{"id":"https://openalex.org/W2159838442","doi":"https://doi.org/10.1109/ssdm.2003.1214987","title":"MoBIoS: a metric-space DBMS to support biological discovery","display_name":"MoBIoS: a metric-space DBMS to support biological discovery","publication_year":2004,"publication_date":"2004-01-24","ids":{"openalex":"https://openalex.org/W2159838442","doi":"https://doi.org/10.1109/ssdm.2003.1214987","mag":"2159838442"},"language":"en","primary_location":{"id":"doi:10.1109/ssdm.2003.1214987","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ssdm.2003.1214987","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"15th International Conference on Scientific and Statistical Database Management, 2003.","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083499808","display_name":"Daniel P. Miranker","orcid":"https://orcid.org/0009-0003-8838-2890"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"D. Miranker","raw_affiliation_strings":["Department of Computer Sciences, Center of Computational Biology and Bioinformatics, University of Technology, Austin, TX, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Sciences, Center of Computational Biology and Bioinformatics, University of Technology, Austin, TX, USA","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101883722","display_name":"Weijia Xu","orcid":"https://orcid.org/0000-0002-5134-6381"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Weijia Xu","raw_affiliation_strings":["Department of Computer Sciences, Center of Computational Biology and Bioinformatics, University of Technology, Austin, TX, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Sciences, Center of Computational Biology and Bioinformatics, University of Technology, Austin, TX, USA","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101724957","display_name":"Rui Mao","orcid":"https://orcid.org/0000-0002-3645-5520"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rui Mao","raw_affiliation_strings":["Department of Computer Sciences, Center of Computational Biology and Bioinformatics, University of Technology, Austin, TX, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Sciences, Center of Computational Biology and Bioinformatics, University of Technology, Austin, TX, USA","institution_ids":["https://openalex.org/I86519309"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5083499808"],"corresponding_institution_ids":["https://openalex.org/I86519309"],"apc_list":null,"apc_paid":null,"fwci":2.5238,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.90076583,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"241","last_page":"244"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11106","display_name":"Data Management and Algorithms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11106","display_name":"Data Management and Algorithms","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1711","display_name":"Signal Processing"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10317","display_name":"Advanced Database Systems and Queries","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8327093124389648},{"id":"https://openalex.org/keywords/sql","display_name":"SQL","score":0.7200483083724976},{"id":"https://openalex.org/keywords/query-language","display_name":"Query language","score":0.5916232466697693},{"id":"https://openalex.org/keywords/relational-database","display_name":"Relational database","score":0.5528716444969177},{"id":"https://openalex.org/keywords/data-definition-language","display_name":"Data definition language","score":0.5333483219146729},{"id":"https://openalex.org/keywords/relational-database-management-system","display_name":"Relational database management system","score":0.5149295926094055},{"id":"https://openalex.org/keywords/view","display_name":"View","score":0.49100425839424133},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.4804351031780243},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.46722114086151123},{"id":"https://openalex.org/keywords/query-by-example","display_name":"Query by Example","score":0.46208426356315613},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.45491835474967957},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.42841508984565735},{"id":"https://openalex.org/keywords/database-design","display_name":"Database design","score":0.4197555184364319},{"id":"https://openalex.org/keywords/web-search-query","display_name":"Web search query","score":0.3110758066177368},{"id":"https://openalex.org/keywords/search-engine","display_name":"Search engine","score":0.11348435282707214}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8327093124389648},{"id":"https://openalex.org/C510870499","wikidata":"https://www.wikidata.org/wiki/Q47607","display_name":"SQL","level":2,"score":0.7200483083724976},{"id":"https://openalex.org/C192028432","wikidata":"https://www.wikidata.org/wiki/Q845739","display_name":"Query