{"id":"https://openalex.org/W7125962821","doi":"https://doi.org/10.1109/smc58881.2025.11343709","title":"Leveraging Clinical Notes with Medical NER for Treatment Recommendation","display_name":"Leveraging Clinical Notes with Medical NER for Treatment Recommendation","publication_year":2025,"publication_date":"2025-10-05","ids":{"openalex":"https://openalex.org/W7125962821","doi":"https://doi.org/10.1109/smc58881.2025.11343709"},"language":null,"primary_location":{"id":"doi:10.1109/smc58881.2025.11343709","is_oa":false,"landing_page_url":"https://doi.org/10.1109/smc58881.2025.11343709","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Conference on Systems, Man, and Cybernetics (SMC)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5124061590","display_name":"Muhammad A. Saleem","orcid":null},"institutions":[{"id":"https://openalex.org/I134784518","display_name":"Institute of Business Administration Karachi","ror":"https://ror.org/03egfpm06","country_code":"PK","type":"education","lineage":["https://openalex.org/I134784518"]}],"countries":["PK"],"is_corresponding":true,"raw_author_name":"Muhammad A. Saleem","raw_affiliation_strings":["IBA,AI Lab, School of Mathematics and Computer Science,Karachi,Pakistan"],"affiliations":[{"raw_affiliation_string":"IBA,AI Lab, School of Mathematics and Computer Science,Karachi,Pakistan","institution_ids":["https://openalex.org/I134784518"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059105394","display_name":"Syed Ali Raza","orcid":"https://orcid.org/0000-0001-6570-4808"},"institutions":[{"id":"https://openalex.org/I134784518","display_name":"Institute of Business Administration Karachi","ror":"https://ror.org/03egfpm06","country_code":"PK","type":"education","lineage":["https://openalex.org/I134784518"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Syed A. Raza","raw_affiliation_strings":["IBA,AI Lab, School of Mathematics and Computer Science,Karachi,Pakistan"],"affiliations":[{"raw_affiliation_string":"IBA,AI Lab, School of Mathematics and Computer Science,Karachi,Pakistan","institution_ids":["https://openalex.org/I134784518"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5124117233","display_name":"Sajjad Haider","orcid":null},"institutions":[{"id":"https://openalex.org/I134784518","display_name":"Institute of Business Administration Karachi","ror":"https://ror.org/03egfpm06","country_code":"PK","type":"education","lineage":["https://openalex.org/I134784518"]}],"countries":["PK"],"is_corresponding":false,"raw_author_name":"Sajjad Haider","raw_affiliation_strings":["IBA,AI Lab, School of Mathematics and Computer Science,Karachi,Pakistan"],"affiliations":[{"raw_affiliation_string":"IBA,AI Lab, School of Mathematics and Computer Science,Karachi,Pakistan","institution_ids":["https://openalex.org/I134784518"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5124061590"],"corresponding_institution_ids":["https://openalex.org/I134784518"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.87264798,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"2628","last_page":"2633"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.8162000179290771,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.8162000179290771,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.09200000017881393,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.007799999788403511,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/recommender-system","display_name":"Recommender system","score":0.6370999813079834},{"id":"https://openalex.org/keywords/association-rule-learning","display_name":"Association rule learning","score":0.5467000007629395},{"id":"https://openalex.org/keywords/coding","display_name":"Coding (social sciences)","score":0.4909999966621399},{"id":"https://openalex.org/keywords/collaborative-filtering","display_name":"Collaborative filtering","score":0.4185999929904938},{"id":"https://openalex.org/keywords/apriori-algorithm","display_name":"Apriori algorithm","score":0.4142000079154968},{"id":"https://openalex.org/keywords/medical-classification","display_name":"Medical classification","score":0.40450000762939453},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.33889999985694885},{"id":"https://openalex.org/keywords/named-entity-recognition","display_name":"Named-entity recognition","score":0.32899999618530273}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6373999714851379},{"id":"https://openalex.org/C557471498","wikidata":"https://www.wikidata.org/wiki/Q554950","display_name":"Recommender system","level":2,"score":0.6370999813079834},{"id":"https://openalex.org/C193524817","wikidata":"https://www.wikidata.org/wiki/Q386780","display_name":"Association rule