{"id":"https://openalex.org/W2414529419","doi":"https://doi.org/10.1109/tcbb.2015.2465957","title":"An Adaptive Hybrid Algorithm for Global Network Alignment","display_name":"An Adaptive Hybrid Algorithm for Global Network Alignment","publication_year":2015,"publication_date":"2015-08-13","ids":{"openalex":"https://openalex.org/W2414529419","doi":"https://doi.org/10.1109/tcbb.2015.2465957","mag":"2414529419","pmid":"https://pubmed.ncbi.nlm.nih.gov/27295633"},"language":"en","primary_location":{"id":"doi:10.1109/tcbb.2015.2465957","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2015.2465957","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4922862","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100677765","display_name":"Jiang Xie","orcid":"https://orcid.org/0000-0001-9944-8822"},"institutions":[{"id":"https://openalex.org/I141962983","display_name":"Shanghai University of Engineering Science","ror":"https://ror.org/0557b9y08","country_code":"CN","type":"education","lineage":["https://openalex.org/I141962983"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jiang Xie","raw_affiliation_strings":["School of Computer Engineering and Science, Shanghai University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Engineering and Science, Shanghai University, Shanghai, China","institution_ids":["https://openalex.org/I141962983"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022789707","display_name":"Chaojuan Xiang","orcid":null},"institutions":[{"id":"https://openalex.org/I141962983","display_name":"Shanghai University of Engineering Science","ror":"https://ror.org/0557b9y08","country_code":"CN","type":"education","lineage":["https://openalex.org/I141962983"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chaojuan Xiang","raw_affiliation_strings":["School of Computer Engineering and Science, Shanghai University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Engineering and Science, Shanghai University, Shanghai, China","institution_ids":["https://openalex.org/I141962983"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000818065","display_name":"Jin Ma","orcid":"https://orcid.org/0000-0002-9912-2520"},"institutions":[{"id":"https://openalex.org/I141962983","display_name":"Shanghai University of Engineering Science","ror":"https://ror.org/0557b9y08","country_code":"CN","type":"education","lineage":["https://openalex.org/I141962983"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jin Ma","raw_affiliation_strings":["School of Computer Engineering and Science, Shanghai University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Engineering and Science, Shanghai University, Shanghai, China","institution_ids":["https://openalex.org/I141962983"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041413671","display_name":"Jun Jie Tan","orcid":"https://orcid.org/0000-0002-7027-6657"},"institutions":[{"id":"https://openalex.org/I141962983","display_name":"Shanghai University of Engineering Science","ror":"https://ror.org/0557b9y08","country_code":"CN","type":"education","lineage":["https://openalex.org/I141962983"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Tan","raw_affiliation_strings":["School of Computer Engineering and Science, Shanghai University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Engineering and Science, Shanghai University, Shanghai, China","institution_ids":["https://openalex.org/I141962983"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100660633","display_name":"Tieqiao Wen","orcid":"https://orcid.org/0000-0001-7986-8475"},"institutions":[{"id":"https://openalex.org/I113940042","display_name":"Shanghai University","ror":"https://ror.org/006teas31","country_code":"CN","type":"education","lineage":["https://openalex.org/I113940042"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tieqiao Wen","raw_affiliation_strings":["School of Life Sciences, Shanghai University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"School of Life Sciences, Shanghai University, Shanghai, China","institution_ids":["https://openalex.org/I113940042"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021871320","display_name":"Jinzhi Lei","orcid":"https://orcid.org/0000-0002-2670-6760"},"institutions":[{"id":"https://openalex.org/I99065089","display_name":"Tsinghua University","ror":"https://ror.org/03cve4549","country_code":"CN","type":"education","lineage":["https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinzhi Lei","raw_affiliation_strings":["Zhou PeiYuan Center for Applied Mathematics, MOE Key Laboratory of Bioinformatics, Tsinghua