{"id":"https://openalex.org/W3204805844","doi":"https://doi.org/10.1109/ssci50451.2021.9660161","title":"FoodChem: A food-chemical relation extraction model","display_name":"FoodChem: A food-chemical relation extraction model","publication_year":2021,"publication_date":"2021-12-05","ids":{"openalex":"https://openalex.org/W3204805844","doi":"https://doi.org/10.1109/ssci50451.2021.9660161","mag":"3204805844"},"language":"en","primary_location":{"id":"doi:10.1109/ssci50451.2021.9660161","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ssci50451.2021.9660161","pdf_url":null,"source":{"id":"https://openalex.org/S4363604921","display_name":"2021 IEEE Symposium Series on Computational Intelligence (SSCI)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE Symposium Series on Computational Intelligence (SSCI)","raw_type":"proceedings-article"},"type":"preprint","indexed_in":["arxiv","crossref","datacite"],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://arxiv.org/pdf/2110.02019","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066396028","display_name":"Gjorgjina Cenikj","orcid":"https://orcid.org/0000-0002-2723-0821"},"institutions":[{"id":"https://openalex.org/I3006985408","display_name":"Jo\u017eef Stefan Institute","ror":"https://ror.org/05060sz93","country_code":"SI","type":"facility","lineage":["https://openalex.org/I3006985408"]},{"id":"https://openalex.org/I4210113529","display_name":"Jo\u017eef Stefan International Postgraduate School","ror":"https://ror.org/01hdkb925","country_code":"SI","type":"education","lineage":["https://openalex.org/I4210113529"]}],"countries":["SI"],"is_corresponding":true,"raw_author_name":"Gjorgjina Cenikj","raw_affiliation_strings":["Jo\u017eef Stefan Institute, Ljubljana, Slovenia","Jo\u017eef Stefan International Postgraduate School, Ljubljana, Slovenia","Jo\u017eef Stefan Institute"],"affiliations":[{"raw_affiliation_string":"Jo\u017eef Stefan Institute, Ljubljana, Slovenia","institution_ids":["https://openalex.org/I3006985408"]},{"raw_affiliation_string":"Jo\u017eef Stefan International Postgraduate School, Ljubljana, Slovenia","institution_ids":["https://openalex.org/I4210113529"]},{"raw_affiliation_string":"Jo\u017eef Stefan Institute","institution_ids":["https://openalex.org/I3006985408"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015630848","display_name":"B. Korousic-Seljak","orcid":null},"institutions":[{"id":"https://openalex.org/I3006985408","display_name":"Jo\u017eef Stefan Institute","ror":"https://ror.org/05060sz93","country_code":"SI","type":"facility","lineage":["https://openalex.org/I3006985408"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Barbara Korousic Seljak","raw_affiliation_strings":["Jo\u017eef Stefan Institute, Ljubljana, Slovenia","Jo\u017eef Stefan Institute"],"affiliations":[{"raw_affiliation_string":"Jo\u017eef Stefan Institute, Ljubljana, Slovenia","institution_ids":["https://openalex.org/I3006985408"]},{"raw_affiliation_string":"Jo\u017eef Stefan Institute","institution_ids":["https://openalex.org/I3006985408"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5082115266","display_name":"Tome Eftimov","orcid":"https://orcid.org/0000-0001-7330-1902"},"institutions":[{"id":"https://openalex.org/I3006985408","display_name":"Jo\u017eef Stefan Institute","ror":"https://ror.org/05060sz93","country_code":"SI","type":"facility","lineage":["https://openalex.org/I3006985408"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Tome Eftimov","raw_affiliation_strings":["Jo\u017eef Stefan Institute, Ljubljana, Slovenia","Jo\u017eef Stefan Institute"],"affiliations":[{"raw_affiliation_string":"Jo\u017eef Stefan Institute, Ljubljana, Slovenia","institution_ids":["https://openalex.org/I3006985408"]},{"raw_affiliation_string":"Jo\u017eef Stefan Institute","institution_ids":["https://openalex.org/I3006985408"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5066396028"],"corresponding_institution_ids":["https://openalex.org/I3006985408","https://openalex.org/I4210113529"],"apc_list":null,"apc_paid":null,"fwci":0.2538,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.49884484,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13984","display_name":"Nutrition, Genetics, and Disease","score":0.9386000037193298,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7078703045845032},{"id":"https://openalex.org/keywords/voting","display_name":"Voting","score":0.5982734560966492},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.5420556664466858},{"id":"https://openalex.org/keywords/macro","display_name":"Macro","score":0.5180799961090088},{"id":"https://openalex.org/keywords/relationship-extraction","display_name":"Relationship