{"id":"https://openalex.org/W4399729498","doi":"https://doi.org/10.1109/syscon61195.2024.10553564","title":"Modularization and Systems Engineering in Synthetic Biology: A Formal Architecture Modeling Approach using SysML","display_name":"Modularization and Systems Engineering in Synthetic Biology: A Formal Architecture Modeling Approach using SysML","publication_year":2024,"publication_date":"2024-04-15","ids":{"openalex":"https://openalex.org/W4399729498","doi":"https://doi.org/10.1109/syscon61195.2024.10553564"},"language":"en","primary_location":{"id":"doi:10.1109/syscon61195.2024.10553564","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/syscon61195.2024.10553564","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Systems Conference (SysCon)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111231344","display_name":"Ben Hancock","orcid":null},"institutions":[{"id":"https://openalex.org/I44896327","display_name":"Mitre (United States)","ror":"https://ror.org/03ks2a131","country_code":"US","type":"company","lineage":["https://openalex.org/I44896327"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ben Hancock","raw_affiliation_strings":["The MITRE Corporation,Bedford,MA,01730"],"affiliations":[{"raw_affiliation_string":"The MITRE Corporation,Bedford,MA,01730","institution_ids":["https://openalex.org/I44896327"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112073819","display_name":"A. Tobias","orcid":"https://orcid.org/0000-0002-5866-5254"},"institutions":[{"id":"https://openalex.org/I44896327","display_name":"Mitre (United States)","ror":"https://ror.org/03ks2a131","country_code":"US","type":"company","lineage":["https://openalex.org/I44896327"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander V. Tobias","raw_affiliation_strings":["The MITRE Corporation,Bedford,MA,01730"],"affiliations":[{"raw_affiliation_string":"The MITRE Corporation,Bedford,MA,01730","institution_ids":["https://openalex.org/I44896327"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113254580","display_name":"Jonathan K. Leung","orcid":null},"institutions":[{"id":"https://openalex.org/I44896327","display_name":"Mitre (United States)","ror":"https://ror.org/03ks2a131","country_code":"US","type":"company","lineage":["https://openalex.org/I44896327"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jonathan K. Leung","raw_affiliation_strings":["The MITRE Corporation,Bedford,MA,01730"],"affiliations":[{"raw_affiliation_string":"The MITRE Corporation,Bedford,MA,01730","institution_ids":["https://openalex.org/I44896327"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037603716","display_name":"Aleksandra Markina\u2010Khusid","orcid":"https://orcid.org/0000-0003-0652-2187"},"institutions":[{"id":"https://openalex.org/I44896327","display_name":"Mitre (United States)","ror":"https://ror.org/03ks2a131","country_code":"US","type":"company","lineage":["https://openalex.org/I44896327"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aleksandra Markina-Khusid","raw_affiliation_strings":["The MITRE Corporation,Bedford,MA,01730"],"affiliations":[{"raw_affiliation_string":"The MITRE Corporation,Bedford,MA,01730","institution_ids":["https://openalex.org/I44896327"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091471463","display_name":"Marc Salit","orcid":"https://orcid.org/0000-0003-1624-5195"},"institutions":[{"id":"https://openalex.org/I44896327","display_name":"Mitre (United States)","ror":"https://ror.org/03ks2a131","country_code":"US","type":"company","lineage":["https://openalex.org/I44896327"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marc Salit","raw_affiliation_strings":["The MITRE Corporation,Bedford,MA,01730"],"affiliations":[{"raw_affiliation_string":"The MITRE Corporation,Bedford,MA,01730","institution_ids":["https://openalex.org/I44896327"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5111231344"],"corresponding_institution_ids":["https://openalex.org/I44896327"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.08157949,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"3"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12000","display_name":"Systems Engineering Methodologies and Applications","score":0.9693999886512756,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12000","display_name":"Systems Engineering Methodologies and Applications","score":0.9693999886512756,"subfield":{"id":"https://openalex.org/subfields/2207","display_name":"Control and Systems Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11445","display_name":"Origins and Evolution of Life","score":0.9319999814033508,"subfield":{"id":"https://openalex.org/subfields/3103","display_name":"Astronomy and Astrophysics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9291999936103821,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/systems-modeling-language","display_name":"Systems Modeling Language","score":0.7568293213844299},{"id":"https://openalex.org/keywords/modular-programming","display_name":"Modular