{"id":"https://openalex.org/W4200006269","doi":"https://doi.org/10.1109/sibgrapi54419.2021.00025","title":"Automatic Segmentation of Posterior Fossa Structures in Pediatric Brain MRIs","display_name":"Automatic Segmentation of Posterior Fossa Structures in Pediatric Brain MRIs","publication_year":2021,"publication_date":"2021-10-01","ids":{"openalex":"https://openalex.org/W4200006269","doi":"https://doi.org/10.1109/sibgrapi54419.2021.00025"},"language":"en","primary_location":{"id":"doi:10.1109/sibgrapi54419.2021.00025","is_oa":false,"landing_page_url":"https://doi.org/10.1109/sibgrapi54419.2021.00025","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 34th SIBGRAPI Conference on Graphics, Patterns and Images (SIBGRAPI)","raw_type":"proceedings-article"},"type":"preprint","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5015805112","display_name":"Hugo Oliveira","orcid":"https://orcid.org/0000-0001-8760-9801"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Hugo Oliveira","raw_affiliation_strings":["Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil"],"affiliations":[{"raw_affiliation_string":"Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048768992","display_name":"Larissa de O. Penteado","orcid":null},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Larissa Penteado","raw_affiliation_strings":["Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil"],"affiliations":[{"raw_affiliation_string":"Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103282284","display_name":"Jose Luiz Maciel","orcid":"https://orcid.org/0000-0003-3043-5323"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Jose Luiz Maciel","raw_affiliation_strings":["Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil"],"affiliations":[{"raw_affiliation_string":"Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091411303","display_name":"Suely Fazio Ferraciolli","orcid":"https://orcid.org/0000-0001-5687-4186"},"institutions":[{"id":"https://openalex.org/I4210145268","display_name":"Hospital das Cl\u00ednicas da Faculdade de Medicina da Universidade de S\u00e3o Paulo","ror":"https://ror.org/03se9eg94","country_code":"BR","type":"healthcare","lineage":["https://openalex.org/I4210145268"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Suely Fazio Ferraciolli","raw_affiliation_strings":["Faculdade de Medicina, Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil"],"affiliations":[{"raw_affiliation_string":"Faculdade de Medicina, Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I4210145268"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051337753","display_name":"Marcelo Straus Takahashi","orcid":"https://orcid.org/0000-0001-9489-2844"},"institutions":[{"id":"https://openalex.org/I4210145268","display_name":"Hospital das Cl\u00ednicas da Faculdade de Medicina da Universidade de S\u00e3o Paulo","ror":"https://ror.org/03se9eg94","country_code":"BR","type":"healthcare","lineage":["https://openalex.org/I4210145268"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Marcelo Straus Takahashi","raw_affiliation_strings":["Faculdade de Medicina, Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil"],"affiliations":[{"raw_affiliation_string":"Faculdade de Medicina, Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I4210145268"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088407901","display_name":"Isabelle Bloch","orcid":"https://orcid.org/0000-0002-6984-1532"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210159731","display_name":"LIP6","ror":"https://ror.org/05krcen59","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I39804081","https://openalex.org/I4210159245","https://openalex.org/I4210159731"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Isabelle Bloch","raw_affiliation_strings":["Sorbonne Universit\u00e9, CNRS, LIP6, F-75005 Paris, France"],"affiliations":[{"raw_affiliation_string":"Sorbonne Universit\u00e9, CNRS, LIP6, F-75005 Paris, France","institution_ids":["https://openalex.org/I4210159731","https://openalex.org/I204730241","https://openalex.org/I1294671590","https://openalex.org/I39804081"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090955523","display_name":"Roberto M. C\u00e9sar","orcid":"https://orcid.org/0000-0003-2701-4288"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Roberto Cesar Junior","raw_affiliation_strings":["Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil"],"affiliations":[{"raw_affiliation_string":"Universidade de S\u00e3o Paulo, S\u00e3o