{"id":"https://openalex.org/W2165003826","doi":"https://doi.org/10.1109/tbme.2011.2182051","title":"Fully Automated Colon Segmentation for the Computation of Complete Colon Centerline in Virtual Colonoscopy","display_name":"Fully Automated Colon Segmentation for the Computation of Complete Colon Centerline in Virtual Colonoscopy","publication_year":2011,"publication_date":"2011-12-29","ids":{"openalex":"https://openalex.org/W2165003826","doi":"https://doi.org/10.1109/tbme.2011.2182051","mag":"2165003826","pmid":"https://pubmed.ncbi.nlm.nih.gov/22207637"},"language":"en","primary_location":{"id":"doi:10.1109/tbme.2011.2182051","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tbme.2011.2182051","pdf_url":null,"source":{"id":"https://openalex.org/S5240358","display_name":"IEEE Transactions on Biomedical Engineering","issn_l":"0018-9294","issn":["0018-9294","1558-2531"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Biomedical Engineering","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100737498","display_name":"Lin L\u00fc","orcid":"https://orcid.org/0000-0001-7743-7022"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lin Lu","raw_affiliation_strings":["Department of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China. linlu@sjtu.edu.cn","Department of Biomedical Engineering, Shanghai Jiaotong University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China. linlu@sjtu.edu.cn","institution_ids":["https://openalex.org/I183067930"]},{"raw_affiliation_string":"Department of Biomedical Engineering, Shanghai Jiaotong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115588309","display_name":"Danfeng Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Danfeng Zhang","raw_affiliation_strings":["Department of Biomedical Engineering, Shanghai Jiaotong University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Shanghai Jiaotong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100696013","display_name":"Lei Li","orcid":"https://orcid.org/0000-0001-9887-0175"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lei Li","raw_affiliation_strings":["Department of Biomedical Engineering, Shanghai Jiaotong University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Shanghai Jiaotong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058685565","display_name":"Jun Zhao","orcid":"https://orcid.org/0000-0002-3539-2249"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jun Zhao","raw_affiliation_strings":["Department of Biomedical Engineering, Shanghai Jiaotong University, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Shanghai Jiaotong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100737498"],"corresponding_institution_ids":["https://openalex.org/I183067930"],"apc_list":null,"apc_paid":null,"fwci":0.6929,"has_fulltext":false,"cited_by_count":19,"citation_normalized_percentile":{"value":0.72218576,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"59","issue":"4","first_page":"996","last_page":"1004"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10552","display_name":"Colorectal Cancer Screening and Detection","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10552","display_name":"Colorectal Cancer Screening and Detection","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.9890999794006348,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7567359209060669},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.64970862865448},{"id":"https://openalex.org/keywords/virtual-colonoscopy","display_name":"Virtual colonoscopy","score":0.5627453923225403},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.5538255572319031},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.546492338180542},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.4690335988998413},{"id":"https://openalex.org/keywords/distal-colon","display_name":"Distal colon","score":0.41429126262664795},{"id":"https://openalex.org/keywords/colonoscopy","display_name":"Colonoscopy","score":0.4020993113517761},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.33333516120910645},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3306216597557068},{"id":"https://openalex.org/keywords/colorectal-cancer","display_name":"Colorectal cancer","score":0.15109410881996155},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.10182365775108337},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.06787875294685364}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7567359209060669},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.64970862865448},{"id":"https://openalex.org/C2776759754","wikidata":"https://www.wikidata.org/wiki/Q302481","display_name":"Virtual colonoscopy","level":5,"score":0.5627453923225403},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.5538255572319031},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.546492338180542},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.4690335988998413},{"id":"https://openalex.org/C3020179232","wikidata":"https://www.wikidata.org/wiki/Q11083","display_name":"Distal colon","level":2,"score":0.41429126262664795},{"id":"https://openalex.org/C2778435480","wikidata":"https://www.wikidata.org/wiki/Q840387","display_name":"Colonoscopy","level":4,"score":0.4020993113517761},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.33333516120910645},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3306216597557068},{"id":"https://openalex.org/C526805850","wikidata":"https://www.wikidata.org/wiki/Q188874","display_name":"Colorectal