extraction","score":0.485320508480072},{"id":"https://openalex.org/keywords/transformer","display_name":"Transformer","score":0.45943090319633484},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4559841454029083},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.41766875982284546},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3812263309955597},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.36950504779815674},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3693370819091797},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.36050379276275635}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7078703045845032},{"id":"https://openalex.org/C520049643","wikidata":"https://www.wikidata.org/wiki/Q189760","display_name":"Voting","level":3,"score":0.5982734560966492},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.5420556664466858},{"id":"https://openalex.org/C166955791","wikidata":"https://www.wikidata.org/wiki/Q629579","display_name":"Macro","level":2,"score":0.5180799961090088},{"id":"https://openalex.org/C153604712","wikidata":"https://www.wikidata.org/wiki/Q7310755","display_name":"Relationship extraction","level":3,"score":0.485320508480072},{"id":"https://openalex.org/C66322947","wikidata":"https://www.wikidata.org/wiki/Q11658","display_name":"Transformer","level":3,"score":0.45943090319633484},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4559841454029083},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.41766875982284546},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3812263309955597},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.36950504779815674},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3693370819091797},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.36050379276275635},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C165801399","wikidata":"https://www.wikidata.org/wiki/Q25428","display_name":"Voltage","level":2,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1109/ssci50451.2021.9660161","is_oa":false,"landing_page_url":"https://doi.org/10.1109/ssci50451.2021.9660161","pdf_url":null,"source":{"id":"https://openalex.org/S4363604921","display_name":"2021 IEEE Symposium Series on Computational Intelligence (SSCI)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"conference"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE Symposium Series on Computational Intelligence (SSCI)","raw_type":"proceedings-article"},{"id":"pmh:oai:arXiv.org:2110.02019","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2110.02019","pdf_url":"https://arxiv.org/pdf/2110.02019","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"mag:3204805844","is_oa":true,"landing_page_url":"https://arxiv.org/pdf/2110.02019.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"arXiv (Cornell University)","raw_type":null},{"id":"doi:10.48550/arxiv.2110.02019","is_oa":true,"landing_page_url":"https://doi.org/10.48550/arxiv.2110.02019","pdf_url":null,"source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"pmh:oai:arXiv.org:2110.02019","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2110.02019","pdf_url":"https://arxiv.org/pdf/2110.02019","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/2","display_name":"Zero hunger","score":0.5899999737739563}],"awards":[{"id":"https://openalex.org/G1093674026","display_name":null,"funder_award_id":"agreement","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G1697115794","display_name":"SELECTS 2003: Federal elections 2003","funder_award_id":"101005","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G2842207344","display_name":null,"funder_award_id":"GP/EFSA/AMU/2020/03/LOT2","funder_id":"https://openalex.org/F4320315318","funder_display_name":"European Food Safety Authority"},{"id":"https://openalex.org/G3893349104","display_name":null,"funder_award_id":"101005259","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G4956428346","display_name":null,"funder_award_id":"Horizon 2020 research and innovatio","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5389036960","display_name":null,"funder_award_id":"10052","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G6902825238","display_name":"Synthese amphiphiler Redoxchromophore zur photo- chemischen Lichtenergieumwandlung.","funder_award_id":"10100","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G791504897","display_name":null,"funder_award_id":"P2-0098","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"},{"id":"https://openalex.org/G7941628531","display_name":null,"funder_award_id":"863059","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G8318064016","display_name":null,"funder_award_id":"Horizon","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320315318","display_name":"European