532134","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"ERABLE - Equipe de recherche europ\u00e9enne en algorithmique et biologie formelle et exp\u00e9rimentale (Universit\u00e9 Claude Bernard (Lyon 1), \r\nCampus DOUA\r\n43, Boulevard du 11 Novembre 1918\r\n69622 Villeurbanne cedex - France)","institution_ids":["https://openalex.org/I100532134"]},{"raw_affiliation_string":"Baobab (LBBE\r\n43 Bld du 11 Novembre 1918 69622 VILLEURBANNE CEDEX - France)","institution_ids":["https://openalex.org/I4210135640"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042140271","display_name":"Zanoni Dias","orcid":"https://orcid.org/0000-0003-3333-6822"},"institutions":[{"id":"https://openalex.org/I129975664","display_name":"Albert Einstein College of Medicine","ror":"https://ror.org/05cf8a891","country_code":"US","type":"education","lineage":["https://openalex.org/I129975664","https://openalex.org/I4210112371"]},{"id":"https://openalex.org/I181391015","display_name":"Universidade Estadual de Campinas (UNICAMP)","ror":"https://ror.org/04wffgt70","country_code":"BR","type":"education","lineage":["https://openalex.org/I181391015"]}],"countries":["BR","US"],"is_corresponding":false,"raw_author_name":"Zanoni Dias","raw_affiliation_strings":["Institute of Computing, University of Campinas, Brazil","IC - Institute of Computing [Campinas] (Instituto de Computa\u00e7\u00e3o (IC) Universidade Estadual de Campinas (UNICAMP) Avenida Albert Einstein, 1251 Caixa Postal 6176 13084-971 Campinas, SP - Br\u00e9sil)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computing, University of Campinas, Brazil","institution_ids":["https://openalex.org/I181391015"]},{"raw_affiliation_string":"IC - Institute of Computing [Campinas] (Instituto de Computa\u00e7\u00e3o (IC) Universidade Estadual de Campinas (UNICAMP) Avenida Albert Einstein, 1251 Caixa Postal 6176 13084-971 Campinas, SP - Br\u00e9sil)","institution_ids":["https://openalex.org/I181391015","https://openalex.org/I129975664"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":1.4813,"has_fulltext":false,"cited_by_count":11,"citation_normalized_percentile":{"value":0.84930086,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"14","issue":"3","first_page":"620","last_page":"633"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9754999876022339,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/permutation","display_name":"Permutation (music)","score":0.7527561187744141},{"id":"https://openalex.org/keywords/sorting","display_name":"Sorting","score":0.7381007671356201},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.7217029333114624},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5730587840080261},{"id":"https://openalex.org/keywords/time-complexity","display_name":"Time complexity","score":0.4938279092311859},{"id":"https://openalex.org/keywords/polynomial","display_name":"Polynomial","score":0.47695839405059814},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.47207096219062805},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.45505955815315247},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4519491195678711},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3924548327922821},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.21007010340690613},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20766031742095947},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08143997192382812},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.08054178953170776}],"concepts":[{"id":"https://openalex.org/C21308566","wikidata":"https://www.wikidata.org/wiki/Q7169365","display_name":"Permutation (music)","level":2,"score":0.7527561187744141},{"id":"https://openalex.org/C111696304","wikidata":"https://www.wikidata.org/wiki/Q2303697","display_name":"Sorting","level":2,"score":0.7381007671356201},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.7217029333114624},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5730587840080261},{"id":"https://openalex.org/C311688","wikidata":"https://www.wikidata.org/wiki/Q2393193","display_name":"Time complexity","level":2,"score":0.4938279092311859},{"id":"https://openalex.org/C90119067","wikidata":"https://www.wikidata.org/wiki/Q43260","display_name":"Polynomial","level":2,"score":0.47695839405059814},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.47207096219062805},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.45505955815315247},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4519491195678711},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3924548327922821},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.21007010340690613},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20766031742095947},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08143997192382812},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.08054178953170776},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015007","descriptor_name":"Yersinia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015007","descriptor_name":"Yersinia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015007","descriptor_name":"Yersinia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015321","descriptor_name":"Gene Rearrangement","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015321","descriptor_name":"Gene Rearrangement","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015321","descriptor_name":"Gene Rearrangement","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020563","descriptor_name":"Gammaproteobacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020563","descriptor_name":"Gammaproteobacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020563","descriptor_name":"Gammaproteobacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1109/tcbb.2016.2515594","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2016.2515594","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26761858","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26761858","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null},{"id":"pmh:oai:https://www.repositorio.unicamp.br/:1266288","is_oa":true,"landing_page_url":"https://hdl.handle.net/20.500.12733/8289","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"reponame:Reposit\u00f3rio