cancer","level":3,"score":0.15109410881996155},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.10182365775108337},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.06787875294685364},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003106","descriptor_name":"Colon","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D003106","descriptor_name":"Colon","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D003106","descriptor_name":"Colon","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D003111","descriptor_name":"Colonic Polyps","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D003111","descriptor_name":"Colonic Polyps","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D003111","descriptor_name":"Colonic Polyps","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011856","descriptor_name":"Radiographic Image Enhancement","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011856","descriptor_name":"Radiographic Image Enhancement","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011856","descriptor_name":"Radiographic Image Enhancement","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011857","descriptor_name":"Radiographic Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011857","descriptor_name":"Radiographic Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D011857","descriptor_name":"Radiographic Image Interpretation, Computer-Assisted","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012680","descriptor_name":"Sensitivity and Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023881","descriptor_name":"Colonography, Computed Tomographic","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023881","descriptor_name":"Colonography, Computed Tomographic","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023881","descriptor_name":"Colonography, Computed Tomographic","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":2,"locations":[{"id":"doi:10.1109/tbme.2011.2182051","is_oa":false,"landing_page_url":"https://doi.org/10.1109/tbme.2011.2182051","pdf_url":null,"source":{"id":"https://openalex.org/S5240358","display_name":"IEEE Transactions on Biomedical Engineering","issn_l":"0018-9294","issn":["0018-9294","1558-2531"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Biomedical Engineering","raw_type":"journal-article"},{"id":"pmid:22207637","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22207637","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE transactions on bio-medical engineering","raw_type":null}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":21,"referenced_works":["https://openalex.org/W207529665","https://openalex.org/W1606837215","https://openalex.org/W1973255931","https://openalex.org/W1978586210","https://openalex.org/W1980317269","https://openalex.org/W2000280323","https://openalex.org/W2032822958","https://openalex.org/W2065030495","https://openalex.org/W2067051042","https://openalex.org/W2073930176","https://openalex.org/W2081907510","https://openalex.org/W2104795754","https://openalex.org/W2108703859","https://openalex.org/W2123091789","https://openalex.org/W2125780823","https://openalex.org/W2128988020","https://openalex.org/W2155345223","https://openalex.org/W2162848770","https://openalex.org/W2169528473","https://openalex.org/W2323727688","https://openalex.org/W4250208678"],"related_works":["https://openalex.org/W2411110609","https://openalex.org/W1581074810","https://openalex.org/W4388060164","https://openalex.org/W2378745627","https://openalex.org/W1992491222","https://openalex.org/W207055849","https://openalex.org/W2404954532","https://openalex.org/W2046938172","https://openalex.org/W914189219","https://openalex.org/W2432105681"],"abstract_inverted_index":{"Virtual":[0],"colonoscopy":[1],"detects":[2],"polyps":[3],"by":[4,130],"navigating":[5],"along":[6],"a":[7,20,63,137],"colon":[8,11,27,39,60,94,157,191],"centerline.":[9,28],"Complete":[10],"segmentation":[12,95,158],"based":[13],"on":[14,77],"computed":[15],"tomography":[16],"(CT)":[17],"data":[18],"is":[19,97],"prerequisite":[21],"to":[22,87,102,144],"the":[23,41,51,58,88,104,109,145,151,184,194],"computation":[24],"of":[25,38,43,65,69,167],"complete":[26,35,190],"There":[29],"are":[30],"two":[31,105,155,169],"main":[32],"problems":[33],"impeding":[34],"segmentation:":[36],"overdistention/underdistention":[37],"and":[40,84,118,162,173],"use":[42],"oral":[44,70],"contrast":[45,71],"agents.":[46],"Overdistention":[47],"produces":[48],"loops":[49],"in":[50,99,112],"segmented":[52,59,89],"colon,":[53],"while":[54],"underdistention":[55],"may":[56,79],"cause":[57],"collapse":[61],"into":[62],"series":[64],"disconnected":[66],"segments.":[67],"Use":[68],"agents,":[72],"which":[73],"have":[74],"high":[75],"attenuation":[76],"CT,":[78],"add":[80],"redundant":[81],"structures":[82],"(bones":[83],"small":[85],"bowels)":[86],"colon.":[90],"A":[91],"fully":[92],"automated":[93],"method":[96,111,135,153,161,186],"proposed":[98,110,134,152,185],"this":[100],"paper":[101],"address":[103],"problems.":[106],"We":[107,148],"tested":[108],"170":[113],"cases,":[114],"including":[115],"37":[116],"\"moderate\"":[117],"133":[119],"\"challenging\"":[120],"cases.":[121],"Computer-generated":[122],"centerlines":[123,128,192],"were":[124,171],"compared":[125,150],"with":[126,142,154],"human-generated":[127,146],"(plotted":[129],"three":[131],"radiologists).":[132],"The":[133,165],"achieved":[136],"90.56%":[138],"correct":[139,175],"coverage":[140,176],"rate":[141],"respect":[143],"centerlines.":[147],"also":[149],"existing":[156,195],"methods:":[159],"Uitert's":[160],"Nappi's":[163],"method.":[164],"results":[166,181],"these":[168],"methods":[170],"75.16%":[172],"72.59%":[174],"rates,":[177],"respectively.":[178],"Our":[179],"experimental":[180],"indicate":[182],"that":[183],"could":[187],"yield":[188],"more":[189],"than":[193],"methods.":[196]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":1}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
