{"id":"https://openalex.org/W4285110273","doi":"https://doi.org/10.1109/tai.2022.3187060","title":"Identification of DNA N4-methylcytosine Sites via Multiview Kernel Sparse Representation Model","display_name":"Identification of DNA N4-methylcytosine Sites via Multiview Kernel Sparse Representation Model","publication_year":2022,"publication_date":"2022-06-28","ids":{"openalex":"https://openalex.org/W4285110273","doi":"https://doi.org/10.1109/tai.2022.3187060"},"language":"en","primary_location":{"id":"doi:10.1109/tai.2022.3187060","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tai.2022.3187060","pdf_url":"https://ieeexplore.ieee.org/ielx7/9078688/9184921/09809784.pdf","source":{"id":"https://openalex.org/S4210169448","display_name":"IEEE Transactions on Artificial Intelligence","issn_l":"2691-4581","issn":["2691-4581"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Artificial Intelligence","raw_type":"journal-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://ieeexplore.ieee.org/ielx7/9078688/9184921/09809784.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018156666","display_name":"Chengwei Ai","orcid":"https://orcid.org/0000-0003-1314-660X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Chengwei Ai","raw_affiliation_strings":["School of Computer Science and Technology, College of Intelligence and Computing, Tianjin University, Tianjin, China"],"raw_orcid":"https://orcid.org/0000-0003-1314-660X","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, College of Intelligence and Computing, Tianjin University, Tianjin, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082046789","display_name":"Prayag Tiwari","orcid":"https://orcid.org/0000-0002-2851-4260"},"institutions":[{"id":"https://openalex.org/I9927081","display_name":"Aalto University","ror":"https://ror.org/020hwjq30","country_code":"FI","type":"education","lineage":["https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Prayag Tiwari","raw_affiliation_strings":["Department of Computer Science, Aalto University, Espoo, Finland"],"raw_orcid":"https://orcid.org/0000-0002-2851-4260","affiliations":[{"raw_affiliation_string":"Department of Computer Science, Aalto University, Espoo, Finland","institution_ids":["https://openalex.org/I9927081"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081832999","display_name":"Hongpeng Yang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hongpeng Yang","raw_affiliation_strings":["School of Computer Science and Technology, College of Intelligence and Computing, Tianjin University, Tianjin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, College of Intelligence and Computing, Tianjin University, Tianjin, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100688233","display_name":"Yijie Ding","orcid":"https://orcid.org/0000-0003-2911-7643"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]},{"id":"https://openalex.org/I4210123686","display_name":"Quzhou University","ror":"https://ror.org/024nfx323","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210123686"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yijie Ding","raw_affiliation_strings":["Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, Quzhou, China"],"raw_orcid":"https://orcid.org/0000-0003-2911-7643","affiliations":[{"raw_affiliation_string":"Yangtze Delta Region Institute (Quzhou), University of Electronic Science and Technology of China, Quzhou, China","institution_ids":["https://openalex.org/I150229711","https://openalex.org/I4210123686"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001619694","display_name":"Jijun Tang","orcid":"https://orcid.org/0000-0002-6377-536X"},"institutions":[{"id":"https://openalex.org/I155781252","display_name":"University of South Carolina","ror":"https://ror.org/02b6qw903","country_code":"US","type":"education","lineage":["https://openalex.org/I155781252"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jijun Tang","raw_affiliation_strings":["Department of Computational Science and Engineering, University of South Carolina, CO, USA","Department of Computational Science and Engineering, University of South Carolina, Columbia, USA"],"raw_orcid":"https://orcid.org/0000-0002-6377-536X","affiliations":[{"raw_affiliation_string":"Department of Computational Science and Engineering, University of South Carolina, CO, USA","institution_ids":["https://openalex.org/I155781252"]},{"raw_affiliation_string":"Department of Computational Science and Engineering, University of South Carolina, Columbia, USA","institution_ids":["https://openalex.org/I155781252"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100702161","display_name":"Fei Guo","orcid":"https://orcid.org/0000-0001-8346-0798"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fei Guo","raw_affiliation_strings":["School of Computer Science and Engineering, Central South University, Changsha, China"],"raw_orcid":"https://orcid.org/0000-0001-8346-0798","affiliations":[{"raw_affiliation_string":"School of Computer Science and Engineering, Central South