{"id":"https://openalex.org/W4206475849","doi":"https://doi.org/10.1109/tbme.2021.3139992","title":"Application of Intraoperative Mass Spectrometry and Data Analytics for Oncological Margin Detection, A Review","display_name":"Application of Intraoperative Mass Spectrometry and Data Analytics for Oncological Margin Detection, A Review","publication_year":2022,"publication_date":"2022-01-04","ids":{"openalex":"https://openalex.org/W4206475849","doi":"https://doi.org/10.1109/tbme.2021.3139992","pmid":"https://pubmed.ncbi.nlm.nih.gov/34982670"},"language":"en","primary_location":{"id":"doi:10.1109/tbme.2021.3139992","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tbme.2021.3139992","pdf_url":null,"source":{"id":"https://openalex.org/S5240358","display_name":"IEEE Transactions on Biomedical Engineering","issn_l":"0018-9294","issn":["0018-9294","1558-2531"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Biomedical Engineering","raw_type":"journal-article"},"type":"review","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022874103","display_name":"Alice Santilli","orcid":"https://orcid.org/0000-0001-5206-1727"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Alice Maria Leondina Santilli","raw_affiliation_strings":["School of Computing, Queen&#x2019;s University, Kingston, ON, Canada"],"raw_orcid":"https://orcid.org/0000-0001-5206-1727","affiliations":[{"raw_affiliation_string":"School of Computing, Queen&#x2019;s University, Kingston, ON, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026941433","display_name":"Kevin Ren","orcid":"https://orcid.org/0000-0002-3841-591X"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Kevin Ren","raw_affiliation_strings":["Department of Pathology, Queen&#x2019;s University, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Queen&#x2019;s University, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055976745","display_name":"Richard D. Oleschuk","orcid":"https://orcid.org/0000-0003-2783-7532"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Richard Oleschuk","raw_affiliation_strings":["Department of Chemistry, Queen&#x2019;s University, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Chemistry, Queen&#x2019;s University, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101661555","display_name":"Martin Kaufmann","orcid":"https://orcid.org/0000-0003-0163-2205"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Martin Kaufmann","raw_affiliation_strings":["Department of Molecular Sciences, Queen&#x2019;s University, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Sciences, Queen&#x2019;s University, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108724892","display_name":"John F. Rudan","orcid":null},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"John Rudan","raw_affiliation_strings":["Department of Surgery, Queen&#x2019;s University, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Surgery, Queen&#x2019;s University, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084753910","display_name":"G\u00e1bor Fichtinger","orcid":"https://orcid.org/0000-0002-6354-262X"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Gabor Fichtinger","raw_affiliation_strings":["School of Computing, Queen&#x2019;s University, Canada"],"raw_orcid":"https://orcid.org/0000-0002-6354-262X","affiliations":[{"raw_affiliation_string":"School of Computing, Queen&#x2019;s University, Canada","institution_ids":["https://openalex.org/I204722609"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040401197","display_name":"Parvin Mousavi","orcid":"https://orcid.org/0000-0002-1630-7379"},"institutions":[{"id":"https://openalex.org/I204722609","display_name":"Queen's University","ror":"https://ror.org/02y72wh86","country_code":"CA","type":"education","lineage":["https://openalex.org/I204722609"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Parvin Mousavi","raw_affiliation_strings":["School of Computing, Queen&#x2019;s University, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing, Queen&#x2019;s University, Canada","institution_ids":["https://openalex.org/I204722609"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I204722609"],"apc_list":null,"apc_paid":null,"fwci":1.2936,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.7638009,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"69","issue":"7","first_page":"2220","last_page":"2232"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.38760000467300415,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.38760000467300415,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.07980000227689743,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11324","display_name":"Spectroscopy Techniques in Biomedical and Chemical Research","score":0.04809999838471413,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/margin","display_name":"Margin (machine