Food Safety Authority","ror":"https://ror.org/056nc1c48"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320322554","display_name":"Javna Agencija za Raziskovalno Dejavnost RS","ror":"https://ror.org/059bp8k51"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3204805844.pdf","grobid_xml":"https://content.openalex.org/works/W3204805844.grobid-xml"},"referenced_works_count":50,"referenced_works":["https://openalex.org/W1538085078","https://openalex.org/W1566289585","https://openalex.org/W1976316416","https://openalex.org/W2044710940","https://openalex.org/W2057954853","https://openalex.org/W2085809930","https://openalex.org/W2095660297","https://openalex.org/W2097379344","https://openalex.org/W2117671454","https://openalex.org/W2142678031","https://openalex.org/W2168943507","https://openalex.org/W2232218540","https://openalex.org/W2251926609","https://openalex.org/W2279620300","https://openalex.org/W2576709238","https://openalex.org/W2626256289","https://openalex.org/W2805206884","https://openalex.org/W2809349863","https://openalex.org/W2841315182","https://openalex.org/W2883380892","https://openalex.org/W2895889524","https://openalex.org/W2911489562","https://openalex.org/W2913694513","https://openalex.org/W2943495877","https://openalex.org/W2947858052","https://openalex.org/W2950021574","https://openalex.org/W2963341956","https://openalex.org/W2964341631","https://openalex.org/W2965373594","https://openalex.org/W2979826702","https://openalex.org/W2986127174","https://openalex.org/W3090897281","https://openalex.org/W3097145107","https://openalex.org/W3098012550","https://openalex.org/W3098824823","https://openalex.org/W3124526187","https://openalex.org/W3124608917","https://openalex.org/W3136048214","https://openalex.org/W3171960862","https://openalex.org/W4229658977","https://openalex.org/W4248193078","https://openalex.org/W6674326314","https://openalex.org/W6674753235","https://openalex.org/W6681351124","https://openalex.org/W6691972604","https://openalex.org/W6731832869","https://openalex.org/W6752030624","https://openalex.org/W6755207826","https://openalex.org/W6759197907","https://openalex.org/W6766673545"],"related_works":["https://openalex.org/W3027691400","https://openalex.org/W2331879489","https://openalex.org/W2290604269","https://openalex.org/W2092922846","https://openalex.org/W2976831742","https://openalex.org/W1868952759","https://openalex.org/W2785265351","https://openalex.org/W3182725928","https://openalex.org/W2115083313","https://openalex.org/W2104438213","https://openalex.org/W3030286493","https://openalex.org/W3208527886","https://openalex.org/W1498682480","https://openalex.org/W2408023948","https://openalex.org/W2338589652","https://openalex.org/W2954994130","https://openalex.org/W2407783028","https://openalex.org/W2098308736","https://openalex.org/W3098451043","https://openalex.org/W2950609341"],"abstract_inverted_index":{"In":[0],"this":[1],"paper,":[2],"we":[3,107],"present":[4,15],"FoodChem,":[5],"a":[6,38,51,69,83,93,139],"new":[7],"Relation":[8],"Extraction":[9],"(RE)":[10],"model":[11,133],"for":[12,109,122],"identifying":[13,44],"chemicals":[14],"in":[16,27,76,82,96,146],"the":[17,46,100,104,111,115,127,131,135,147],"composition":[18],"of":[19,103,126,144],"food":[20],"entities,":[21],"based":[22],"on":[23],"textual":[24],"information":[25],"provided":[26],"biomedical":[28],"peer-reviewed":[29],"scientific":[30],"literature.":[31],"The":[32,88],"RE":[33],"task":[34],"is":[35,56,80,120],"treated":[36],"as":[37],"binary":[39],"classification":[40],"problem,":[41],"aimed":[42],"at":[43],"whether":[45],"contains":[47,74],"relation":[48],"exists":[49],"between":[50],"food-chemical":[52,77],"entity":[53,78],"pair.":[54],"This":[55],"accomplished":[57],"by":[58],"fine-tuning":[59],"BERT,":[60],"BioBERT":[61,132],"and":[62,85],"RoBERTa":[63],"transformer":[64],"models.":[65],"For":[66],"evaluation":[67],"purposes,":[68],"novel":[70],"dataset":[71,105],"with":[72,138],"annotated":[73,117],"relations":[75],"pairs":[79],"generated,":[81],"golden":[84,118],"silver":[86,101],"version.":[87],"models":[89],"are":[90],"integrated":[91],"into":[92],"voting":[94],"scheme":[95],"order":[97],"to":[98],"produce":[99],"version":[102,119],"which":[106],"use":[108],"augmenting":[110],"individual":[112],"models,":[113,130],"while":[114],"manually":[116],"used":[121],"their":[123],"evaluation.":[124],"Out":[125],"three":[128],"evaluated":[129],"achieves":[134],"best":[136],"results,":[137],"macro":[140],"averaged":[141],"F1":[142],"score":[143],"0.902":[145],"unbalanced":[148],"augmentation":[149],"setting.":[150]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-04-13T07:58:08.660418","created_date":"2025-10-10T00:00:00"}
