{"id":"https://openalex.org/W4309224943","doi":"https://doi.org/10.1109/niles56402.2022.9942410","title":"Unravelling Diabetes-related Pathways Using 16S rRNA Microbiome Data from Human Gut and Nasal Cavity","display_name":"Unravelling Diabetes-related Pathways Using 16S rRNA Microbiome Data from Human Gut and Nasal Cavity","publication_year":2022,"publication_date":"2022-10-22","ids":{"openalex":"https://openalex.org/W4309224943","doi":"https://doi.org/10.1109/niles56402.2022.9942410"},"language":"en","primary_location":{"id":"doi:10.1109/niles56402.2022.9942410","is_oa":false,"landing_page_url":"https://doi.org/10.1109/niles56402.2022.9942410","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 4th Novel Intelligent and Leading Emerging Sciences Conference (NILES)","raw_type":"proceedings-article"},"type":"conference-paper","indexed_in":["crossref"],"open_access":{"is_oa":false,"oa_status":"closed","oa_url":null,"any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5010333850","display_name":"Manar Rashad","orcid":null},"institutions":[{"id":"https://openalex.org/I57629906","display_name":"Nile University","ror":"https://ror.org/03cg7cp61","country_code":"EG","type":"education","lineage":["https://openalex.org/I57629906"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Manar Rashad","raw_affiliation_strings":["Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University,Giza,Egypt","Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University, Giza, Egypt"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University,Giza,Egypt","institution_ids":["https://openalex.org/I57629906"]},{"raw_affiliation_string":"Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University, Giza, Egypt","institution_ids":["https://openalex.org/I57629906"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100647515","display_name":"Mohamed Hamed","orcid":"https://orcid.org/0000-0002-4106-7426"},"institutions":[{"id":"https://openalex.org/I57629906","display_name":"Nile University","ror":"https://ror.org/03cg7cp61","country_code":"EG","type":"education","lineage":["https://openalex.org/I57629906"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Mohamed Hamed","raw_affiliation_strings":["Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University,Giza,Egypt","Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University, Giza, Egypt"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University,Giza,Egypt","institution_ids":["https://openalex.org/I57629906"]},{"raw_affiliation_string":"Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University, Giza, Egypt","institution_ids":["https://openalex.org/I57629906"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069484090","display_name":"Mohamed El-Hadidi","orcid":"https://orcid.org/0000-0002-0360-3654"},"institutions":[{"id":"https://openalex.org/I57629906","display_name":"Nile University","ror":"https://ror.org/03cg7cp61","country_code":"EG","type":"education","lineage":["https://openalex.org/I57629906"]}],"countries":["EG"],"is_corresponding":false,"raw_author_name":"Mohamed El-Hadidi","raw_affiliation_strings":["Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University,Giza,Egypt","Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University, Giza, Egypt"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University,Giza,Egypt","institution_ids":["https://openalex.org/I57629906"]},{"raw_affiliation_string":"Bioinformatics Group Center of Informatics Science (CIS), School of information Technology and Computer Science (ITCS) Nile University, Giza, Egypt","institution_ids":["https://openalex.org/I57629906"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I57629906"],"apc_list":null,"apc_paid":null,"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.19304229,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":null,"issue":null,"first_page":"62","last_page":"66"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10257","display_name":"Oral microbiology and periodontitis research","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/3506","display_name":"Periodontics"},"field":{"id":"https://openalex.org/fields/35","display_name":"Dentistry"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10866","display_name":"Nutritional Studies and Diet","score":0.9674000144004822,"subfield":{"id":"https://openalex.org/subfields/2739","display_name":"Public Health, Environmental and Occupational