{"id":"https://openalex.org/W2342523820","doi":"https://doi.org/10.1109/tcbb.2015.2511767","title":"MDTE DB: A Database for MicroRNAs Derived from Transposable Element","display_name":"MDTE DB: A Database for MicroRNAs Derived from Transposable Element","publication_year":2015,"publication_date":"2015-12-23","ids":{"openalex":"https://openalex.org/W2342523820","doi":"https://doi.org/10.1109/tcbb.2015.2511767","mag":"2342523820","pmid":"https://pubmed.ncbi.nlm.nih.gov/28055900"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2015.2511767","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2015.2511767","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040944784","display_name":"Guanyun Wei","orcid":null},"institutions":[{"id":"https://openalex.org/I152031979","display_name":"Nanjing Normal University","ror":"https://ror.org/036trcv74","country_code":"CN","type":"education","lineage":["https://openalex.org/I152031979"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Guanyun Wei","raw_affiliation_strings":["Laboratory for Comparative Genomics and Bioinformatics & Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Science, Nanjing Normal University, Nanjing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Comparative Genomics and Bioinformatics & Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Science, Nanjing Normal University, Nanjing, China","institution_ids":["https://openalex.org/I152031979"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011111068","display_name":"Sheng Qin","orcid":"https://orcid.org/0000-0003-2916-1871"},"institutions":[{"id":"https://openalex.org/I4210096899","display_name":"Jiangsu University of Science and Technology","ror":"https://ror.org/00tyjp878","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210096899"]},{"id":"https://openalex.org/I4210139005","display_name":"Sericultural Research Institute","ror":"https://ror.org/0464wn274","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210127390","https://openalex.org/I4210138501","https://openalex.org/I4210139005","https://openalex.org/I4210151987"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Sheng Qin","raw_affiliation_strings":["School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu, China","Sericultural Research Institute, Chinese Academy of Agricultural Science Zhenjiang, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biotechnology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu, China","institution_ids":["https://openalex.org/I4210096899"]},{"raw_affiliation_string":"Sericultural Research Institute, Chinese Academy of Agricultural Science Zhenjiang, Jiangsu, China","institution_ids":["https://openalex.org/I4210139005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100431499","display_name":"Wenjuan Li","orcid":"https://orcid.org/0000-0003-3922-4709"},"institutions":[{"id":"https://openalex.org/I152031979","display_name":"Nanjing Normal University","ror":"https://ror.org/036trcv74","country_code":"CN","type":"education","lineage":["https://openalex.org/I152031979"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wenjuan Li","raw_affiliation_strings":["Laboratory for Comparative Genomics and Bioinformatics & Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Science, Nanjing Normal University, Nanjing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Comparative Genomics and Bioinformatics & Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Science, Nanjing Normal University, Nanjing, China","institution_ids":["https://openalex.org/I152031979"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100443532","display_name":"Liming Chen","orcid":"https://orcid.org/0000-0002-7782-9824"},"institutions":[{"id":"https://openalex.org/I76569877","display_name":"Southeast University","ror":"https://ror.org/04ct4d772","country_code":"CN","type":"education","lineage":["https://openalex.org/I76569877"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liming Chen","raw_affiliation_strings":["Key Laboratory of Developmental Genes and Human Disease, Institute of Life Science, Southeast University, Nanjing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Developmental Genes and Human Disease, Institute of Life Science, Southeast University, Nanjing, China","institution_ids":["https://openalex.org/I76569877"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101694046","display_name":"Fei Ma","orcid":"https://orcid.org/0000-0002-5869-7061"},"institutions":[{"id":"https://openalex.org/I152031979","display_name":"Nanjing Normal University","ror":"https://ror.org/036trcv74","country_code":"CN","type":"education","lineage":["https://openalex.org/I152031979"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fei Ma","raw_affiliation_strings":["Laboratory for Comparative Genomics and Bioinformatics & Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Science, Nanjing Normal University, Nanjing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory for Comparative Genomics and Bioinformatics & Jiangsu Key Laboratory for Biodiversity and Biotechnology, College of Life Science, Nanjing Normal University, Nanjing, China","institution_ids":["https://openalex.org/I152031979"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5040944784"],"corresponding_institution_ids":["https://openalex.org/I152031979"],"apc_list":null,"apc_paid":null,"fwci":1.0313,"has_fulltext":false,"cited_by_count":43,"citation_normalized_percentile":{"value":0.84583131,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"13","issue":"6","first_page":"1155","last_page":"1160"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10434","display_name":"Chromosomal and Genetic Variations","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9857000112533569,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transposable-element","display_name":"Transposable