{"id":"https://openalex.org/W3202450964","doi":"https://doi.org/10.1109/segah52098.2021.9551857","title":"The Immersive Graph Genome Explorer: Navigating Genomics in Immersive Virtual Reality","display_name":"The Immersive Graph Genome Explorer: Navigating Genomics in Immersive Virtual Reality","publication_year":2021,"publication_date":"2021-08-04","ids":{"openalex":"https://openalex.org/W3202450964","doi":"https://doi.org/10.1109/segah52098.2021.9551857","mag":"3202450964"},"language":"en","primary_location":{"id":"doi:10.1109/segah52098.2021.9551857","is_oa":false,"landing_page_url":"https://doi.org/10.1109/segah52098.2021.9551857","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE 9th International Conference on Serious Games and Applications for Health(SeGAH)","raw_type":"proceedings-article"},"type":"article","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5061787650","display_name":"Maxim Kuznetsov","orcid":"https://orcid.org/0009-0003-8939-1705"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Maxim Kuznetsov","raw_affiliation_strings":["University of California, Santa Cruz,Jack Baskin School of Engineering,Department of Computational Media,Santa Cruz,CA,USA"],"affiliations":[{"raw_affiliation_string":"University of California, Santa Cruz,Jack Baskin School of Engineering,Department of Computational Media,Santa Cruz,CA,USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030186036","display_name":"Aviv Elor","orcid":"https://orcid.org/0000-0001-5356-3948"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Aviv Elor","raw_affiliation_strings":["University of California, Santa Cruz,Jack Baskin School of Engineering,Department of Computational Media,Santa Cruz,CA,USA"],"affiliations":[{"raw_affiliation_string":"University of California, Santa Cruz,Jack Baskin School of Engineering,Department of Computational Media,Santa Cruz,CA,USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075503920","display_name":"Sri Kurniawan","orcid":"https://orcid.org/0000-0003-0372-5800"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sri Kurniawan","raw_affiliation_strings":["University of California, Santa Cruz,Jack Baskin School of Engineering,Department of Computational Media,Santa Cruz,CA,USA"],"affiliations":[{"raw_affiliation_string":"University of California, Santa Cruz,Jack Baskin School of Engineering,Department of Computational Media,Santa Cruz,CA,USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010781995","display_name":"Colleen M. Bosworth","orcid":"https://orcid.org/0000-0001-6241-3554"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Colleen Bosworth","raw_affiliation_strings":["University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA"],"affiliations":[{"raw_affiliation_string":"University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006332789","display_name":"Yohei Rosen","orcid":"https://orcid.org/0000-0002-3870-2169"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yohei Rosen","raw_affiliation_strings":["University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA"],"affiliations":[{"raw_affiliation_string":"University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018480712","display_name":"Nicholas Heyer","orcid":"https://orcid.org/0000-0003-0113-4097"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nicholas Heyer","raw_affiliation_strings":["University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA"],"affiliations":[{"raw_affiliation_string":"University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014003862","display_name":"Mircea Teodorescu","orcid":"https://orcid.org/0000-0001-7085-5248"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mircea Teodorescu","raw_affiliation_strings":["University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA"],"affiliations":[{"raw_affiliation_string":"University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061203088","display_name":"Benedict Paten","orcid":"https://orcid.org/0000-0001-8863-3539"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Benedict Paten","raw_affiliation_strings":["University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA"],"affiliations":[{"raw_affiliation_string":"University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA","institution_ids":["https://openalex.org/I185103710"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090849321","display_name":"David Haussler","orcid":"https://orcid.org/0000-0003-1533-4575"},"institutions":[{"id":"https://openalex.org/I185103710","display_name":"University of California, Santa Cruz","ror":"https://ror.org/03s65by71","country_code":"US","type":"education","lineage":["https://openalex.org/I185103710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Haussler","raw_affiliation_strings":["University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA"],"affiliations":[{"raw_affiliation_string":"University of California, Santa Cruz,UC Santa Cruz Genomics Institute,Santa Cruz,CA,USA","institution_ids":["https://openalex.org/I185103710"]},{"raw_affiliation_string":"UC Santa Cruz Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA, USA","institution_ids":["https://openalex.org/I185103710"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5061787650"],"corresponding_institution_ids":["https://openalex.org/I185103710"],"apc_list":null,"apc_paid":null,"fwci":3.9925,"has_fulltext":false,"cited_by_count":15,"citation_normalized_percentile":{"value":0.93996442,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":null,"issue":null,"first_page":"1","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11197","display_name":"Digital Games and Media","score":0.9377999901771545,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11197","display_name":"Digital Games and Media","score":0.9377999901771545,"subfield":{"id":"https://openalex.org/subfields/3312","display_name":"Sociology and Political Science"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6414916515350342},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.6179085373878479},{"id":"https://openalex.org/keywords/virtual-reality","display_name":"Virtual