University, Changsha, China","institution_ids":["https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.7843,"has_fulltext":false,"cited_by_count":10,"citation_normalized_percentile":{"value":0.67949282,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"4","issue":"5","first_page":"1236","last_page":"1245"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9817000031471252,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6062225699424744},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6021934151649475},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5337746143341064},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.5146740078926086},{"id":"https://openalex.org/keywords/kernel-method","display_name":"Kernel method","score":0.49517694115638733},{"id":"https://openalex.org/keywords/kernel","display_name":"Kernel (algebra)","score":0.48089054226875305},{"id":"https://openalex.org/keywords/sparse-approximation","display_name":"Sparse approximation","score":0.4650017023086548},{"id":"https://openalex.org/keywords/regularization","display_name":"Regularization (linguistics)","score":0.46078598499298096},{"id":"https://openalex.org/keywords/feature-extraction","display_name":"Feature extraction","score":0.45537716150283813},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3532482385635376},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.2606448531150818},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.22438138723373413}],"concepts":[{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6062225699424744},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6021934151649475},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5337746143341064},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.5146740078926086},{"id":"https://openalex.org/C122280245","wikidata":"https://www.wikidata.org/wiki/Q620622","display_name":"Kernel method","level":3,"score":0.49517694115638733},{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.48089054226875305},{"id":"https://openalex.org/C124066611","wikidata":"https://www.wikidata.org/wiki/Q28684319","display_name":"Sparse approximation","level":2,"score":0.4650017023086548},{"id":"https://openalex.org/C2776135515","wikidata":"https://www.wikidata.org/wiki/Q17143721","display_name":"Regularization (linguistics)","level":2,"score":0.46078598499298096},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.45537716150283813},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3532482385635376},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.2606448531150818},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.22438138723373413},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[],"locations_count":2,"locations":[{"id":"doi:10.1109/tai.2022.3187060","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tai.2022.3187060","pdf_url":"https://ieeexplore.ieee.org/ielx7/9078688/9184921/09809784.pdf","source":{"id":"https://openalex.org/S4210169448","display_name":"IEEE Transactions on Artificial Intelligence","issn_l":"2691-4581","issn":["2691-4581"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Artificial Intelligence","raw_type":"journal-article"},{"id":"pmh:oai:aaltodoc.aalto.fi:123456789/115825","is_oa":true,"landing_page_url":"https://aaltodoc.aalto.fi/handle/123456789/115825","pdf_url":null,"source":{"id":"https://openalex.org/S4306401662","display_name":"Aaltodoc (Aalto University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I9927081","host_organization_name":"Aalto University","host_organization_lineage":["https://openalex.org/I9927081"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1109/tai.2022.3187060","is_oa":true,"landing_page_url":"https://doi.org/10.1109/tai.2022.3187060","pdf_url":"https://ieeexplore.ieee.org/ielx7/9078688/9184921/09809784.pdf","source":{"id":"https://openalex.org/S4210169448","display_name":"IEEE Transactions on Artificial Intelligence","issn_l":"2691-4581","issn":["2691-4581"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319808","host_organization_name":"Institute of Electrical and Electronics Engineers","host_organization_lineage":["https://openalex.org/P4310319808"],"host_organization_lineage_names":["Institute of Electrical and Electronics Engineers"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"IEEE Transactions on Artificial Intelligence","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","score":0.7200000286102295,"id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G132223108","display_name":"Yksil\u00f6llistetty Terveys \u2014 Aalto-korkeakoulus\u00e4\u00e4ti\u00f6 sr (884/31/2018)","funder_award_id":"884/31/2018","funder_id":"https://openalex.org/F4320328501","funder_display_name":"Business Finland"},{"id":"https://openalex.org/G18056018","display_name":"\u764c\u7ec6\u80de\u57fa\u56e0\u7ec4\u7ed3\u6784\u53d8\u5f02\u53ca\u8fdb\u5316\u7684\u7b97\u6cd5\u7814\u7a76","funder_award_id":"61972280","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2147514142","display_name":null,"funder_award_id":"62172296","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2630756688","display_name":null,"funder_award_id":"61902271","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2800482734","display_name":"Data Literacy for Responsible Decision-Making","funder_award_id":"336033","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G5527349350","display_name":null,"funder_award_id":"315896","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G6716713773","display_name":null,"funder_award_id":"19KJB520014","funder_id":"https://openalex.org/F4320335440","funder_display_name":"Natural Science Research of Jiangsu Higher Education Institutions of