language","level":2,"score":0.5916232466697693},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.5528716444969177},{"id":"https://openalex.org/C55596503","wikidata":"https://www.wikidata.org/wiki/Q1431648","display_name":"Data definition language","level":3,"score":0.5333483219146729},{"id":"https://openalex.org/C24394798","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database management system","level":3,"score":0.5149295926094055},{"id":"https://openalex.org/C54239708","wikidata":"https://www.wikidata.org/wiki/Q1329910","display_name":"View","level":3,"score":0.49100425839424133},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.4804351031780243},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.46722114086151123},{"id":"https://openalex.org/C194222762","wikidata":"https://www.wikidata.org/wiki/Q114486","display_name":"Query by Example","level":4,"score":0.46208426356315613},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.45491835474967957},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.42841508984565735},{"id":"https://openalex.org/C148840519","wikidata":"https://www.wikidata.org/wiki/Q1049878","display_name":"Database design","level":2,"score":0.4197555184364319},{"id":"https://openalex.org/C164120249","wikidata":"https://www.wikidata.org/wiki/Q995982","display_name":"Web search query","level":3,"score":0.3110758066177368},{"id":"https://openalex.org/C97854310","wikidata":"https://www.wikidata.org/wiki/Q19541","display_name":"Search engine","level":2,"score":0.11348435282707214},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/ssdm.2003.1214987","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ssdm.2003.1214987","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"15th International Conference on Scientific and Statistical Database Management, 2003.","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W125925666","https://openalex.org/W1549891226","https://openalex.org/W1554174647","https://openalex.org/W1557583788","https://openalex.org/W1964443249","https://openalex.org/W1982968560","https://openalex.org/W2022368654","https://openalex.org/W2029981549","https://openalex.org/W2038044292","https://openalex.org/W2061959470","https://openalex.org/W2074231493","https://openalex.org/W2079746791","https://openalex.org/W2087064593","https://openalex.org/W2124222502","https://openalex.org/W2128786211","https://openalex.org/W2133312664","https://openalex.org/W2136145671","https://openalex.org/W2143642163","https://openalex.org/W2157092487","https://openalex.org/W2165156013","https://openalex.org/W2600349519","https://openalex.org/W2601913882","https://openalex.org/W2610179052","https://openalex.org/W2611880214","https://openalex.org/W6605063754","https://openalex.org/W6632963374","https://openalex.org/W6665634996","https://openalex.org/W6682969285"],"related_works":["https://openalex.org/W3196679839","https://openalex.org/W4378191824","https://openalex.org/W1992658322","https://openalex.org/W2920410935","https://openalex.org/W2406556412","https://openalex.org/W275517711","https://openalex.org/W2950623752","https://openalex.org/W2414769779","https://openalex.org/W2147856245","https://openalex.org/W3093740538"],"abstract_inverted_index":{"MoBIoS":[0,63,83],"is":[1,10],"a":[2,85],"specialized":[3],"database":[4,25],"management":[5,26],"system":[6],"whose":[7,16],"storage":[8],"manager":[9],"based":[11],"on":[12],"metricspace":[13],"indexing,":[14],"and":[15,41,79,95],"query":[17],"language":[18],"entails":[19],"biological":[20,32,71],"data":[21,35,57,72],"types.":[22],"When":[23],"relational":[24],"systems":[27],"are":[28,37,51],"used":[29],"to":[30,39,58,69],"support":[31],"data,":[33],"important":[34],"types":[36,73],"relegated":[38],"blob":[40],"unstructured":[42],"text":[43],"fields.":[44],"Thus,":[45],"even":[46],"simple,":[47],"but":[48],"critical":[49],"queries":[50],"executed":[52,96],"by":[53],"sequentially":[54],"dumping":[55],"the":[56,61],"utilities":[59],"outside":[60],"database.":[62],"provides":[64,84],"O(log":[65],"n)":[66],"physical":[67],"access":[68],"diverse":[70],"as":[74,76,97],"well":[75],"uniform":[77],"logical":[78],"syntactic":[80],"access.":[81],"Consequently,":[82],"framework":[86],"where":[87],"complex":[88],"bioinformatic":[89],"algorithms":[90],"may":[91],"be":[92],"effectively":[93],"expressed":[94],"concise":[98],"declarative":[99],"SQL-like":[100],"(Structured":[101],"Query":[102],"Language)":[103],"queries.":[104]},"counts_by_year":[{"year":2014,"cited_by_count":1}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