Health"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/prediabetes","display_name":"Prediabetes","score":0.7961238026618958},{"id":"https://openalex.org/keywords/microbiome","display_name":"Microbiome","score":0.777816653251648},{"id":"https://openalex.org/keywords/nasal-cavity","display_name":"Nasal cavity","score":0.7736492156982422},{"id":"https://openalex.org/keywords/gut-flora","display_name":"Gut flora","score":0.5940341353416443},{"id":"https://openalex.org/keywords/diabetes-mellitus","display_name":"Diabetes mellitus","score":0.5835702419281006},{"id":"https://openalex.org/keywords/pathogenesis","display_name":"Pathogenesis","score":0.5111179947853088},{"id":"https://openalex.org/keywords/gut-microbiome","display_name":"Gut microbiome","score":0.47487518191337585},{"id":"https://openalex.org/keywords/oral-cavity","display_name":"Oral cavity","score":0.4420342743396759},{"id":"https://openalex.org/keywords/human-microbiome","display_name":"Human microbiome","score":0.4127280116081238},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4106517434120178},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3955495357513428},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3734903633594513},{"id":"https://openalex.org/keywords/type-2-diabetes","display_name":"Type 2 diabetes","score":0.36900794506073},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.30935126543045044},{"id":"https://openalex.org/keywords/endocrinology","display_name":"Endocrinology","score":0.251539409160614},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.13360890746116638},{"id":"https://openalex.org/keywords/dentistry","display_name":"Dentistry","score":0.08945831656455994}],"concepts":[{"id":"https://openalex.org/C2779668308","wikidata":"https://www.wikidata.org/wiki/Q2087205","display_name":"Prediabetes","level":4,"score":0.7961238026618958},{"id":"https://openalex.org/C143121216","wikidata":"https://www.wikidata.org/wiki/Q1330402","display_name":"Microbiome","level":2,"score":0.777816653251648},{"id":"https://openalex.org/C2778801703","wikidata":"https://www.wikidata.org/wiki/Q156104","display_name":"Nasal cavity","level":2,"score":0.7736492156982422},{"id":"https://openalex.org/C539455810","wikidata":"https://www.wikidata.org/wiki/Q739734","display_name":"Gut flora","level":2,"score":0.5940341353416443},{"id":"https://openalex.org/C555293320","wikidata":"https://www.wikidata.org/wiki/Q12206","display_name":"Diabetes mellitus","level":2,"score":0.5835702419281006},{"id":"https://openalex.org/C2780942790","wikidata":"https://www.wikidata.org/wiki/Q372016","display_name":"Pathogenesis","level":2,"score":0.5111179947853088},{"id":"https://openalex.org/C3019978661","wikidata":"https://www.wikidata.org/wiki/Q739734","display_name":"Gut microbiome","level":3,"score":0.47487518191337585},{"id":"https://openalex.org/C2986629439","wikidata":"https://www.wikidata.org/wiki/Q9635","display_name":"Oral cavity","level":2,"score":0.4420342743396759},{"id":"https://openalex.org/C91478284","wikidata":"https://www.wikidata.org/wiki/Q6623796","display_name":"Human microbiome","level":3,"score":0.4127280116081238},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4106517434120178},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3955495357513428},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3734903633594513},{"id":"https://openalex.org/C2777180221","wikidata":"https://www.wikidata.org/wiki/Q3025883","display_name":"Type 2 diabetes","level":3,"score":0.36900794506073},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.30935126543045044},{"id":"https://openalex.org/C134018914","wikidata":"https://www.wikidata.org/wiki/Q162606","display_name":"Endocrinology","level":1,"score":0.251539409160614},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.13360890746116638},{"id":"https://openalex.org/C199343813","wikidata":"https://www.wikidata.org/wiki/Q12128","display_name":"Dentistry","level":1,"score":0.08945831656455994}],"mesh":[],"locations_count":1,"locations":[{"id":"doi:10.1109/niles56402.2022.9942410","is_oa":false,"landing_page_url":"https://doi.org/10.1109/niles56402.2022.9942410","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"2022 4th Novel Intelligent and Leading Emerging Sciences Conference (NILES)","raw_type":"proceedings-article"}],"best_oa_location":null,"sustainable_development_goals":[{"score":0.8199999928474426,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G8698755340","display_name":null,"funder_award_id":"Z57546888","funder_id":"https://openalex.org/F4320320875","funder_display_name":"Deutscher Akademischer