{"id":"https://openalex.org/W2026100781","doi":"https://doi.org/10.1109/siu.2014.6830632","title":"Incorporating triple resonance experiment data into NVR for NMR protein structure-based assignments","display_name":"Incorporating triple resonance experiment data into NVR for NMR protein structure-based assignments","publication_year":2014,"publication_date":"2014-04-01","ids":{"openalex":"https://openalex.org/W2026100781","doi":"https://doi.org/10.1109/siu.2014.6830632","mag":"2026100781"},"language":"en","primary_location":{"id":"doi:10.1109/siu.2014.6830632","is_oa":false,"landing_page_url":"https://doi.org/10.1109/siu.2014.6830632","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 22nd Signal Processing and Communications Applications Conference (SIU)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076388270","display_name":"\u015eeyma Nur Ekren","orcid":null},"institutions":[{"id":"https://openalex.org/I13419840","display_name":"Istanbul \u015eehir University","ror":"https://ror.org/020ddy191","country_code":"TR","type":"education","lineage":["https://openalex.org/I13419840"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Seyma Nur Ekren","raw_affiliation_strings":["M\u00fchendislik ve Do\u011fa Bilimleri Fak\u00fcltesi, \u0130stanbul \u015eehir \u00dcniversitesi, \u0130stanbul, T\u00dcRK\u0130YE"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"M\u00fchendislik ve Do\u011fa Bilimleri Fak\u00fcltesi, \u0130stanbul \u015eehir \u00dcniversitesi, \u0130stanbul, T\u00dcRK\u0130YE","institution_ids":["https://openalex.org/I13419840"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022556437","display_name":"Mehmet Serkan Apayd\u0131n","orcid":"https://orcid.org/0000-0002-4707-8994"},"institutions":[{"id":"https://openalex.org/I13419840","display_name":"Istanbul \u015eehir University","ror":"https://ror.org/020ddy191","country_code":"TR","type":"education","lineage":["https://openalex.org/I13419840"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Mehmet Serkan Apaydin","raw_affiliation_strings":["M\u00fchendislik ve Do\u011fa Bilimleri Fak\u00fcltesi, \u0130stanbul \u015eehir \u00dcniversitesi, \u0130stanbul, T\u00dcRK\u0130YE"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"M\u00fchendislik ve Do\u011fa Bilimleri Fak\u00fcltesi, \u0130stanbul \u015eehir \u00dcniversitesi, \u0130stanbul, T\u00dcRK\u0130YE","institution_ids":["https://openalex.org/I13419840"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I13419840"],"apc_list":null,"apc_paid":null,"fwci":null,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":null,"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"1926","last_page":"1929"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5029045939445496},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4368540644645691},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.40885424613952637},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.35002291202545166},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33661359548568726},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2905798554420471},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.14258164167404175},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08036822080612183}],"concepts":[{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5029045939445496},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4368540644645691},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.40885424613952637},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.35002291202545166},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33661359548568726},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2905798554420471},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.14258164167404175},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08036822080612183}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/siu.2014.6830632","is_oa":false,"landing_page_url":"https://doi.org/10.1109/siu.2014.6830632","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2014 22nd Signal Processing and Communications Applications Conference (SIU)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":7,"referenced_works":["https://openalex.org/W1564865013","https://openalex.org/W1979749103","https://openalex.org/W1985335558","https://openalex.org/W2021829433","https://openalex.org/W2101574921","https://openalex.org/W2135307619","https://openalex.org/W2319226565"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2748952813","https://openalex.org/W2051487156","https://openalex.org/W2073681303","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W4396701345","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W4396696052"],"abstract_inverted_index":{"In":[0,74],"NVR":[1,40,86],"which":[2,132],"is":[3,71],"an":[4],"NMR":[5],"protein":[6,101],"structure":[7],"based":[8],"assignment":[9,53,140],"program,":[10,41],"only":[11],"N":[12],"<sup":[13,30,66,80,124,161],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[14,31,67,81,125,162],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">15</sup>":[15],"labeled":[16,33,69,83,127,164],"data":[17,70,84,128,165],"has":[18],"been":[19,46,167],"used":[20,47],"until":[21],"now":[22],"due":[23],"to":[24,137],"the":[25,89,116,139,149,154],"cost":[26],"of":[27,39,55],"acquiring":[28],"C":[29,65,79,123,160],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">13</sup>":[32,68,82,126,163],"data.":[34],"Besides,":[35],"in":[36],"score":[37,156],"function":[38,157],"manually":[42],"set":[43],"parameters":[44],"have":[45,104,113,146,166],"for":[48,109,118],"different":[49,107,110],"proteins":[50],"while":[51],"calculating":[52],"probability":[54],"atoms.":[56],"Nowadays,":[57],"triple":[58],"resonance":[59],"experiments":[60],"are":[61],"standardized":[62],"and":[63,121],"obtaining":[64],"getting":[72],"easier.":[73],"this":[75],"work,":[76],"we":[77,103,145],"incorporated":[78],"into":[85],"program.":[87],"At":[88],"same":[90],"time,":[91],"by":[92,129,158],"using":[93,106,130,159],"new":[94,150,155],"statistical":[95],"values":[96],"obtained":[97,152],"from":[98],"a":[99,143],"larger":[100],"database,":[102],"prevented":[105],"coefficients":[108],"proteins.":[111],"We":[112],"carried":[114],"out":[115],"assignments":[117],"ubiquitin":[119],"with":[120,153],"without":[122],"NVR-BIP":[131],"applies":[133],"binary":[134],"integer":[135],"programming":[136],"solve":[138],"problem.":[141],"As":[142],"result,":[144],"observed":[147],"that":[148],"results":[151],"improved.":[168]},"counts_by_year":[],"updated_date":"2026-07-14T23:27:15.235271","created_date":"2025-10-10T00:00:00"}
