{"id":"https://openalex.org/W2163980382","doi":"https://doi.org/10.1109/ssdm.2002.1029726","title":"The Edinburgh mouse atlas and gene-expression database: a spatio-temporal database for biological research","display_name":"The Edinburgh mouse atlas and gene-expression database: a spatio-temporal database for biological research","publication_year":2003,"publication_date":"2003-06-25","ids":{"openalex":"https://openalex.org/W2163980382","doi":"https://doi.org/10.1109/ssdm.2002.1029726","mag":"2163980382"},"language":"en","primary_location":{"id":"doi:10.1109/ssdm.2002.1029726","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ssdm.2002.1029726","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings 14th International Conference on Scientific and Statistical Database Management","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079735260","display_name":"Albert Burger","orcid":"https://orcid.org/0000-0002-5492-8635"},"institutions":[{"id":"https://openalex.org/I32062511","display_name":"Heriot-Watt University","ror":"https://ror.org/04mghma93","country_code":"GB","type":"education","lineage":["https://openalex.org/I32062511"]},{"id":"https://openalex.org/I90344618","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517","country_code":"GB","type":"government","lineage":["https://openalex.org/I4210087105","https://openalex.org/I90344618"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"A. Burger","raw_affiliation_strings":["Department of Computing and Elec. Engineering, Heriot-Watt University, Edinburgh, UK","Human Genetics Unit, Medical Research Council, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing and Elec. Engineering, Heriot-Watt University, Edinburgh, UK","institution_ids":["https://openalex.org/I32062511"]},{"raw_affiliation_string":"Human Genetics Unit, Medical Research Council, Edinburgh, UK","institution_ids":["https://openalex.org/I90344618"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057893272","display_name":"Richard Baldock","orcid":"https://orcid.org/0000-0003-0332-6877"},"institutions":[{"id":"https://openalex.org/I90344618","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517","country_code":"GB","type":"government","lineage":["https://openalex.org/I4210087105","https://openalex.org/I90344618"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"R. Baldock","raw_affiliation_strings":["Human Genetics Unit, Medical Research Council, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Human Genetics Unit, Medical Research Council, Edinburgh, UK","institution_ids":["https://openalex.org/I90344618"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113535543","display_name":"Yiya Yang","orcid":"https://orcid.org/0000-0001-6817-075X"},"institutions":[{"id":"https://openalex.org/I90344618","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517","country_code":"GB","type":"government","lineage":["https://openalex.org/I4210087105","https://openalex.org/I90344618"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Yiya Yang","raw_affiliation_strings":["Human Genetics Unit, Medical Research Council, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Human Genetics Unit, Medical Research Council, Edinburgh, UK","institution_ids":["https://openalex.org/I90344618"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011115835","display_name":"Anna Waterhouse","orcid":"https://orcid.org/0000-0003-4969-6099"},"institutions":[{"id":"https://openalex.org/I90344618","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517","country_code":"GB","type":"government","lineage":["https://openalex.org/I4210087105","https://openalex.org/I90344618"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"A. Waterhouse","raw_affiliation_strings":["Human Genetics Unit, Medical Research Council, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Human Genetics Unit, Medical Research Council, Edinburgh, UK","institution_ids":["https://openalex.org/I90344618"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021849832","display_name":"Derek Houghton","orcid":null},"institutions":[{"id":"https://openalex.org/I90344618","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517","country_code":"GB","type":"government","lineage":["https://openalex.org/I4210087105","https://openalex.org/I90344618"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"D. Houghton","raw_affiliation_strings":["Human Genetics Unit, Medical Research Council, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Human Genetics Unit, Medical Research Council, Edinburgh, UK","institution_ids":["https://openalex.org/I90344618"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079049557","display_name":"Nick Burton","orcid":"https://orcid.org/0000-0002-5495-3988"},"institutions":[{"id":"https://openalex.org/I90344618","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517","country_code":"GB","type":"government","lineage":["https://openalex.org/I4210087105","https://openalex.org/I90344618"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"N. Burton","raw_affiliation_strings":["Human Genetics Unit, Medical Research Council, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Human Genetics Unit, Medical Research Council, Edinburgh, UK","institution_ids":["https://openalex.org/I90344618"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110600428","display_name":"Duncan Davidson","orcid":null},"institutions":[{"id":"https://openalex.org/I90344618","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517","country_code":"GB","type":"government","lineage":["https://openalex.org/I4210087105","https://openalex.org/I90344618"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"D. Davidson","raw_affiliation_strings":["Human Genetics Unit, Medical Research Council, Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Human Genetics Unit, Medical Research