programming","score":0.724635899066925},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5941617488861084},{"id":"https://openalex.org/keywords/systems-engineering","display_name":"Systems engineering","score":0.5597923398017883},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.5491995811462402},{"id":"https://openalex.org/keywords/architecture","display_name":"Architecture","score":0.522317111492157},{"id":"https://openalex.org/keywords/unified-modeling-language","display_name":"Unified Modeling Language","score":0.4389364421367645},{"id":"https://openalex.org/keywords/computer-architecture","display_name":"Computer architecture","score":0.36552679538726807},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2900601625442505},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.2711738646030426},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.11993449926376343}],"concepts":[{"id":"https://openalex.org/C21285288","wikidata":"https://www.wikidata.org/wiki/Q2117885","display_name":"Systems Modeling Language","level":4,"score":0.7568293213844299},{"id":"https://openalex.org/C88482812","wikidata":"https://www.wikidata.org/wiki/Q6453666","display_name":"Modular programming","level":2,"score":0.724635899066925},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5941617488861084},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.5597923398017883},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.5491995811462402},{"id":"https://openalex.org/C123657996","wikidata":"https://www.wikidata.org/wiki/Q12271","display_name":"Architecture","level":2,"score":0.522317111492157},{"id":"https://openalex.org/C145644426","wikidata":"https://www.wikidata.org/wiki/Q169411","display_name":"Unified Modeling Language","level":3,"score":0.4389364421367645},{"id":"https://openalex.org/C118524514","wikidata":"https://www.wikidata.org/wiki/Q173212","display_name":"Computer architecture","level":1,"score":0.36552679538726807},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2900601625442505},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.2711738646030426},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.11993449926376343},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/syscon61195.2024.10553564","is_oa":false,"landing_page_url":"http://dx.doi.org/10.1109/syscon61195.2024.10553564","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 IEEE International Systems Conference (SysCon)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":5,"referenced_works":["https://openalex.org/W2484051095","https://openalex.org/W2769745691","https://openalex.org/W2789861717","https://openalex.org/W3217577583","https://openalex.org/W4387140966"],"related_works":["https://openalex.org/W2170113317","https://openalex.org/W2009258791","https://openalex.org/W2135253840","https://openalex.org/W1984712372","https://openalex.org/W2170871060","https://openalex.org/W3149751866","https://openalex.org/W2141291477","https://openalex.org/W4244804067","https://openalex.org/W2139959881","https://openalex.org/W2313716857"],"abstract_inverted_index":{"This":[0,90],"paper":[1,57],"explores":[2],"the":[3,40,96,111,147],"application":[4],"of":[5,85,98,113,118],"Systems":[6,66,79],"Modeling":[7],"Language":[8],"(SysML)":[9],"as":[10],"a":[11,65,119,123,132,150],"formal":[12],"architecture":[13],"modeling":[14],"technique":[15],"[1]":[16],"to":[17,44,76,131],"modularize":[18],"Synthetic":[19,35,53,87,99,140,155],"Biology":[20,36,54,88,141,156],"research":[21],"and":[22,31,49,69,73,110,126,136,144,153],"development":[23],"(R&D)":[24],"processes":[25],"across":[26],"different":[27],"organizations.":[28],"By":[29],"capturing":[30],"specifying":[32],"interfaces":[33],"between":[34],"subprocesses":[37],"or":[38],"\"operations,\"":[39],"proposed":[41],"approach":[42],"aims":[43],"enhance":[45],"collaboration,":[46],"accelerate":[47],"innovation,":[48],"increase":[50],"robustness":[51],"in":[52],"endeavors.":[55],"The":[56],"showcases":[58],"how":[59,78,104],"modularization":[60],"can":[61,81,107,129],"be":[62,108],"integrated":[63],"within":[64],"Engineering":[67,80],"framework":[68],"provides":[70],"sample":[71],"diagrams":[72],"data":[74],"structures":[75],"illustrate":[77],"promote":[82],"systems":[83],"integration":[84],"modular":[86],"processes.":[89],"work":[91],"has":[92],"significant":[93],"implications":[94],"for":[95,102,139,149],"field":[97],"Biology,":[100],"particularly":[101],"reshaping":[103],"R&D":[105,142],"projects":[106],"conducted":[109],"organization":[112],"its":[114],"nascent":[115],"industry.":[116,157],"Establishment":[117],"connected":[120],"ecosystem":[121],"with":[122],"purpose-built":[124],"vocabulary":[125],"exchange":[127],"language":[128],"lead":[130],"more":[133,151],"open,":[134],"competitive,":[135],"efficient":[137],"marketplace":[138],"services":[143],"goods,":[145],"paving":[146],"way":[148],"successful":[152],"profitable":[154]},"counts_by_year":[],"updated_date":"2025-12-26T23:08:49.675405","created_date":"2025-10-10T00:00:00"}