University, Beijing, China"],"affiliations":[{"raw_affiliation_string":"Zhou PeiYuan Center for Applied Mathematics, MOE Key Laboratory of Bioinformatics, Tsinghua University, Beijing, China","institution_ids":["https://openalex.org/I99065089"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076311980","display_name":"Qing Nie","orcid":"https://orcid.org/0000-0002-8804-3368"},"institutions":[{"id":"https://openalex.org/I141962983","display_name":"Shanghai University of Engineering Science","ror":"https://ror.org/0557b9y08","country_code":"CN","type":"education","lineage":["https://openalex.org/I141962983"]},{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Qing Nie","raw_affiliation_strings":["Department of Mathematics, the Center for Mathematical and Computational Biology, and the Center for Complex Biological Systems, University of California-Irvine, Irvine, CA","School of Computer Engineering and Science, Shanghai University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, the Center for Mathematical and Computational Biology, and the Center for Complex Biological Systems, University of California-Irvine, Irvine, CA","institution_ids":["https://openalex.org/I204250578"]},{"raw_affiliation_string":"School of Computer Engineering and Science, Shanghai University, Shanghai, China","institution_ids":["https://openalex.org/I141962983"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5100677765"],"corresponding_institution_ids":["https://openalex.org/I141962983"],"apc_list":null,"apc_paid":null,"fwci":0.6037,"has_fulltext":false,"cited_by_count":14,"citation_normalized_percentile":{"value":0.70461922,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"13","issue":"3","first_page":"483","last_page":"493"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9873999953269958,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9674999713897705,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6257168650627136},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.6015848517417908},{"id":"https://openalex.org/keywords/greedy-algorithm","display_name":"Greedy algorithm","score":0.5159400105476379},{"id":"https://openalex.org/keywords/node","display_name":"Node (physics)","score":0.49281027913093567}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6257168650627136},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.6015848517417908},{"id":"https://openalex.org/C51823790","wikidata":"https://www.wikidata.org/wiki/Q504353","display_name":"Greedy algorithm","level":2,"score":0.5159400105476379},{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.49281027913093567},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C66938386","wikidata":"https://www.wikidata.org/wiki/Q633538","display_name":"Structural engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1109/tcbb.2015.2465957","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tcbb.2015.2465957","pdf_url":null,"source":{"id":"https://openalex.org/S36029991","display_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","issn_l":"1545-5963","issn":["1545-5963","1557-9964","2374-0043"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM Transactions on Computational Biology and Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27295633","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27295633","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE/ACM transactions on computational biology and bioinformatics","raw_type":null},{"id":"pmh:ark:/13030/qt1sd159n2","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:escholarship.org:ark:/13030/qt1sd159n2","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/1sd159n2","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE Transactions on Computational Biology and Bioinformatics, vol 13, iss 3","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4922862","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4922862","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE/ACM Trans Comput Biol Bioinform","raw_type":"Text"}],"best_oa_location":{"id":"pmh:oai:pubmedcentral.nih.gov:4922862","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4922862","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"IEEE/ACM Trans Comput Biol Bioinform","raw_type":"Text"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1634719776","display_name":null,"funder_award_id":"P50GM76516","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3009978940","display_name":null,"funder_award_id":"SRFDP 20113108120022","funder_id":"https://openalex.org/F4320336024","funder_display_name":"Specialized