Paulo, Brazil","institution_ids":["https://openalex.org/I17974374"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5015805112"],"corresponding_institution_ids":["https://openalex.org/I17974374"],"apc_list":null,"apc_paid":null,"fwci":0.51109739,"has_fulltext":false,"cited_by_count":5,"citation_normalized_percentile":{"value":0.66060438,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":null,"issue":null,"first_page":"121","last_page":"128"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10036","display_name":"Advanced Neural Network Applications","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11307","display_name":"Domain Adaptation and Few-Shot Learning","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12552","display_name":"Fetal and Pediatric Neurological Disorders","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/2735","display_name":"Pediatrics, Perinatology and Child Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7872136831283569},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.6596248745918274},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6589539051055908},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5690581202507019},{"id":"https://openalex.org/keywords/market-segmentation","display_name":"Market segmentation","score":0.5642996430397034},{"id":"https://openalex.org/keywords/magnetic-resonance-imaging","display_name":"Magnetic resonance imaging","score":0.46361973881721497},{"id":"https://openalex.org/keywords/image-segmentation","display_name":"Image segmentation","score":0.4309355616569519},{"id":"https://openalex.org/keywords/preprocessor","display_name":"Preprocessor","score":0.4275498390197754},{"id":"https://openalex.org/keywords/neuroimaging","display_name":"Neuroimaging","score":0.4175994396209717},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.40804779529571533},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2770831286907196},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.2632066011428833},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.22585636377334595},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.16566252708435059}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7872136831283569},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.6596248745918274},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6589539051055908},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5690581202507019},{"id":"https://openalex.org/C125308379","wikidata":"https://www.wikidata.org/wiki/Q363057","display_name":"Market segmentation","level":2,"score":0.5642996430397034},{"id":"https://openalex.org/C143409427","wikidata":"https://www.wikidata.org/wiki/Q161238","display_name":"Magnetic resonance imaging","level":2,"score":0.46361973881721497},{"id":"https://openalex.org/C124504099","wikidata":"https://www.wikidata.org/wiki/Q56933","display_name":"Image segmentation","level":3,"score":0.4309355616569519},{"id":"https://openalex.org/C34736171","wikidata":"https://www.wikidata.org/wiki/Q918333","display_name":"Preprocessor","level":2,"score":0.4275498390197754},{"id":"https://openalex.org/C58693492","wikidata":"https://www.wikidata.org/wiki/Q551875","display_name":"Neuroimaging","level":2,"score":0.4175994396209717},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.40804779529571533},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2770831286907196},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.2632066011428833},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.22585636377334595},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.16566252708435059},{"id":"https://openalex.org/C162853370","wikidata":"https://www.wikidata.org/wiki/Q39809","display_name":"Marketing","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C144133560","wikidata":"https://www.wikidata.org/wiki/Q4830453","display_name":"Business","level":0,"score":0.0}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/sibgrapi54419.2021.00025","is_oa":false,"landing_page_url":"https://doi.org/10.1109/sibgrapi54419.2021.00025","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 34th SIBGRAPI Conference on Graphics, Patterns and Images (SIBGRAPI)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"},{"id":"https://openalex.org/F4320320997","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","ror":"https://ror.org/02ddkpn78"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":48,"referenced_works":["https://openalex.org/W607316917","https://openalex.org/W639708223","https://openalex.org/W1522301498","https://openalex.org/W1641498739","https://openalex.org/W1901129140","https://openalex.org/W1903029394","https://openalex.org/W1992537691","https://openalex.org/W1999240723","https://openalex.org/W2006598173","https://openalex.org/W2016053056","https://openalex.org/W2028158228","https://openalex.org/W2031838824","https://openalex.org/W2039076665","https://openalex.org/W2046985712","https://openalex.org/W2049791419","https://openalex.org/W2068897382","https://openalex.org/W2081174759","https://openalex.org/W2112796928","https://openalex.org/W2117340355","https://openalex.org/W2123522966","https://openalex.org/W2131454745","https://openalex.org/W2146286023","https://openalex.org/W2153431246","https://openalex.org/W2163112810","https://openalex.org/W2163605009","https://openalex.org/W2166170436","https://openalex.org/W2172144775","https://openalex.org/W2194775991","https://openalex.org/W2309119811","https://openalex.org/W2346715948","https://openalex.org/W2471406153","https://openalex.org/W2592929672","https://openalex.org/W2618677231","https://openalex.org/W2794518994","https://openalex.org/W2929753309","https://openalex.org/W2962914239","https://openalex.org/W2963446712","https://openalex.org/W3038918411","https://openalex.org/W3160693705","https://openalex.org/W4301657140","https://openalex.org/W6620707391","https://openalex.org/W6631190155","https://openalex.org/W6639824700","https://openalex.org/W6684191040","https://openalex.org/W6744284096","https://openalex.org/W6761274798","https://openalex.org/W6780225684","https://openalex.org/W6794825017"],"related_works":["https://openalex.org/W2327340211","https://openalex.org/W2027542625","https://openalex.org/W4292199793","https://openalex.org/W2282195379","https://openalex.org/W2089784006","https://openalex.org/W2295388821","https://openalex.org/W2102312026","https://openalex.org/W2885663991","https://openalex.org/W2071433170","https://openalex.org/W2977327189"],"abstract_inverted_index":{"Pediatric":[0],"brain":[1,65,100,177],"MRI":[2,66],"is":[3],"a":[4,44,63,155,160,190],"useful":[5],"tool":[6],"in":[7,20,57,137,174],"assessing":[8],"the":[9,21,25,99,115,125,130,139,150,169,172,176,222],"healthy":[10],"cerebral":[11],"development":[12],"of":[13,27,36,46,70,81,84,104,127,171,194],"children.":[14],"Since":[15],"many":[16],"pathologies":[17,42],"may":[18],"manifest":[19],"brainstem":[22],"and":[23,74,87,96,141,145,167,184,214,234],"cerebellum,":[24],"objective":[26],"this":[28,58,165],"study":[29],"was":[30],"to":[31,51,153,198],"have":[32],"an":[33],"automated":[34],"segmentation":[35,67,73,116],"pediatric":[37,64],"posterior":[38],"fossa":[39],"structures.":[40],"These":[41],"include":[43],"myriad":[45],"etiologies":[47],"from":[48,124,129],"congenital":[49],"malformations":[50],"tumors,":[52],"which":[53],"are":[54,79,92],"very":[55],"prevalent":[56],"age":[59],"group.":[60],"We":[61,158],"propose":[62],"pipeline":[68,166],"composed":[69,80],"preprocessing,":[71],"semantic":[72],"post-processing":[75,135],"steps.":[76],"Segmentation":[77],"modules":[78],"two":[82],"ensembles":[83],"networks:":[85],"generalists":[86],"specialists.":[88],"The":[89,186],"generalist":[90,131,142],"networks":[91,111,143],"responsible":[93],"for":[94,106,118,221],"locating":[95],"roughly":[97],"segmenting":[98,175],"areas,":[101],"yielding":[102],"regions":[103,126],"interest":[105,128],"each":[107],"target":[108],"organ.":[109],"Specialist":[110],"can":[112],"then":[113],"improve":[114],"performance":[117],"underrepresented":[119],"organs":[120],"by":[121],"learning":[122],"only":[123,202],"networks.":[132],"At":[133],"last,":[134],"consists":[136],"merging":[138],"specialist":[140],"predictions,":[144],"performing":[146],"late":[147],"fusion":[148],"across":[149],"distinct":[151],"architectures":[152],"generate":[154],"final":[156],"prediction.":[157],"conduct":[159],"thorough":[161],"ablation":[162],"analysis":[163],"on":[164],"assess":[168],"superiority":[170],"methodology":[173,188],"stem,":[178],"4":[179],"<sup":[180],"xmlns:mml=\"http://www.w3.org/1998/Math/MathML\"":[181],"xmlns:xlink=\"http://www.w3.org/1999/xlink\">th</sup>":[182],"ventricle":[183],"cerebellum.":[185],"proposed":[187],"achieved":[189],"macro-averaged":[191],"Dice":[192],"index":[193],"0.855":[195],"with":[196,201],"respect":[197],"manual":[199],"segmentation,":[200],"32":[203],"labeled":[204,233],"volumes":[205],"used":[206],"during":[207],"training.":[208],"Additionally,":[209],"average":[210],"distances":[211],"between":[212,231],"automatically":[213],"manually":[215,232],"segmented":[216],"surfaces":[217],"remained":[218],"around":[219],"1mm":[220],"three":[223],"structures,":[224],"while":[225],"volumetry":[226],"results":[227],"revealed":[228],"high":[229],"agreement":[230],"predicted":[235],"regions.":[236]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1}],"updated_date":"2026-02-13T15:27:49.765798","created_date":"2025-10-10T00:00:00"}
