{"id":"https://openalex.org/W4400908465","doi":"https://doi.org/10.1109/siu61531.2024.10601041","title":"Classification of Breast Cancer Molecular Subtypes with Grouping-Scoring-Modeling Approach that Incorporates Disease-Disease Association Information","display_name":"Classification of Breast Cancer Molecular Subtypes with Grouping-Scoring-Modeling Approach that Incorporates Disease-Disease Association Information","publication_year":2024,"publication_date":"2024-05-15","ids":{"openalex":"https://openalex.org/W4400908465","doi":"https://doi.org/10.1109/siu61531.2024.10601041"},"language":"en","primary_location":{"id":"doi:10.1109/siu61531.2024.10601041","is_oa":false,"landing_page_url":"https://doi.org/10.1109/siu61531.2024.10601041","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 32nd Signal Processing and Communications Applications Conference (SIU)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082413447","display_name":"Emma Qumsiyeh","orcid":"https://orcid.org/0000-0002-3797-5851"},"institutions":[{"id":"https://openalex.org/I21215505","display_name":"Al-Quds University","ror":"https://ror.org/04hym7e04","country_code":"PS","type":"education","lineage":["https://openalex.org/I21215505"]}],"countries":["PS"],"is_corresponding":true,"raw_author_name":"Emma Qumsiyeh","raw_affiliation_strings":["Al-Quds University,Department of Computer Science and Information Technology,Jerusalem,Palestine"],"affiliations":[{"raw_affiliation_string":"Al-Quds University,Department of Computer Science and Information Technology,Jerusalem,Palestine","institution_ids":["https://openalex.org/I21215505"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046915342","display_name":"Burcu Bak\u0131r-G\u00fcng\u00f6r","orcid":"https://orcid.org/0000-0002-2272-6270"},"institutions":[{"id":"https://openalex.org/I95293974","display_name":"Abdullah G\u00fcl University","ror":"https://ror.org/00zdyy359","country_code":"TR","type":"education","lineage":["https://openalex.org/I95293974"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Burcu Bakir-Gungor","raw_affiliation_strings":["Abdullah Gul University,Department of Computer Engineering Faculty of Engineering,Kayseri,Turkey"],"affiliations":[{"raw_affiliation_string":"Abdullah Gul University,Department of Computer Engineering Faculty of Engineering,Kayseri,Turkey","institution_ids":["https://openalex.org/I95293974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091900270","display_name":"Malik Yousef","orcid":"https://orcid.org/0000-0001-8780-6303"},"institutions":[{"id":"https://openalex.org/I4210138950","display_name":"Zefat Academic College","ror":"https://ror.org/03syp5w68","country_code":"IL","type":"education","lineage":["https://openalex.org/I4210138950"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Malik Yousef","raw_affiliation_strings":["Galilee Digital Health Research Center Zefat Academic College,Department of Information Systems,Zefat,Israel"],"affiliations":[{"raw_affiliation_string":"Galilee Digital Health Research Center Zefat Academic College,Department of Information Systems,Zefat,Israel","institution_ids":["https://openalex.org/I4210138950"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5082413447"],"corresponding_institution_ids":["https://openalex.org/I21215505"],"apc_list":null,"apc_paid":null,"fwci":0.7608,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.73518831,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9387000203132629,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9387000203132629,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.925599992275238,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9000999927520752,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.7370089888572693},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.6367003917694092},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.5969843864440918},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.501941442489624},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.469982773065567},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.406758189201355},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3765691816806793},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3532702326774597},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.18959170579910278},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.123497873544693},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.10547420382499695}],"concepts":[{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.7370089888572693},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.6367003917694092},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.5969843864440918},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.501941442489624},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.469982773065567},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.406758189201355},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3765691816806793},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3532702326774597},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.18959170579910278},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.123497873544693},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.10547420382499695},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/siu61531.2024.10601041","is_oa":false,"landing_page_url":"https://doi.org/10.1109/siu61531.2024.10601041","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2024 