China"},{"id":"https://openalex.org/G7037578608","display_name":null,"funder_award_id":"62172076","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"},{"id":"https://openalex.org/F4320328501","display_name":"Business Finland","ror":"https://ror.org/05bgf9v38"},{"id":"https://openalex.org/F4320335440","display_name":"Natural Science Research of Jiangsu Higher Education Institutions of China","ror":null}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":56,"referenced_works":["https://openalex.org/W7721663","https://openalex.org/W331119053","https://openalex.org/W1468573672","https://openalex.org/W1566303667","https://openalex.org/W1638081485","https://openalex.org/W1907775068","https://openalex.org/W1964749215","https://openalex.org/W1984783889","https://openalex.org/W1991244466","https://openalex.org/W2077838441","https://openalex.org/W2085492504","https://openalex.org/W2104300208","https://openalex.org/W2120552947","https://openalex.org/W2129812935","https://openalex.org/W2142848040","https://openalex.org/W2170747616","https://openalex.org/W2290946060","https://openalex.org/W2470414691","https://openalex.org/W2537227711","https://openalex.org/W2590019597","https://openalex.org/W2590653482","https://openalex.org/W2605446432","https://openalex.org/W2737592062","https://openalex.org/W2806146459","https://openalex.org/W2883534252","https://openalex.org/W2891420113","https://openalex.org/W2921772208","https://openalex.org/W2942801317","https://openalex.org/W2976262693","https://openalex.org/W2990867745","https://openalex.org/W2993513714","https://openalex.org/W3000675402","https://openalex.org/W3007033512","https://openalex.org/W3011537067","https://openalex.org/W3015957975","https://openalex.org/W3021654843","https://openalex.org/W3034527519","https://openalex.org/W3084754935","https://openalex.org/W3091213234","https://openalex.org/W3094384122","https://openalex.org/W3096599651","https://openalex.org/W3125157949","https://openalex.org/W3154745533","https://openalex.org/W3157999218","https://openalex.org/W3160967194","https://openalex.org/W3161094615","https://openalex.org/W3176694003","https://openalex.org/W3184374600","https://openalex.org/W3193449393","https://openalex.org/W3199896713","https://openalex.org/W3210257016","https://openalex.org/W4205339613","https://openalex.org/W4206974046","https://openalex.org/W6600307240","https://openalex.org/W6633943827","https://openalex.org/W6775070481"],"related_works":["https://openalex.org/W2089892314","https://openalex.org/W1603091392","https://openalex.org/W4386075310","https://openalex.org/W2095626363","https://openalex.org/W2169565408","https://openalex.org/W2127229869","https://openalex.org/W3123056048","https://openalex.org/W2129978300","https://openalex.org/W2150638158","https://openalex.org/W2121506664"],"abstract_inverted_index":{"Identifying":[0],"DNA":[1,16,108,191],"N4-methylcytosine":[2],"(4mC)":[3],"sites":[4,32],"is":[5,33,146,171],"of":[6,76,97,189],"great":[7],"significance":[8],"in":[9,159],"biological":[10],"research,":[11],"such":[12],"as":[13,152],"chromatin":[14],"structure,":[15],"stability,":[17],"DNA-protein":[18],"interaction":[19],"and":[20,162,181,204],"controlling":[21],"gene":[22],"expression.":[23],"However,":[24],"the":[25,62,68,107,125,143],"traditional":[26],"sequencing":[27],"technology":[28],"to":[29,38,105,123,153,173],"identify":[30,186],"4mC":[31,40,192],"very":[34],"time-consuming.":[35],"In":[36,79,121,142],"order":[37,122],"detect":[39],"sites,":[41,193],"we":[42,58,82,94,130],"develop":[43],"a":[44,84,113,132,187],"multi-view":[45,63,85,133],"learning":[46,64],"method":[47,65],"for":[48],"achieving":[49],"more":[50],"effectively":[51],"via":[52],"merging":[53],"multiple":[54,77,202],"feature":[55,99],"spaces.":[56],"Furthermore,":[57],"think":[59],"about":[60],"whether":[61],"can":[66,185],"improve":[67],"across":[69],"species":[70,161,180,203],"classification":[71],"ability":[72],"by":[73,137],"fusing":[74],"data":[75],"species.":[78],"our":[80],"study,":[81],"propose":[83],"Laplacian":[86],"kernel":[87,114],"sparse":[88,115],"representation-based":[89,116],"classifier,":[90],"called":[91],"MvLapKSRC-HSIC.":[92],"First,":[93],"make":[95],"use":[96],"three":[98],"extraction":[100],"methods":[101,158,176],"(PSTNP,":[102],"NCP,":[103],"DPP)":[104],"extract":[106],"sequence":[109],"features.":[110],"MvLapKSRC-HSIC":[111,145,170,184],"uses":[112],"classifier":[117],"with":[118,155],"graph":[119],"regularization.":[120],"maintain":[124],"independence":[126,139],"between":[127],"various":[128],"views,":[129],"add":[131],"regularization":[134],"term":[135],"constructed":[136],"Hilbert-Schmidt":[138],"criterion":[140],"(HSIC).":[141],"experiments,":[144],"applied":[147],"on":[148,177,201],"six":[149],"datasets,":[150],"so":[151],"compare":[154],"other":[156,174],"popular":[157],"single":[160,179],"cross-species":[163],"experiments.":[164],"All":[165],"experimental":[166],"results":[167],"show":[168],"that":[169],"superior":[172],"outstanding":[175],"both":[178],"cross-species.":[182],"Importantly,":[183],"series":[188],"potential":[190],"which":[194],"have":[195],"not":[196],"yet":[197],"been":[198],"experimentally":[199],"evaluate":[200],"merit":[205],"further":[206],"research.":[207]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":7}],"updated_date":"2026-08-01T09:00:35.917206","created_date":"2025-10-10T00:00:00"}