reality","score":0.608817994594574},{"id":"https://openalex.org/keywords/usable","display_name":"USable","score":0.5654796361923218},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5559209585189819},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.53034907579422},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.4564613699913025},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.4280356466770172},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.2642050087451935},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.2564701437950134},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20999491214752197},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.1924917995929718},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.15935394167900085},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07503297924995422}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6414916515350342},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.6179085373878479},{"id":"https://openalex.org/C194969405","wikidata":"https://www.wikidata.org/wiki/Q170519","display_name":"Virtual reality","level":2,"score":0.608817994594574},{"id":"https://openalex.org/C2780615836","wikidata":"https://www.wikidata.org/wiki/Q2471869","display_name":"USable","level":2,"score":0.5654796361923218},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5559209585189819},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.53034907579422},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.4564613699913025},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.4280356466770172},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.2642050087451935},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.2564701437950134},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20999491214752197},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.1924917995929718},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15935394167900085},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07503297924995422}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/segah52098.2021.9551857","is_oa":false,"landing_page_url":"https://doi.org/10.1109/segah52098.2021.9551857","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2021 IEEE 9th International Conference on Serious Games and Applications for Health(SeGAH)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1851890251","display_name":null,"funder_award_id":"#2020-0000000146","funder_id":"https://openalex.org/F4320310688","funder_display_name":"Center for Information Technology Research in the Interest of Society"}],"funders":[{"id":"https://openalex.org/F4320310688","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":44,"referenced_works":["https://openalex.org/W38619841","https://openalex.org/W1544273448","https://openalex.org/W1842847600","https://openalex.org/W1961379460","https://openalex.org/W1984259444","https://openalex.org/W1996265628","https://openalex.org/W2007807048","https://openalex.org/W2031422433","https://openalex.org/W2043284163","https://openalex.org/W2052377591","https://openalex.org/W2060538865","https://openalex.org/W2074954154","https://openalex.org/W2083390520","https://openalex.org/W2089579563","https://openalex.org/W2095604271","https://openalex.org/W2116958202","https://openalex.org/W2128016314","https://openalex.org/W2153325555","https://openalex.org/W2156933902","https://openalex.org/W2158591705","https://openalex.org/W2158804744","https://openalex.org/W2163314583","https://openalex.org/W2166825456","https://openalex.org/W2294884930","https://openalex.org/W2603734366","https://openalex.org/W2765185461","https://openalex.org/W2768930763","https://openalex.org/W2788099780","https://openalex.org/W2788228074","https://openalex.org/W2796044615","https://openalex.org/W2799107789","https://openalex.org/W2909608117","https://openalex.org/W2950122868","https://openalex.org/W2950354111","https://openalex.org/W2964697169","https://openalex.org/W2965998663","https://openalex.org/W2988098904","https://openalex.org/W2996459132","https://openalex.org/W3022783334","https://openalex.org/W4239907424","https://openalex.org/W4251246996","https://openalex.org/W6601609194","https://openalex.org/W6674415941","https://openalex.org/W6750626991"],"related_works":["https://openalex.org/W3115771437","https://openalex.org/W4240558103","https://openalex.org/W2754277141","https://openalex.org/W4323060179","https://openalex.org/W2980234935","https://openalex.org/W1578960725","https://openalex.org/W2157759147","https://openalex.org/W3005985405","https://openalex.org/W1884167867","https://openalex.org/W3037587100"],"abstract_inverted_index":{"Genome":[0,103],"graphs,":[1],"a":[2,53,73],"new":[3],"frontier":[4],"of":[5,20,33,75,88],"genomics,":[6],"have":[7],"begun":[8],"to":[9,60],"redefine":[10],"how":[11],"we":[12,51,98],"approach":[13],"the":[14,30,93],"reference":[15],"genomes.":[16],"These":[17],"spatial":[18],"representations":[19],"genetic":[21,31],"variation":[22,91],"are":[23,36],"an":[24],"important":[25],"step":[26],"forward":[27],"in":[28,115],"capturing":[29],"diversity":[32],"life,":[34],"but":[35],"visually":[37],"challenged":[38],"by":[39],"highly":[40],"variable":[41],"regions.":[42],"To":[43],"make":[44],"complex":[45],"graph":[46,63],"genomes":[47],"usable":[48],"towards":[49],"visualization,":[50],"present":[52],"cross-platform":[54],"immersive":[55],"virtual":[56],"reality":[57],"(iVR)":[58],"system":[59],"enable":[61],"3DUI":[62],"genome":[64,90],"interaction":[65,78,110],"and":[66,84,106],"analysis.":[67],"We":[68],"explore":[69],"iVR":[70],"design":[71],"through":[72],"variety":[74],"graph-network":[76],"based":[77],"tools":[79],"developed":[80],"with":[81],"genomics":[82],"experts":[83],"discuss":[85],"our":[86,100],"implementations":[87],"visualizing":[89],"within":[92],"Unity":[94],"Game":[95],"Engine.":[96],"Lastly,":[97],"share":[99],"Immersive":[101],"Graph":[102],"Explorer":[104],"(IGGE)":[105],"reflect":[107],"on":[108],"iVR's":[109],"potential":[111],"for":[112],"serious":[113],"applications":[114],"genomics.":[116]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":5}],"updated_date":"2025-11-06T03:46:38.306776","created_date":"2025-10-10T00:00:00"}