32nd Signal Processing and Communications Applications Conference (SIU)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.46000000834465027},{"id":"https://metadata.un.org/sdg/5","display_name":"Gender equality","score":0.4399999976158142}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":43,"referenced_works":["https://openalex.org/W1485321296","https://openalex.org/W1981491391","https://openalex.org/W2016401407","https://openalex.org/W2051725773","https://openalex.org/W2114104545","https://openalex.org/W2118258530","https://openalex.org/W2132619562","https://openalex.org/W2146511318","https://openalex.org/W2146545950","https://openalex.org/W2154053567","https://openalex.org/W2170892256","https://openalex.org/W2295598076","https://openalex.org/W2338607938","https://openalex.org/W2537679995","https://openalex.org/W2912411326","https://openalex.org/W2924234733","https://openalex.org/W3028304854","https://openalex.org/W3047810072","https://openalex.org/W3048293140","https://openalex.org/W3092024150","https://openalex.org/W3094371180","https://openalex.org/W3112932631","https://openalex.org/W3130229455","https://openalex.org/W3161753189","https://openalex.org/W3193347331","https://openalex.org/W3199834670","https://openalex.org/W4206091887","https://openalex.org/W4223626639","https://openalex.org/W4224243421","https://openalex.org/W4283203935","https://openalex.org/W4309400074","https://openalex.org/W4315796535","https://openalex.org/W4323241210","https://openalex.org/W4324378550","https://openalex.org/W4377138743","https://openalex.org/W4379966808","https://openalex.org/W4384525165","https://openalex.org/W4388914950","https://openalex.org/W4388940431","https://openalex.org/W4390970401","https://openalex.org/W6636914306","https://openalex.org/W6810884583","https://openalex.org/W6852541876"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2352440174","https://openalex.org/W4309440960","https://openalex.org/W2062168445","https://openalex.org/W2375584271","https://openalex.org/W1997105855","https://openalex.org/W2348940229","https://openalex.org/W2363046693","https://openalex.org/W2389491697","https://openalex.org/W4301030387"],"abstract_inverted_index":{"This":[0],"study":[1,45],"uses":[2],"modern":[3],"sequencing":[4],"technology":[5],"and":[6,24,69,96,119,155],"large":[7],"biological":[8,124],"databases":[9,23],"to":[10,29,53,115],"investigate":[11],"the":[12,26,73,99,107,145],"molecular":[13,33],"intricacies":[14,109],"of":[15,94,110],"complicated":[16],"diseases":[17],"like":[18],"cancer.":[19,112],"Using":[20,40],"gene":[21,79],"expression":[22],"biomarkers,":[25],"research":[27,142],"aims":[28],"improve":[30,116],"breast":[31,111],"cancer":[32],"subtype":[34],"identification":[35,121],"for":[36],"better":[37],"patient":[38],"outcomes.":[39],"BRCA":[41],"LumAB_Her2Basal":[42],"dataset,":[43],"this":[44],"compares":[46],"an":[47],"integrative":[48,137],"machine":[49,59],"learning-based":[50],"strategy":[51],"(GediNET)":[52],"traditional":[54,130],"feature":[55],"selection":[56],"approaches":[57],"across":[58],"learning":[60],"classifiers.":[61],"GediNET":[62],"excels":[63],"at":[64],"uncovering":[65,106],"crucial":[66],"disease-disease":[67],"connections":[68],"potential":[70],"biomarkers":[71],"using":[72],"Grouping-Scoring-Modeling":[74],"(GSM)":[75],"approach,":[76],"which":[77],"favors":[78],"groupings":[80],"above":[81],"individual":[82],"genes.":[83],"Our":[84],"comparative":[85],"analysis":[86],"highlights":[87],"GediNET\u2019s":[88,113,136],"exceptional":[89],"performance,":[90],"notably":[91],"in":[92,105],"terms":[93],"accuracy":[95],"Area":[97],"Under":[98],"Curve":[100],"metrics,":[101],"underscoring":[102],"its":[103],"effectiveness":[104],"genetic":[108],"promise":[114],"disease":[117],"classification":[118],"biomarker":[120],"by":[122,143],"improving":[123],"mechanism":[125],"understanding":[126],"goes":[127],"beyond":[128],"exceeding":[129],"approaches.":[131],"The":[132],"work":[133],"shows":[134],"that":[135],"method":[138],"can":[139],"promote":[140],"bioinformatics":[141],"identifying":[144],"most":[146],"informative":[147],"genes":[148],"associated":[149],"with":[150],"certain":[151],"diseases,":[152],"enabling":[153],"focused":[154],"customized":[156],"medicine.":[157]},"counts_by_year":[{"year":2025,"cited_by_count":2}],"updated_date":"2025-12-26T23:08:49.675405","created_date":"2025-10-10T00:00:00"}