da Produ\u00e7\u00e3o Cient\u00edfica e Intelectual da Unicamp","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:HAL:hal-01317003v1","is_oa":true,"landing_page_url":"https://inria.hal.science/hal-01317003","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://ieeexplore.ieee.org/xpl/articleDetails.jsp?arnumber=7374688","raw_type":"Journal articles"}],"best_oa_location":{"id":"pmh:oai:https://www.repositorio.unicamp.br/:1266288","is_oa":true,"landing_page_url":"https://hdl.handle.net/20.500.12733/8289","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"reponame:Reposit\u00f3rio da Produ\u00e7\u00e3o Cient\u00edfica e Intelectual da Unicamp","raw_type":"info:eu-repo/semantics/publishedVersion"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1263407861","display_name":null,"funder_award_id":"306730/2012-0","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"},{"id":"https://openalex.org/G1561441403","display_name":null,"funder_award_id":"#2014/04718-6","funder_id":"https://openalex.org/F4320321091","funder_display_name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior"},{"id":"https://openalex.org/G3534718230","display_name":null,"funder_award_id":"483370/2013-4","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"},{"id":"https://openalex.org/G5363377922","display_name":null,"funder_award_id":"FP7/2007-2013","funder_id":"https://openalex.org/F4320334678","funder_display_name":"European Research Council"},{"id":"https://openalex.org/G582256466","display_name":null,"funder_award_id":"BLAN08-1335497","funder_id":"https://openalex.org/F4320311644","funder_display_name":"MultiCare Institute for Research and Innovation"},{"id":"https://openalex.org/G6351462369","display_name":null,"funder_award_id":"[247073]10","funder_id":"https://openalex.org/F4320334678","funder_display_name":"European Research Council"},{"id":"https://openalex.org/G8167852807","display_name":"Combinatorial exploration of the molecular landscape and evolution of intimate species relations","funder_award_id":"ANR-08-BLAN-0293","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G8711810450","display_name":null,"funder_award_id":"477692/2012-5","funder_id":"https://openalex.org/F4320322025","funder_display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico"}],"funders":[{"id":"https://openalex.org/F4320311644","display_name":"MultiCare Institute for Research and Innovation","ror":"https://ror.org/04g0bt697"},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320320997","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","ror":"https://ror.org/02ddkpn78"},{"id":"https://openalex.org/F4320321091","display_name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","ror":"https://ror.org/00x0ma614"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"},{"id":"https://openalex.org/F4320334678","display_name":"European Research Council","ror":"https://ror.org/0472cxd90"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W74509308","https://openalex.org/W569294424","https://openalex.org/W994934169","https://openalex.org/W1912134269","https://openalex.org/W1966872307","https://openalex.org/W1990321397","https://openalex.org/W1990676812","https://openalex.org/W1991909065","https://openalex.org/W2028889910","https://openalex.org/W2041257508","https://openalex.org/W2072229071","https://openalex.org/W2082505684","https://openalex.org/W2096041973","https://openalex.org/W2097706568","https://openalex.org/W2100412820","https://openalex.org/W2102344709","https://openalex.org/W2107383419","https://openalex.org/W2108621157","https://openalex.org/W2108998942","https://openalex.org/W2132247062","https://openalex.org/W2144629185","https://openalex.org/W2165627817","https://openalex.org/W2244539358","https://openalex.org/W3199943451","https://openalex.org/W4213205621","https://openalex.org/W4231529020","https://openalex.org/W4299995088","https://openalex.org/W6674647444"],"related_works":["https://openalex.org/W4312203868","https://openalex.org/W2739612537","https://openalex.org/W2069013776","https://openalex.org/W2038264393","https://openalex.org/W2059637021","https://openalex.org/W2349174696","https://openalex.org/W2378282666","https://openalex.org/W2951352292","https://openalex.org/W4298854296","https://openalex.org/W1774334694"],"abstract_inverted_index":{"We":[0],"consider":[1],"the":[2,31,40,50,55,80,93],"problem":[3,21,36],"of":[4,15,34,58,68,72],"sorting":[5],"a":[6,20,101],"circular":[7],"permutation":[8],"by":[9],"super":[10,113],"short":[11,109,114],"reversals":[12,14],"(i.e.,":[13],"length":[16],"at":[17],"most":[18],"2),":[19],"that":[22],"finds":[23],"application":[24],"in":[25,83,96],"comparative":[26],"genomics.":[27],"Polynomial-time":[28],"solutions":[29],"to":[30,54,87],"unsigned":[32],"version":[33,42,57],"this":[35,46,59,97],"are":[37],"known,":[38],"but":[39],"signed":[41,56],"remained":[43],"open.":[44],"In":[45],"paper,":[47,98],"we":[48,62,99],"present":[49,100],"first":[51],"polynomial-time":[52],"solution":[53],"problem.":[60],"Moreover,":[61],"perform":[63],"experiments":[64],"for":[65,104],"inferring":[66],"phylogenies":[67,81],"two":[69],"different":[70],"groups":[71],"bacterial":[73],"species":[74],"and":[75],"compare":[76],"our":[77],"results":[78],"with":[79],"presented":[82],"previous":[84],"works.":[85],"Finally,":[86],"facilitate":[88],"phylogenetic":[89,106],"studies":[90],"based":[91],"on":[92],"methods":[94],"studied":[95],"web":[102],"tool":[103],"rearrangement-based":[105],"inference":[107],"using":[108],"operations,":[110],"such":[111],"as":[112],"reversals.":[115]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2018,"cited_by_count":3},{"year":2016,"cited_by_count":2}],"updated_date":"2026-06-20T22:02:38.213706","created_date":"2025-10-10T00:00:00"}