learning","level":2,"score":0.5467000007629395},{"id":"https://openalex.org/C179518139","wikidata":"https://www.wikidata.org/wiki/Q5140297","display_name":"Coding (social sciences)","level":2,"score":0.4909999966621399},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4223000109195709},{"id":"https://openalex.org/C21569690","wikidata":"https://www.wikidata.org/wiki/Q94702","display_name":"Collaborative filtering","level":3,"score":0.4185999929904938},{"id":"https://openalex.org/C81440476","wikidata":"https://www.wikidata.org/wiki/Q513511","display_name":"Apriori algorithm","level":3,"score":0.4142000079154968},{"id":"https://openalex.org/C154874363","wikidata":"https://www.wikidata.org/wiki/Q3518464","display_name":"Medical classification","level":2,"score":0.40450000762939453},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34200000762939453},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.33889999985694885},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3312000036239624},{"id":"https://openalex.org/C2779135771","wikidata":"https://www.wikidata.org/wiki/Q403574","display_name":"Named-entity recognition","level":3,"score":0.32899999618530273},{"id":"https://openalex.org/C195910791","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Medical record","level":2,"score":0.2922999858856201},{"id":"https://openalex.org/C75553542","wikidata":"https://www.wikidata.org/wiki/Q178161","display_name":"A priori and a posteriori","level":2,"score":0.29100000858306885},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.28690001368522644},{"id":"https://openalex.org/C2982822547","wikidata":"https://www.wikidata.org/wiki/Q179661","display_name":"Medical treatment","level":2,"score":0.2694000005722046},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.2637999951839447},{"id":"https://openalex.org/C535046627","wikidata":"https://www.wikidata.org/wiki/Q30612","display_name":"Clinical trial","level":2,"score":0.26109999418258667},{"id":"https://openalex.org/C3018949938","wikidata":"https://www.wikidata.org/wiki/Q17166101","display_name":"Text messaging","level":2,"score":0.25679999589920044},{"id":"https://openalex.org/C171686336","wikidata":"https://www.wikidata.org/wiki/Q3532085","display_name":"Topic model","level":2,"score":0.25049999356269836}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/smc58881.2025.11343709","is_oa":false,"landing_page_url":"https://doi.org/10.1109/smc58881.2025.11343709","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2025 IEEE International Conference on Systems, Man, and Cybernetics (SMC)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":11,"referenced_works":["https://openalex.org/W2142901177","https://openalex.org/W2154530191","https://openalex.org/W2799462250","https://openalex.org/W2965570621","https://openalex.org/W2970771982","https://openalex.org/W3131013500","https://openalex.org/W4200046635","https://openalex.org/W4281749723","https://openalex.org/W4311829616","https://openalex.org/W4312201996","https://openalex.org/W4402731098"],"related_works":[],"abstract_inverted_index":{"Treatment":[0],"recommendation":[1,59],"systems":[2,115],"often":[3],"depend":[4],"on":[5,74],"structured,":[6],"multi-visit":[7],"data":[8],"and":[9,46,54,64,81,87],"standardized":[10],"coding":[11],"(e.g.,":[12],"ICD-10),":[13],"which":[14],"are":[15],"scarce":[16],"in":[17,120],"low-resource":[18,121],"settings.":[19],"This":[20],"study":[21],"explores":[22],"the":[23,104,107],"use":[24],"of":[25,109],"raw":[26],"clinical":[27,118],"notes":[28],"paired":[29],"with":[30],"medical":[31],"named":[32],"entity":[33],"recognition":[34],"(NER)":[35],"as":[36],"a":[37,47],"practical":[38],"alternative.":[39],"We":[40],"evaluated":[41],"three":[42],"transformer-based":[43],"NER":[44],"models":[45],"combined":[48],"model":[49],"(AMC)":[50],"to":[51,69,101],"extract":[52],"problem":[53],"treatment":[55,71,113],"entities.":[56,76],"Two":[57],"interpretable":[58],"techniques\u2014Apriori":[60],"association":[61],"rule":[62],"mining":[63],"collaborative":[65,91],"filtering\u2014were":[66],"then":[67],"applied":[68],"assess":[70],"recommendations":[72],"based":[73],"these":[75],"Results":[77],"showed":[78],"that":[79],"SciBERT":[80],"AMC":[82],"identified":[83],"more":[84],"unique":[85],"entities,":[86],"Apriori":[88],"generally":[89],"outperformed":[90],"filtering,":[92],"especially":[93],"under":[94],"datasparse":[95],"conditions.":[96],"Despite":[97],"suboptimal":[98],"performance":[99],"due":[100],"dataset":[102],"limitations,":[103],"approach":[105],"demonstrates":[106],"feasibility":[108],"building":[110],"accessible,":[111],"explainable":[112],"recommender":[114],"using":[116],"unstructured":[117],"text":[119],"environments.":[122]},"counts_by_year":[],"updated_date":"2026-01-29T23:17:01.242718","created_date":"2026-01-29T00:00:00"}