learning)","score":0.583465039730072},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.49718692898750305},{"id":"https://openalex.org/keywords/modalities","display_name":"Modalities","score":0.4925842881202698},{"id":"https://openalex.org/keywords/analytics","display_name":"Analytics","score":0.43380460143089294},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.4275054931640625},{"id":"https://openalex.org/keywords/data-extraction","display_name":"Data extraction","score":0.41658177971839905},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3021370768547058},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.1750185191631317},{"id":"https://openalex.org/keywords/medline","display_name":"MEDLINE","score":0.16315943002700806}],"concepts":[{"id":"https://openalex.org/C774472","wikidata":"https://www.wikidata.org/wiki/Q6760393","display_name":"Margin (machine learning)","level":2,"score":0.583465039730072},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.49718692898750305},{"id":"https://openalex.org/C2779903281","wikidata":"https://www.wikidata.org/wiki/Q6888026","display_name":"Modalities","level":2,"score":0.4925842881202698},{"id":"https://openalex.org/C79158427","wikidata":"https://www.wikidata.org/wiki/Q485396","display_name":"Analytics","level":2,"score":0.43380460143089294},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4275054931640625},{"id":"https://openalex.org/C2777466982","wikidata":"https://www.wikidata.org/wiki/Q5227287","display_name":"Data extraction","level":3,"score":0.41658177971839905},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3021370768547058},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.1750185191631317},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.16315943002700806},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C36289849","wikidata":"https://www.wikidata.org/wiki/Q34749","display_name":"Social science","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000072662","descriptor_name":"Margins of Excision","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000072662","descriptor_name":"Margins of Excision","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000072662","descriptor_name":"Margins of Excision","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077488","descriptor_name":"Data Science","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077488","descriptor_name":"Data Science","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077488","descriptor_name":"Data Science","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000601","qualifier_name":"surgery","is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/tbme.2021.3139992","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tbme.2021.3139992","pdf_url":null,"source":{"id":"https://openalex.org/S5240358","display_name":"IEEE Transactions on Biomedical Engineering","issn_l":"0018-9294","issn":["0018-9294","1558-2531"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Biomedical Engineering","raw_type":"journal-article"},{"id":"pmid:34982670","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34982670","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on bio-medical engineering","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320334506","display_name":"Canadian Institutes of Health Research","ror":"https://ror.org/01gavpb45"},{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":87,"referenced_works":["https://openalex.org/W150992930","https://openalex.org/W1936066510","https://openalex.org/W1971606140","https://openalex.org/W1974681473","https://openalex.org/W1980673947","https://openalex.org/W1981924648","https://openalex.org/W1982026768","https://openalex.org/W1989931746","https://openalex.org/W1996136069","https://openalex.org/W2000823862","https://openalex.org/W2003183020","https://openalex.org/W2010004076","https://openalex.org/W2033278243","https://openalex.org/W2034367397","https://openalex.org/W2041830158","https://openalex.org/W2046393687","https://openalex.org/W2055737673","https://openalex.org/W2057274478","https://openalex.org/W2058097864","https://openalex.org/W2064259235","https://openalex.org/W2071344239","https://openalex.org/W2072074442","https://openalex.org/W2078004211","https://openalex.org/W2081676452","https://openalex.org/W2083264163","https://openalex.org/W2086068434","https://openalex.org/W2094588289","https://openalex.org/W2100285267","https://openalex.org/W2102859086","https://openalex.org/W2106034668","https://openalex.org/W2115635542","https://openalex.org/W2116731262","https://openalex.org/W2117854023","https://openalex.org/W2121668219","https://openalex.org/W2139939613","https://openalex.org/W2145305918","https://openalex.org/W2149897989","https://openalex.org/W2153076843","https://openalex.org/W2165268571","https://openalex.org/W2170798597","https://openalex.org/W2276129260","https://openalex.org/W2349960684","https://openalex.org/W2400480887","https://openalex.org/W2400607299","https://openalex.org