Council, Edinburgh, UK","institution_ids":["https://openalex.org/I90344618"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":null,"apc_paid":null,"fwci":0.2291,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.54664152,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"41","issue":null,"first_page":"239","last_page":"239"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9598000049591064,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9598000049591064,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.6862400770187378},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6285409927368164},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6131734251976013},{"id":"https://openalex.org/keywords/human-protein-atlas","display_name":"Human Protein Atlas","score":0.46919676661491394},{"id":"https://openalex.org/keywords/java","display_name":"Java","score":0.4545445144176483},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.41196587681770325},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3388853669166565},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3243238031864166},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2741530239582062},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.26597094535827637},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2127315104007721},{"id":"https://openalex.org/keywords/protein-expression","display_name":"Protein expression","score":0.1052933931350708},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.09229066967964172}],"concepts":[{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.6862400770187378},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6285409927368164},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6131734251976013},{"id":"https://openalex.org/C158163496","wikidata":"https://www.wikidata.org/wiki/Q5937310","display_name":"Human Protein Atlas","level":4,"score":0.46919676661491394},{"id":"https://openalex.org/C548217200","wikidata":"https://www.wikidata.org/wiki/Q251","display_name":"Java","level":2,"score":0.4545445144176483},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.41196587681770325},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3388853669166565},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3243238031864166},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2741530239582062},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.26597094535827637},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2127315104007721},{"id":"https://openalex.org/C6856738","wikidata":"https://www.wikidata.org/wiki/Q331672","display_name":"Protein expression","level":3,"score":0.1052933931350708},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.09229066967964172},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/ssdm.2002.1029726","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ssdm.2002.1029726","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Proceedings 14th International Conference on Scientific and Statistical Database Management","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.46000000834465027,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":4,"referenced_works":["https://openalex.org/W636264593","https://openalex.org/W2292720634","https://openalex.org/W4240605225","https://openalex.org/W6697038763"],"related_works":["https://openalex.org/W2093262417","https://openalex.org/W2123131699","https://openalex.org/W650116260","https://openalex.org/W2378329187","https://openalex.org/W4390790060","https://openalex.org/W2134191509","https://openalex.org/W2314146950","https://openalex.org/W3209454962","https://openalex.org/W2582837249","https://openalex.org/W4386826224"],"abstract_inverted_index":{"The":[0,24,56,92,107,130,178],"Edinburgh":[1],"Mouse":[2,124,159,179],"Atlas":[3,125,160,180],"Project":[4],"(EMAP)":[5],"has":[6],"developed":[7],"a":[8,16,41,59,90,102,111,154,175],"digital":[9],"atlas":[10,76,94],"of":[11,32,39,44,53,104,110,113,118,140],"mouse":[12,34,93],"development":[13,186],"which":[14,119],"provides":[15],"bioinformatics":[17,156],"framework":[18,61],"to":[19,80,166,199],"spatially":[20,72],"reference":[21],"biological":[22],"data.":[23,64],"EMAP":[25],"core":[26],"database":[27,70,150],"contains":[28],"3D":[29,50,86],"grey-level":[30],"reconstructions":[31,57],"the":[33,45,54,75,78,85,123,158,170,189],"embryo":[35,46,87],"at":[36,188],"various":[37],"stages":[38],"development,":[40],"systematic":[42],"nomenclature":[43],"anatomy,":[47],"and":[48,95,115,185,202],"defined":[49],"regions":[51],"(domains)":[52],"embryo.":[55],"define":[58],"spatial":[60],"for":[62],"mapping":[63],"Data":[65,143],"front":[66],"an":[67,148,182],"in-situ":[68],"gene-expression":[69,82,96],"is":[71,133,174,181,205],"mapped":[73],"onto":[74],"allowing":[77],"users":[79],"query":[81],"patterns":[83],"using":[84],"model":[88],"as":[89],"reference.":[91],"databases":[97,201],"are":[98,128,144],"publicly":[99],"accessible":[100,165],"through":[101,207],"set":[103,112],"Web-based":[105],"tools.":[106],"system":[108,151,161],"consists":[109],"tools":[114],"databases,":[116],"some":[117],"reside":[120],"locally":[121],"on":[122],"hosts,":[126],"others":[127],"remote.":[129],"middleware":[131],"layer":[132],"primarily":[134,145],"CORBA-based,":[135],"but":[136],"also":[137],"makes":[138],"use":[139],"Java":[141],"servlets.":[142],"stored":[146],"in":[147,196],"object-oriented":[149],"(ObjectStore).":[152],"As":[153],"public":[155],"resource,":[157],"must":[162],"be":[163],"easily":[164],"researchers":[167],"all":[168],"over":[169],"world,":[171],"hence":[172],"interoperability":[173],"key":[176],"issue.":[177],"on-going":[183],"research":[184],"project":[187],"Medical":[190],"Research":[191],"Council,":[192],"Human":[193],"Genetics":[194],"Unit,":[195],"Edinburgh.":[197],"Access":[198],"its":[200,208],"further":[203],"information":[204],"available":[206],"Web":[209],"site.":[210]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