element","score":0.9061152935028076},{"id":"https://openalex.org/keywords/element","display_name":"Element (criminal law)","score":0.5990099310874939},{"id":"https://openalex.org/keywords/dna-transposable-elements","display_name":"DNA Transposable Elements","score":0.4650045335292816},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.4330575466156006},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3726896047592163},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35351407527923584},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.26755452156066895},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2544308304786682},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.12663984298706055},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.06675752997398376},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.06261864304542542}],"concepts":[{"id":"https://openalex.org/C4918238","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"Transposable element","level":4,"score":0.9061152935028076},{"id":"https://openalex.org/C200288055","wikidata":"https://www.wikidata.org/wiki/Q2621792","display_name":"Element (criminal law)","level":2,"score":0.5990099310874939},{"id":"https://openalex.org/C2910146623","wikidata":"https://www.wikidata.org/wiki/Q121438","display_name":"DNA Transposable Elements","level":5,"score":0.4650045335292816},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.4330575466156006},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3726896047592163},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35351407527923584},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26755452156066895},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2544308304786682},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.12663984298706055},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.06675752997398376},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.06261864304542542},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/tcbb.2015.2511767","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2015.2511767","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28055900","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28055900","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8673070596","display_name":null,"funder_award_id":"31572324","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320327518","display_name":"Priority Academic Program Development of Jiangsu Higher Education Institutions","ror":null}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":51,"referenced_works":["https://openalex.org/W121421619","https://openalex.org/W1579605247","https://openalex.org/W1608532100","https://openalex.org/W1838885635","https://openalex.org/W1956319726","https://openalex.org/W1964486213","https://openalex.org/W1969763379","https://openalex.org/W1972791442","https://openalex.org/W1972951765","https://openalex.org/W1975001696","https://openalex.org/W1975463221","https://openalex.org/W1979468478","https://openalex.org/W1988539724","https://openalex.org/W1989410392","https://openalex.org/W1992846003","https://openalex.org/W1993570044","https://openalex.org/W1996601092","https://openalex.org/W2010104346","https://openalex.org/W2026402743","https://openalex.org/W2029166424","https://openalex.org/W2033882896","https://openalex.org/W2034468174","https://openalex.org/W2035636775","https://openalex.org/W2042086471","https://openalex.org/W2047853840","https://openalex.org/W2050878024","https://openalex.org/W2060122884","https://openalex.org/W2060511648","https://openalex.org/W2061329976","https://openalex.org/W2071501400","https://openalex.org/W2072972020","https://openalex.org/W2076092946","https://openalex.org/W2077327925","https://openalex.org/W2093093463","https://openalex.org/W2098762465","https://openalex.org/W2102534496","https://openalex.org/W2122910044","https://openalex.org/W2127407961","https://openalex.org/W2128674168","https://openalex.org/W2131581981","https://openalex.org/W2133584602","https://openalex.org/W2134629862","https://openalex.org/W2138664009","https://openalex.org/W2147835141","https://openalex.org/W2154328479","https://openalex.org/W2162048779","https://openalex.org/W2163091657","https://openalex.org/W2168148721","https://openalex.org/W2168909179","https://openalex.org/W4292239814","https://openalex.org/W6790425969"],"related_works":["https://openalex.org/W1831405499","https://openalex.org/W4402803661","https://openalex.org/W2131380093","https://openalex.org/W2005686029","https://openalex.org/W4385457713","https://openalex.org/W2164152191","https://openalex.org/W2026307780","https://openalex.org/W4402805749","https://openalex.org/W4402804424","https://openalex.org/W4385457838"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"are":[2],"crucial":[3],"regulators":[4],"of":[5,15,26,42,83],"gene":[6],"expression":[7],"at":[8],"post-transcriptional":[9],"level.":[10],"Understanding":[11],"origin":[12,41,80],"and":[13,29,68,81],"evolution":[14,82],"miRNAs":[16,28,49],"will":[17],"improve":[18],"the":[19,24,40,46,79],"current":[20],"available":[21],"algorithm":[22],"for":[23,39,65,77],"prediction":[25],"novel":[27],"their":[30],"functions.":[31],"Transposable":[32],"elements":[33],"(TEs)":[34],"provide":[35],"a":[36,58,74],"natural":[37],"mechanism":[38],"new":[43],"miRNAs.":[44,84],"In":[45],"paper,":[47],"2,583":[48],"derived":[50],"from":[51],"TEs":[52],"(MDTEs)":[53],"were":[54],"collected":[55],"to":[56],"construct":[57],"database":[59,62,72],"named":[60],"MDTE":[61],"(MDTE":[63],"DB)":[64],"storing,":[66],"searching,":[67],"analyzing":[69],"MDTEs.":[70],"The":[71],"provides":[73],"convenient":[75],"source":[76],"studying":[78],"Database":[85],"URL:http://bioinf.njnu.edu.cn/MDTE/MDTE.php.":[86]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":15},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-05-16T08:24:45.110214","created_date":"2025-10-10T00:00:00"}