/W2485351708","https://openalex.org/W2494122440","https://openalex.org/W2505592464","https://openalex.org/W2560973744","https://openalex.org/W2569963183","https://openalex.org/W2588704521","https://openalex.org/W2590077393","https://openalex.org/W2598641350","https://openalex.org/W2611214388","https://openalex.org/W2626112488","https://openalex.org/W2626123383","https://openalex.org/W2635090121","https://openalex.org/W2735987367","https://openalex.org/W2740285884","https://openalex.org/W2747983114","https://openalex.org/W2753124759","https://openalex.org/W2796448929","https://openalex.org/W2798093457","https://openalex.org/W2807446327","https://openalex.org/W2808870153","https://openalex.org/W2896549791","https://openalex.org/W2898257314","https://openalex.org/W2912733343","https://openalex.org/W2922253179","https://openalex.org/W2928728759","https://openalex.org/W2971477482","https://openalex.org/W2979414185","https://openalex.org/W2979685247","https://openalex.org/W2979874034","https://openalex.org/W2980135163","https://openalex.org/W2985198565","https://openalex.org/W3011204562","https://openalex.org/W3011562006","https://openalex.org/W3011679035","https://openalex.org/W3012104451","https://openalex.org/W3017517361","https://openalex.org/W3036019667","https://openalex.org/W3089850879","https://openalex.org/W3159603107","https://openalex.org/W3164246580","https://openalex.org/W3165215466","https://openalex.org/W4235704917","https://openalex.org/W4251371631"],"related_works":["https://openalex.org/W2185469136","https://openalex.org/W3125011624","https://openalex.org/W1508631387","https://openalex.org/W2370917603","https://openalex.org/W2952760143","https://openalex.org/W4306353150","https://openalex.org/W2017776670","https://openalex.org/W2347897961","https://openalex.org/W2979236518","https://openalex.org/W2358318464"],"abstract_inverted_index":{"OBJECTIVE:":[0],"A":[1,173],"common":[2],"phase":[3],"of":[4,12,17,34,44,80,87,103,140,176,186,196,213,232,240],"early-stage":[5],"oncological":[6],"treatment":[7],"is":[8,29,203],"the":[9,21,32,53,77,85,88,124,136,194,209,230,238],"surgical":[10,219],"resection":[11,22,79],"cancerous":[13,167],"tissue.":[14],"The":[15],"presence":[16],"cancer":[18,35],"cells":[19],"on":[20,98],"margin,":[23,28],"referred":[24],"to":[25,56,218,223],"as":[26,68],"positive":[27],"correlated":[30],"with":[31,76],"recurrence":[33],"and":[36,100,116,138,144,157,193,227],"may":[37],"require":[38],"re-operation,":[39],"negatively":[40],"impacting":[41],"many":[42],"facets":[43],"patient":[45],"outcomes.":[46],"There":[47],"exists":[48],"a":[49],"significant":[50],"gap":[51],"in":[52,129,165,229],"surgeon's":[54],"ability":[55],"intraoperatively":[57,118],"delineate":[58],"between":[59],"tissues.":[60],"Mass":[61],"spectrometry":[62,114,142,215],"methods":[63,127],"have":[64],"shown":[65],"considerable":[66],"promise":[67],"intraoperative":[69,200,241],"tissue":[70,146],"profiling":[71],"tools":[72],"that":[73,161],"can":[74],"assist":[75],"complete":[78],"cancer.":[81],"To":[82],"do":[83],"so,":[84],"vastness":[86],"information":[89],"collected":[90],"through":[91,105],"these":[92,130],"modalities":[93],"must":[94],"be":[95],"digested,":[96],"relying":[97],"robust":[99,197],"efficient":[101],"extraction":[102],"insights":[104],"data":[106,125,187,234],"analysis":[107,126,198,235],"pipelines.":[108],"METHODS:":[109],"We":[110,121],"review":[111,134],"clinical":[112],"mass":[113,141,191,214],"literature":[115],"prioritize":[117],"applied":[119,217],"modalities.":[120],"also":[122],"survey":[123],"employed":[128],"studies.":[131],"RESULTS:":[132],"Our":[133],"outlines":[135],"advantages":[137],"shortcomings":[139],"imaging":[143],"point-based":[145],"probing":[147],"methods.":[148],"For":[149],"each":[150],"modality,":[151],"we":[152,221],"identify":[153],"statistical,":[154],"linear":[155],"transformation":[156],"machine":[158],"learning":[159],"techniques":[160,216],"demonstrate":[162],"high":[163],"performance":[164],"classifying":[166],"tissues":[168],"across":[169],"several":[170],"organ":[171],"systems.":[172],"limited":[174],"number":[175],"studies":[177],"presented":[178],"results":[179],"captured":[180],"intraoperatively.":[181],"CONCLUSION:":[182],"Through":[183],"continued":[184],"research":[185],"centric":[188],"techniques,":[189],"like":[190],"spectrometry,":[192],"development":[195,239],"approaches,":[199],"margin":[201,242],"assessment":[202],"becoming":[204],"feasible.":[205],"SIGNIFICANCE:":[206],"By":[207],"establishing":[208],"relatively":[210],"short":[211],"history":[212],"studies,":[220],"hope":[222],"inform":[224],"future":[225],"applications":[226],"aid":[228],"selection":[231],"suitable":[233],"frameworks":[236],"for":[237],"detection":[243],"technologies.":[244]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4}],"updated_date":"2026-07-01T08:55:40.977307","created_date":"2025-10-10T00:00:00"}