Research Fund for the Doctoral Program of Higher Education of China"}],"funders":[{"id":"https://openalex.org/F4320306491","display_name":"Smith Richardson Foundation","ror":"https://ror.org/01ma57r88"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320336024","display_name":"Specialized Research Fund for the Doctoral Program of Higher Education of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W118615843","https://openalex.org/W1518994209","https://openalex.org/W1984209790","https://openalex.org/W1984249061","https://openalex.org/W1995907191","https://openalex.org/W2035036132","https://openalex.org/W2036265926","https://openalex.org/W2046835346","https://openalex.org/W2055043387","https://openalex.org/W2056124433","https://openalex.org/W2056903220","https://openalex.org/W2057885377","https://openalex.org/W2062533676","https://openalex.org/W2065304353","https://openalex.org/W2091931698","https://openalex.org/W2092904196","https://openalex.org/W2092986233","https://openalex.org/W2103017472","https://openalex.org/W2104009289","https://openalex.org/W2106202847","https://openalex.org/W2116447934","https://openalex.org/W2117540545","https://openalex.org/W2122961704","https://openalex.org/W2127957894","https://openalex.org/W2130237248","https://openalex.org/W2135445920","https://openalex.org/W2136316164","https://openalex.org/W2137648512","https://openalex.org/W2142365031","https://openalex.org/W2142965177","https://openalex.org/W2153929049","https://openalex.org/W2155834877","https://openalex.org/W2156737316","https://openalex.org/W2167222948","https://openalex.org/W2168474259","https://openalex.org/W2222512263","https://openalex.org/W2243244968","https://openalex.org/W2296148711","https://openalex.org/W2605068739","https://openalex.org/W4236236547","https://openalex.org/W4252706339","https://openalex.org/W6680870402","https://openalex.org/W6690731163"],"related_works":["https://openalex.org/W4387497383","https://openalex.org/W3183948672","https://openalex.org/W3173606202","https://openalex.org/W3110381201","https://openalex.org/W2948807893","https://openalex.org/W2899084033","https://openalex.org/W2778153218","https://openalex.org/W2758277628","https://openalex.org/W2748952813","https://openalex.org/W1531601525"],"abstract_inverted_index":{"It":[0],"is":[1,68,170],"challenging":[2],"to":[3,25,113,143],"obtain":[4],"reliable":[5],"and":[6,17,43,79,85,107,124,159,172,190],"optimal":[7],"mapping":[8,121],"between":[9,122,178],"networks":[10,180],"for":[11,48,89],"alignment":[12,51],"algorithms":[13],"when":[14],"both":[15,187],"nodal":[16],"topological":[18,92],"structures":[19],"are":[20,193],"taken":[21],"into":[22],"consideration":[23],"due":[24],"the":[26,39,44,49,91,95,129,133,167,183,188,191],"underlying":[27],"NP-hard":[28],"problem.":[29],"Here,":[30],"we":[31],"introduce":[32],"an":[33,83],"adaptive":[34,84,168],"hybrid":[35,57],"algorithm":[36,42,46,131],"that":[37],"combines":[38],"classical":[40],"Hungarian":[41],"Greedy":[45],"(HGA)":[47],"global":[50],"of":[52,61,110,136,174,186],"biomolecular":[53],"networks.":[54,96],"With":[55],"this":[56],"algorithm,":[58],"every":[59],"pair":[60],"nodes":[62,189],"with":[63],"one":[64],"in":[65,94,116,181],"each":[66],"network":[67],"first":[69],"aligned":[70,179],"based":[71],"on":[72,162],"node":[73],"information":[74],"(e.g.,":[75],"their":[76],"sequence":[77],"attributes)":[78],"then":[80],"followed":[81],"by":[82,128,146],"convergent":[86],"iteration":[87],"procedure":[88],"aligning":[90],"connections":[93,192],"For":[97],"four":[98],"well-studied":[99],"protein":[100],"interaction":[101],"networks,":[102],"i.e.,":[103],"C.elegans,":[104],"yeast,":[105],"D.melanogaster,":[106],"human,":[108],"applications":[109],"HGA":[111,169],"lead":[112],"improved":[114],"alignments":[115],"acceptable":[117],"running":[118],"time.":[119],"The":[120],"yeast":[123],"human":[125],"PINs":[126],"obtained":[127,145],"new":[130],"has":[132,153],"largest":[134],"value":[135],"common":[137],"gene":[138],"ontology":[139],"(GO)":[140],"terms":[141],"compared":[142],"those":[144],"other":[147,164],"existing":[148],"algorithms,":[149],"while":[150],"it":[151],"still":[152],"lower":[154],"Mean":[155],"normalized":[156],"entropy":[157],"(MNE)":[158],"good":[160,176],"performances":[161],"several":[163],"measures.":[165],"Overall,":[166],"effective":[171],"capable":[173],"providing":[175],"mappings":[177],"which":[182],"biological":[184],"properties":[185],"important.":[194]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