Austauschdienst"}],"funders":[{"id":"https://openalex.org/F4320320875","display_name":"Deutscher Akademischer Austauschdienst","ror":"https://ror.org/039djdh30"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W1988925586","https://openalex.org/W2034285706","https://openalex.org/W2034532609","https://openalex.org/W2051954866","https://openalex.org/W2071841602","https://openalex.org/W2083483643","https://openalex.org/W2093252881","https://openalex.org/W2097107919","https://openalex.org/W2102730253","https://openalex.org/W2107940314","https://openalex.org/W2110082875","https://openalex.org/W2110300022","https://openalex.org/W2130731460","https://openalex.org/W2131186249","https://openalex.org/W2136520057","https://openalex.org/W2149284026","https://openalex.org/W2154026962","https://openalex.org/W2179438025","https://openalex.org/W2344543878","https://openalex.org/W2406250479","https://openalex.org/W2520432709","https://openalex.org/W2559588208","https://openalex.org/W2584311212","https://openalex.org/W2608515760","https://openalex.org/W2768883938","https://openalex.org/W2797413896","https://openalex.org/W2805282782","https://openalex.org/W2809122901","https://openalex.org/W2899309299","https://openalex.org/W2901413629","https://openalex.org/W2909202942","https://openalex.org/W2948018512","https://openalex.org/W2950746887","https://openalex.org/W2990249310","https://openalex.org/W2999175750","https://openalex.org/W3028595612","https://openalex.org/W3088375181","https://openalex.org/W3126757510","https://openalex.org/W4233562854","https://openalex.org/W4242364069","https://openalex.org/W4254965081","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2116128857","https://openalex.org/W2285022769","https://openalex.org/W2414156024","https://openalex.org/W4321115625","https://openalex.org/W3084006752","https://openalex.org/W2945745351","https://openalex.org/W4292226712","https://openalex.org/W4211112213","https://openalex.org/W2796671037","https://openalex.org/W3083446423"],"abstract_inverted_index":{"Type":[0],"2":[1],"Diabetes":[2],"(T2D)":[3],"is":[4,18,25,120,222],"a":[5],"complex":[6],"chronic":[7],"illness":[8],"that":[9,24,92,125],"affects":[10],"around":[11],"90%":[12],"of":[13,49,70,74,112,149,160,215],"diabetic":[14,59],"patients":[15,53],"worldwide.":[16],"Prediabetes":[17],"an":[19],"elementary":[20],"phase":[21],"for":[22,61],"T2D":[23],"recommended":[26],"to":[27,31,54,95,208,225],"be":[28],"early":[29],"diagnosed":[30],"prevent":[32],"its":[33],"progression.":[34],"In":[35,201],"this":[36],"study,":[37],"we":[38,87],"used":[39],"16S":[40],"rRNA":[41],"data":[42,148,183,192,205],"from":[43,146],"the":[44,67,83,90,110,117,127,141,147,158,171,177,181,189,196,203,213,219,226,230],"gut":[45,150,172,220],"and":[46,51,57,99,130,137,151,165,198],"nasal":[47,118,152,178,190,231],"cavity":[48,119,232],"prediabetic":[50,98,164,197],"control":[52,100,166,199],"identify":[55],"common":[56,143],"exclusive":[58],"pathways":[60,91,115,144,161],"each":[62],"body":[63],"site.":[64],"Furthermore,":[65],"using":[66],"Phylogenetic":[68],"Investigation":[69],"Communities":[71],"by":[72],"Reconstruction":[73],"Unobserved":[75],"States":[76],"(PICRUSt)":[77],"as":[78,80],"well":[79],"MicobiomeExplorer":[81],"in":[82,116,126,157,163,170,176,193],"pathway":[84],"enrichment":[85,162],"analysis,":[86],"also":[88],"identified":[89,145],"are":[93],"able":[94],"differentiate":[96],"between":[97,195],"patients.":[101,200],"Moreover,":[102,218],"our":[103],"study":[104],"highlights":[105],"some":[106],"important":[107],"aspects,":[108],"(1)":[109],"number":[111],"differentially":[113],"enriched":[114],"two":[121],"times":[122],"more":[123,168,223],"than":[124,175,188,229],"gut;":[128],"22":[129],"11":[131],"respectively,":[132],"(2)":[133],"Cardiac":[134],"muscle":[135],"contraction":[136],"Parkinson's":[138],"disease":[139],"were":[140],"only":[142],"cavity,":[153,179],"(3)":[154],"The":[155],"difference":[156],"values":[159],"was":[167],"explored":[169],"microbial":[173],"community":[174],"(4)":[180],"gut's":[182],"showed":[184],"higher":[185],"diagnostic":[186],"power":[187],"cavity's":[191],"differentiation":[194],"conclusion,":[202],"microbiome":[204,221],"could":[206],"lead":[207],"biologically":[209],"relevant":[210],"insights":[211],"on":[212],"progression":[214],"human":[216],"diseases.":[217],"susceptible":[224],"prediabetes":[227],"pathogenesis":[228],"microbiome.":[233]},"counts_by_year":[],"updated_date":"2026-07-29T14:22:42.915294","created_date":"2025-10-10T00:00:00"}
